RNA–Protein interactions for RNA: ENST00000584866.1

NDEL1-218, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-218ENST00000584866 TNRC6CQ9HCJ0 1690 aaKnown RBP25.45■■□□□ 1.66
NDEL1-218ENST00000584866 LMNB1P20700 586 aa25.44■■□□□ 1.66
NDEL1-218ENST00000584866 SLC10A5Q5PT55 438 aa25.44■■□□□ 1.66
NDEL1-218ENST00000584866 ARFGEF2Q9Y6D5 1785 aa25.44■■□□□ 1.66
NDEL1-218ENST00000584866 ALDH1B1P30837 517 aa25.43■■□□□ 1.66
NDEL1-218ENST00000584866 PHAXQ9H814 394 aaKnown RBP25.43■■□□□ 1.66
NDEL1-218ENST00000584866 ANKRD36CQ5JPF3 1778 aa25.43■■□□□ 1.66
NDEL1-218ENST00000584866 C1QTNF8P60827 252 aa25.42■■□□□ 1.66
NDEL1-218ENST00000584866 CCDC30Q5VVM6 783 aa25.42■■□□□ 1.66
NDEL1-218ENST00000584866 ISCA1Q9BUE6 129 aa25.42■■□□□ 1.66
NDEL1-218ENST00000584866 CHMP4AQ9BY43 222 aa25.42■■□□□ 1.66
NDEL1-218ENST00000584866 CACNA1SQ13698 1873 aa25.42■■□□□ 1.66
NDEL1-218ENST00000584866 FER1L6Q2WGJ9 1857 aa25.41■■□□□ 1.66
NDEL1-218ENST00000584866 HOXA10P31260 410 aaPredicted RBP25.41■■□□□ 1.66
NDEL1-218ENST00000584866 SOGA3Q5TF21 947 aa25.41■■□□□ 1.66
NDEL1-218ENST00000584866 C3orf67Q6ZVT6 689 aa25.41■■□□□ 1.66
NDEL1-218ENST00000584866 RNF123Q5XPI4 1314 aa25.4■■□□□ 1.66
NDEL1-218ENST00000584866 SYNE4Q8N205 404 aa25.39■■□□□ 1.66
NDEL1-218ENST00000584866 NLRP3Q96P20 1036 aa25.39■■□□□ 1.66
NDEL1-218ENST00000584866 LTBP3Q9NS15 1303 aa25.38■■□□□ 1.65
NDEL1-218ENST00000584866 KIF3CO14782 793 aa25.38■■□□□ 1.65
NDEL1-218ENST00000584866 TWISTNBQ3B726 338 aaPredicted RBP25.38■■□□□ 1.65
NDEL1-218ENST00000584866 TRMT112Q9UI30 125 aaKnown RBP25.38■■□□□ 1.65
NDEL1-218ENST00000584866 FANCIQ9NVI1 1328 aa25.37■■□□□ 1.65
NDEL1-218ENST00000584866 CCDC88AQ3V6T2 1871 aa25.37■■□□□ 1.65
NDEL1-218ENST00000584866 ATP5J2-PTCD1G3V325 749 aa25.37■■□□□ 1.65
NDEL1-218ENST00000584866 TRIM28Q13263 835 aaKnown RBP25.37■■□□□ 1.65
NDEL1-218ENST00000584866 CCDC93Q567U6 631 aa25.37■■□□□ 1.65
NDEL1-218ENST00000584866 RIC3Q7Z5B4 369 aa25.37■■□□□ 1.65
NDEL1-218ENST00000584866 RPGRQ92834 1020 aaKnown RBP25.37■■□□□ 1.65
NDEL1-218ENST00000584866 TAOK3Q9H2K8 898 aa25.37■■□□□ 1.65
NDEL1-218ENST00000584866 SPINK5Q9NQ38 1064 aaPredicted RBP25.37■■□□□ 1.65
NDEL1-218ENST00000584866 ZC3H4Q9UPT8 1303 aaKnown RBP25.37■■□□□ 1.65
NDEL1-218ENST00000584866 GOLGA2Q08379 1002 aa25.36■■□□□ 1.65
NDEL1-218ENST00000584866 OLFM4Q6UX06 510 aa25.36■■□□□ 1.65
NDEL1-218ENST00000584866 CRAMP1Q96RY5 1269 aa25.36■■□□□ 1.65
NDEL1-218ENST00000584866 HCLS1P14317 486 aaPredicted RBP25.35■■□□□ 1.65
NDEL1-218ENST00000584866 RBM17Q96I25 401 aaKnown RBP25.35■■□□□ 1.65
NDEL1-218ENST00000584866 SH3TC1Q8TE82 1336 aa25.35■■□□□ 1.65
NDEL1-218ENST00000584866 TCERG1O14776 1098 aaKnown RBP25.34■■□□□ 1.65
NDEL1-218ENST00000584866 ZNF428Q96B54 188 aa25.34■■□□□ 1.65
NDEL1-218ENST00000584866 NMRK2Q9NPI5 230 aa25.34■■□□□ 1.65
NDEL1-218ENST00000584866 VAMP4O75379 141 aa25.32■■□□□ 1.64
NDEL1-218ENST00000584866 EXOSC9Q06265 439 aaKnown RBP25.32■■□□□ 1.64
NDEL1-218ENST00000584866 RTKN2Q8IZC4 609 aa25.32■■□□□ 1.64
NDEL1-218ENST00000584866 SNED1Q8TER0 1413 aa25.31■■□□□ 1.64
NDEL1-218ENST00000584866 FKBP4Q02790 459 aaKnown RBP eCLIP25.31■■□□□ 1.64
NDEL1-218ENST00000584866 FAM89AQ96GI7 184 aa25.31■■□□□ 1.64
NDEL1-218ENST00000584866 STK31Q9BXU1 1019 aa25.31■■□□□ 1.64
NDEL1-218ENST00000584866 KDM2BQ8NHM5 1336 aa25.31■■□□□ 1.64
NDEL1-218ENST00000584866 ZNF521Q96K83 1311 aa25.31■■□□□ 1.64
NDEL1-218ENST00000584866 DICER1Q9UPY3 1922 aaKnown RBP25.3■■□□□ 1.64
NDEL1-218ENST00000584866 CCER2I3L3R5 266 aa25.3■■□□□ 1.64
NDEL1-218ENST00000584866 DDX58O95786 925 aaKnown RBP25.3■■□□□ 1.64
NDEL1-218ENST00000584866 CC2D2BQ6DHV5 1058 aa25.3■■□□□ 1.64
NDEL1-218ENST00000584866 G2E3Q7L622 706 aa25.3■■□□□ 1.64
NDEL1-218ENST00000584866 MYD88Q99836 296 aa25.3■■□□□ 1.64
NDEL1-218ENST00000584866 METTL22Q9BUU2 404 aaPredicted RBP25.3■■□□□ 1.64
NDEL1-218ENST00000584866 GLTPD2A6NH11 291 aa25.29■■□□□ 1.64
NDEL1-218ENST00000584866 SLC4A2P04920 1241 aa25.29■■□□□ 1.64
NDEL1-218ENST00000584866 KSR2Q6VAB6 950 aa25.28■■□□□ 1.64
NDEL1-218ENST00000584866 MAP3K2Q9Y2U5 619 aa25.28■■□□□ 1.64
NDEL1-218ENST00000584866 ABCC4O15439 1325 aa25.28■■□□□ 1.64
NDEL1-218ENST00000584866 LAMB2P55268 1798 aa25.28■■□□□ 1.64
NDEL1-218ENST00000584866 TIAM2Q8IVF5 1701 aa25.27■■□□□ 1.64
NDEL1-218ENST00000584866 PI4KAP2A4QPH2 592 aa25.27■■□□□ 1.64
NDEL1-218ENST00000584866 PPEF1O14829 653 aaPredicted RBP25.27■■□□□ 1.64
NDEL1-218ENST00000584866 SLC51AQ86UW1 340 aa25.27■■□□□ 1.64
NDEL1-218ENST00000584866 PI4KAP1Q8N8J0 262 aa25.27■■□□□ 1.64
NDEL1-218ENST00000584866 CCDC191Q8NCU4 936 aa25.27■■□□□ 1.64
NDEL1-218ENST00000584866 MYH16Q9H6N6 1097 aa25.27■■□□□ 1.64
NDEL1-218ENST00000584866 RRAGCQ9HB90 399 aa25.27■■□□□ 1.64
NDEL1-218ENST00000584866 ZNF277Q9NRM2 450 aaPredicted RBP25.27■■□□□ 1.64
NDEL1-218ENST00000584866 ZBTB38Q8NAP3 1195 aaPredicted RBP25.26■■□□□ 1.63
NDEL1-218ENST00000584866 PSMD1Q99460 953 aa25.26■■□□□ 1.63
NDEL1-218ENST00000584866 BBOX1O75936 387 aa25.25■■□□□ 1.63
NDEL1-218ENST00000584866 SF3B3Q15393 1217 aaKnown RBP25.25■■□□□ 1.63
NDEL1-218ENST00000584866 RTL5Q5HYW3 569 aaPredicted RBP25.25■■□□□ 1.63
NDEL1-218ENST00000584866 DDX60Q8IY21 1712 aaKnown RBP25.25■■□□□ 1.63
NDEL1-218ENST00000584866 IRS4O14654 1257 aaPredicted RBP25.24■■□□□ 1.63
NDEL1-218ENST00000584866 TOMM70O94826 608 aa25.24■■□□□ 1.63
NDEL1-218ENST00000584866 GRIPAP1Q4V328 841 aa25.24■■□□□ 1.63
NDEL1-218ENST00000584866 DDX46Q7L014 1031 aaKnown RBP25.24■■□□□ 1.63
NDEL1-218ENST00000584866 CWC25Q9NXE8 425 aaPredicted RBP25.24■■□□□ 1.63
NDEL1-218ENST00000584866 ATP6V0A2Q9Y487 856 aa25.24■■□□□ 1.63
NDEL1-218ENST00000584866 IGKV5-2P06315 115 aa25.23■■□□□ 1.63
NDEL1-218ENST00000584866 IARSP41252 1262 aaKnown RBP25.23■■□□□ 1.63
NDEL1-218ENST00000584866 DPY19L2Q6NUT2 758 aa25.23■■□□□ 1.63
NDEL1-218ENST00000584866 PCCAP05165 728 aaPredicted RBP25.22■■□□□ 1.63
NDEL1-218ENST00000584866 FLIIQ13045 1269 aa25.22■■□□□ 1.63
NDEL1-218ENST00000584866 GRAPQ13588 217 aa25.22■■□□□ 1.63
NDEL1-218ENST00000584866 GRAPLQ8TC17 118 aaPredicted RBP25.22■■□□□ 1.63
NDEL1-218ENST00000584866 SP8Q8IXZ3 490 aa25.21■■□□□ 1.63
NDEL1-218ENST00000584866 POTECB2RU33 542 aa25.2■■□□□ 1.62
NDEL1-218ENST00000584866 JARID2Q92833 1246 aaPredicted RBP25.2■■□□□ 1.62
NDEL1-218ENST00000584866 CACNA1FO60840 1977 aa25.19■■□□□ 1.62
NDEL1-218ENST00000584866 TAF1P21675 1872 aa25.18■■□□□ 1.62
NDEL1-218ENST00000584866 DDNO94850 711 aaPredicted RBP25.18■■□□□ 1.62
NDEL1-218ENST00000584866 VEGFAP15692 232 aaPredicted RBP25.18■■□□□ 1.62
NDEL1-218ENST00000584866 NEXNQ0ZGT2 675 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms