RNA–Protein interactions for RNA: ENST00000585714.1

ABCA9-208, Transcript of ATP binding cassette subfamily A member 9, human

TSL 4

Gene ABCA9, Length 582 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA9-208	ENST00000585714	ATP2B4	P23634	1241 aa		9.29	□□□□□ -0.92
ABCA9-208	ENST00000585714	TEAD4	Q15561	434 aa		9.29	□□□□□ -0.92
ABCA9-208	ENST00000585714	C7orf43	Q8WVR3	580 aa		9.29	□□□□□ -0.92
ABCA9-208	ENST00000585714	HINFP	Q9BQA5	517 aa		9.29	□□□□□ -0.92
ABCA9-208	ENST00000585714	EML1	O00423	815 aa		9.28	□□□□□ -0.92
ABCA9-208	ENST00000585714	ITGB7	P26010	798 aa		9.28	□□□□□ -0.92
ABCA9-208	ENST00000585714	NOS2	P35228	1153 aa		9.28	□□□□□ -0.92
ABCA9-208	ENST00000585714	TBCEL	Q5QJ74	424 aa		9.28	□□□□□ -0.92
ABCA9-208	ENST00000585714	LRRC69	Q6ZNQ3	347 aa		9.28	□□□□□ -0.92
ABCA9-208	ENST00000585714	SLC9A9	Q8IVB4	645 aa		9.28	□□□□□ -0.92
ABCA9-208	ENST00000585714		Q8N3U1	123 aa		9.28	□□□□□ -0.92
ABCA9-208	ENST00000585714	TSEN2	Q8NCE0	465 aa	Known RBP	9.28	□□□□□ -0.92
ABCA9-208	ENST00000585714	PLVAP	Q9BX97	442 aa		9.28	□□□□□ -0.92
ABCA9-208	ENST00000585714	ELOA3C	A0A087WX78	387 aa	Predicted RBP	9.27	□□□□□ -0.93
ABCA9-208	ENST00000585714	ELOA3D	A6NLF2	546 aa	Predicted RBP	9.27	□□□□□ -0.93
ABCA9-208	ENST00000585714	ELOA3B	Q3SY89	546 aa		9.27	□□□□□ -0.93
ABCA9-208	ENST00000585714	SYT9	Q86SS6	491 aa		9.27	□□□□□ -0.93
ABCA9-208	ENST00000585714	TNS4	Q8IZW8	715 aa		9.27	□□□□□ -0.93
ABCA9-208	ENST00000585714	ELOA3	Q8NG57	546 aa		9.27	□□□□□ -0.93
ABCA9-208	ENST00000585714	PRMT3	O60678	531 aa		9.26	□□□□□ -0.93
ABCA9-208	ENST00000585714	OCLN	Q16625	522 aa		9.26	□□□□□ -0.93
ABCA9-208	ENST00000585714	SH3PXD2A	Q5TCZ1	1133 aa		9.26	□□□□□ -0.93
ABCA9-208	ENST00000585714	PRIMPOL	Q96LW4	560 aa		9.26	□□□□□ -0.93
ABCA9-208	ENST00000585714	GZF1	Q9H116	711 aa	Predicted RBP	9.26	□□□□□ -0.93
ABCA9-208	ENST00000585714	GNE	Q9Y223	722 aa	Known RBP	9.26	□□□□□ -0.93
ABCA9-208	ENST00000585714	IVNS1ABP	Q9Y6Y0	642 aa		9.26	□□□□□ -0.93
ABCA9-208	ENST00000585714	TXNDC2	Q86VQ3	553 aa		9.25	□□□□□ -0.93
ABCA9-208	ENST00000585714	CXXC1	Q9P0U4	656 aa	Predicted RBP	9.25	□□□□□ -0.93
ABCA9-208	ENST00000585714	LGR5	O75473	907 aa		9.24	□□□□□ -0.93
ABCA9-208	ENST00000585714	SPATA31C1	P0DKV0	1188 aa		9.24	□□□□□ -0.93
ABCA9-208	ENST00000585714	ARID4A	P29374	1257 aa	Predicted RBP	9.24	□□□□□ -0.93
ABCA9-208	ENST00000585714	WEE1	P30291	646 aa		9.24	□□□□□ -0.93
ABCA9-208	ENST00000585714	SFSWAP	Q12872	951 aa	Known RBP	9.24	□□□□□ -0.93
ABCA9-208	ENST00000585714	DOC2B	Q14184	412 aa		9.24	□□□□□ -0.93
ABCA9-208	ENST00000585714	SLC30A3	Q99726	388 aa		9.24	□□□□□ -0.93
ABCA9-208	ENST00000585714	ZNF232	Q9UNY5	417 aa		9.24	□□□□□ -0.93
ABCA9-208	ENST00000585714	SIN3B	O75182	1162 aa		9.23	□□□□□ -0.93
ABCA9-208	ENST00000585714	CCER1	Q8TC90	406 aa	Predicted RBP	9.23	□□□□□ -0.93
ABCA9-208	ENST00000585714	GPC6	Q9Y625	555 aa	Predicted RBP	9.23	□□□□□ -0.93
ABCA9-208	ENST00000585714	SERTM1	A2A2V5	107 aa		9.22	□□□□□ -0.93
ABCA9-208	ENST00000585714	ADARB2-AS1	A8MUL3	147 aa		9.22	□□□□□ -0.93
ABCA9-208	ENST00000585714	ALAS2	P22557	587 aa		9.22	□□□□□ -0.93
ABCA9-208	ENST00000585714	COL9A3	Q14050	684 aa	Predicted RBP	9.22	□□□□□ -0.93
ABCA9-208	ENST00000585714	STARD13	Q9Y3M8	1113 aa		9.22	□□□□□ -0.93
ABCA9-208	ENST00000585714	IGFBP4	P22692	258 aa		9.21	□□□□□ -0.94
ABCA9-208	ENST00000585714	TNFRSF25	Q93038	417 aa		9.21	□□□□□ -0.94
ABCA9-208	ENST00000585714	SEMA6B	Q9H3T3	888 aa		9.21	□□□□□ -0.94
ABCA9-208	ENST00000585714	GATA4	P43694	442 aa		9.2	□□□□□ -0.94
ABCA9-208	ENST00000585714	POTEA	Q6S8J7	498 aa		9.2	□□□□□ -0.94
ABCA9-208	ENST00000585714	GAS2L2	Q8NHY3	880 aa		9.2	□□□□□ -0.94
ABCA9-208	ENST00000585714	RHPN1	Q8TCX5	695 aa		9.2	□□□□□ -0.94
ABCA9-208	ENST00000585714	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	9.2	□□□□□ -0.94
ABCA9-208	ENST00000585714	NEUROD4	Q9HD90	331 aa		9.2	□□□□□ -0.94
ABCA9-208	ENST00000585714	ATAD2	Q6PL18	1390 aa		9.2	□□□□□ -0.94
ABCA9-208	ENST00000585714		M0R082	166 aa		9.19	□□□□□ -0.94
ABCA9-208	ENST00000585714	SCNN1A	P37088	669 aa		9.19	□□□□□ -0.94
ABCA9-208	ENST00000585714	SPEM2	Q0P670	501 aa		9.19	□□□□□ -0.94
ABCA9-208	ENST00000585714	ZNF417	Q8TAU3	575 aa		9.19	□□□□□ -0.94
ABCA9-208	ENST00000585714	SCG3	Q8WXD2	468 aa	Known RBP	9.19	□□□□□ -0.94
ABCA9-208	ENST00000585714	HSH2D	Q96JZ2	352 aa		9.19	□□□□□ -0.94
ABCA9-208	ENST00000585714	ZNF587	Q96SQ5	575 aa	Predicted RBP	9.19	□□□□□ -0.94
ABCA9-208	ENST00000585714	MTMR7	Q9Y216	660 aa		9.19	□□□□□ -0.94
ABCA9-208	ENST00000585714	FOXO3	O43524	673 aa		9.18	□□□□□ -0.94
ABCA9-208	ENST00000585714	C21orf2	O43822	256 aa		9.18	□□□□□ -0.94
ABCA9-208	ENST00000585714	ALB	P02768	609 aa		9.18	□□□□□ -0.94
ABCA9-208	ENST00000585714	HIRA	P54198	1017 aa	Predicted RBP	9.18	□□□□□ -0.94
ABCA9-208	ENST00000585714	PSMA6	P60900	246 aa	Known RBP	9.18	□□□□□ -0.94
ABCA9-208	ENST00000585714	FKBP5	Q13451	457 aa	Predicted RBP	9.18	□□□□□ -0.94
ABCA9-208	ENST00000585714	TMCO4	Q5TGY1	634 aa		9.18	□□□□□ -0.94
ABCA9-208	ENST00000585714	C1orf53	Q5VUE5	145 aa		9.18	□□□□□ -0.94
ABCA9-208	ENST00000585714	C8orf86	Q6ZUL3	223 aa		9.18	□□□□□ -0.94
ABCA9-208	ENST00000585714	RAB44	Q7Z6P3	723 aa	Predicted RBP	9.18	□□□□□ -0.94
ABCA9-208	ENST00000585714	PRDM6	Q9NQX0	595 aa		9.18	□□□□□ -0.94
ABCA9-208	ENST00000585714	CCDC9	Q9Y3X0	531 aa	Known RBP	9.18	□□□□□ -0.94
ABCA9-208	ENST00000585714	SPDYE3	A6NKU9	549 aa		9.17	□□□□□ -0.94
ABCA9-208	ENST00000585714	FAM229A	H3BQW9	127 aa		9.17	□□□□□ -0.94
ABCA9-208	ENST00000585714	PRRT3	Q5FWE3	981 aa		9.17	□□□□□ -0.94
ABCA9-208	ENST00000585714	MICALL1	Q8N3F8	863 aa		9.17	□□□□□ -0.94
ABCA9-208	ENST00000585714	HCN4	Q9Y3Q4	1203 aa		9.17	□□□□□ -0.94
ABCA9-208	ENST00000585714	ADH7	P40394	386 aa		9.16	□□□□□ -0.94
ABCA9-208	ENST00000585714	RSPO4	Q2I0M5	234 aa	Predicted RBP	9.16	□□□□□ -0.94
ABCA9-208	ENST00000585714	SND1	Q7KZF4	910 aa	Known RBP eCLIP	9.16	□□□□□ -0.94
ABCA9-208	ENST00000585714	ZNF280C	Q8ND82	737 aa		9.16	□□□□□ -0.94
ABCA9-208	ENST00000585714	PHACTR1	Q9C0D0	580 aa		9.16	□□□□□ -0.94
ABCA9-208	ENST00000585714	BRD7	Q9NPI1	651 aa		9.16	□□□□□ -0.94
ABCA9-208	ENST00000585714	PPP1R12B	O60237	982 aa	Predicted RBP	9.15	□□□□□ -0.94
ABCA9-208	ENST00000585714	PTCD1	O75127	700 aa	Known RBP	9.15	□□□□□ -0.94
ABCA9-208	ENST00000585714	NID1	P14543	1247 aa		9.15	□□□□□ -0.94
ABCA9-208	ENST00000585714	SERPINB4	P48594	390 aa		9.15	□□□□□ -0.94
ABCA9-208	ENST00000585714	KCNQ4	P56696	695 aa		9.15	□□□□□ -0.94
ABCA9-208	ENST00000585714	TYRO3	Q06418	890 aa		9.15	□□□□□ -0.94
ABCA9-208	ENST00000585714	STAG2	Q8N3U4	1231 aa		9.15	□□□□□ -0.94
ABCA9-208	ENST00000585714	COL26A1	Q96A83	441 aa		9.15	□□□□□ -0.94
ABCA9-208	ENST00000585714	CEP63	Q96MT8	703 aa		9.15	□□□□□ -0.94
ABCA9-208	ENST00000585714	NKAPL	Q5M9Q1	402 aa		9.14	□□□□□ -0.95
ABCA9-208	ENST00000585714	C20orf204	Q6ZNR8	217 aa		9.14	□□□□□ -0.95
ABCA9-208	ENST00000585714	SUSD3	Q96L08	255 aa		9.14	□□□□□ -0.95
ABCA9-208	ENST00000585714	MKNK1	Q9BUB5	465 aa		9.14	□□□□□ -0.95
ABCA9-208	ENST00000585714	TPSG1	Q9NRR2	321 aa		9.14	□□□□□ -0.95
ABCA9-208	ENST00000585714	SEPT3	Q9UH03	358 aa		9.14	□□□□□ -0.95

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms