RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 TAF7Q15545 349 aaPredicted RBP17.77■□□□□ 0.44
COPS3-218ENST00000584216 TMX4Q9H1E5 349 aaPredicted RBP17.77■□□□□ 0.44
COPS3-218ENST00000584216 NEFMP07197 916 aa17.76■□□□□ 0.43
COPS3-218ENST00000584216 HLFQ16534 295 aa17.76■□□□□ 0.43
COPS3-218ENST00000584216 KIF6Q6ZMV9 814 aa17.76■□□□□ 0.43
COPS3-218ENST00000584216 LARGE2Q8N3Y3 721 aa17.76■□□□□ 0.43
COPS3-218ENST00000584216 PNISRQ8TF01 805 aaKnown RBP17.76■□□□□ 0.43
COPS3-218ENST00000584216 ABHD8Q96I13 439 aa17.76■□□□□ 0.43
COPS3-218ENST00000584216 IBTKQ9P2D0 1353 aaPredicted RBP17.76■□□□□ 0.43
COPS3-218ENST00000584216 RIC1Q4ADV7 1423 aa17.75■□□□□ 0.43
COPS3-218ENST00000584216 SNED1Q8TER0 1413 aa17.75■□□□□ 0.43
COPS3-218ENST00000584216 HOXA10P31260 410 aaPredicted RBP17.75■□□□□ 0.43
COPS3-218ENST00000584216 PAXIP1Q6ZW49 1069 aaPredicted RBP17.75■□□□□ 0.43
COPS3-218ENST00000584216 USP50Q70EL3 339 aaPredicted RBP17.75■□□□□ 0.43
COPS3-218ENST00000584216 RBM17Q96I25 401 aaKnown RBP17.75■□□□□ 0.43
COPS3-218ENST00000584216 NUTM1Q86Y26 1132 aa17.74■□□□□ 0.43
COPS3-218ENST00000584216 NIM1KQ8IY84 436 aa17.74■□□□□ 0.43
COPS3-218ENST00000584216 ABCC12Q96J65 1359 aa17.74■□□□□ 0.43
COPS3-218ENST00000584216 MAP3K15Q6ZN16 1313 aa17.73■□□□□ 0.43
COPS3-218ENST00000584216 DCTN1Q14203 1278 aa17.73■□□□□ 0.43
COPS3-218ENST00000584216 CAPNS2Q96L46 248 aa17.73■□□□□ 0.43
COPS3-218ENST00000584216 CRAMP1Q96RY5 1269 aa17.73■□□□□ 0.43
COPS3-218ENST00000584216 PPEF1O14829 653 aaPredicted RBP17.72■□□□□ 0.43
COPS3-218ENST00000584216 SCNN1DP51172 638 aa17.72■□□□□ 0.43
COPS3-218ENST00000584216 NGEFQ8N5V2 710 aa17.72■□□□□ 0.43
COPS3-218ENST00000584216 GPR101Q96P66 508 aaPredicted RBP17.72■□□□□ 0.43
COPS3-218ENST00000584216 VPS33BQ9H267 617 aa17.72■□□□□ 0.43
COPS3-218ENST00000584216 EPS15P42566 896 aa17.71■□□□□ 0.43
COPS3-218ENST00000584216 MAP2K2P36507 400 aa17.7■□□□□ 0.42
COPS3-218ENST00000584216 PPP1R42Q7Z4L9 355 aa17.7■□□□□ 0.42
COPS3-218ENST00000584216 ADARB2Q9NS39 739 aaKnown RBP17.7■□□□□ 0.42
COPS3-218ENST00000584216 TLL2Q9Y6L7 1015 aa17.7■□□□□ 0.42
COPS3-218ENST00000584216 THSD7BQ9C0I4 1608 aa17.69■□□□□ 0.42
COPS3-218ENST00000584216 LAMB4A4D0S4 1761 aa17.69■□□□□ 0.42
COPS3-218ENST00000584216 PPIP5K2O43314 1243 aa17.69■□□□□ 0.42
COPS3-218ENST00000584216 CA12O43570 354 aa17.69■□□□□ 0.42
COPS3-218ENST00000584216 GRM1Q13255 1194 aa17.69■□□□□ 0.42
COPS3-218ENST00000584216 FAM161AQ3B820 660 aa17.69■□□□□ 0.42
COPS3-218ENST00000584216 CYP4F22Q6NT55 531 aa17.69■□□□□ 0.42
COPS3-218ENST00000584216 SUPT20HQ8NEM7 779 aa17.69■□□□□ 0.42
COPS3-218ENST00000584216 RRP7AQ9Y3A4 280 aaKnown RBP17.69■□□□□ 0.42
COPS3-218ENST00000584216 GPTP24298 496 aa17.68■□□□□ 0.42
COPS3-218ENST00000584216 PPP2R1AP30153 589 aa17.68■□□□□ 0.42
COPS3-218ENST00000584216 PARP10Q53GL7 1025 aa17.68■□□□□ 0.42
COPS3-218ENST00000584216 NLRP3Q96P20 1036 aa17.68■□□□□ 0.42
COPS3-218ENST00000584216 MIS18AQ9NYP9 233 aa17.68■□□□□ 0.42
COPS3-218ENST00000584216 ERBB4Q15303 1308 aa17.68■□□□□ 0.42
COPS3-218ENST00000584216 CCDC85CA6NKD9 419 aa17.67■□□□□ 0.42
COPS3-218ENST00000584216 SLC34A2O95436 690 aa17.67■□□□□ 0.42
COPS3-218ENST00000584216 MYL6BP14649 208 aa17.67■□□□□ 0.42
COPS3-218ENST00000584216 SUSD4Q5VX71 490 aa17.67■□□□□ 0.42
COPS3-218ENST00000584216 TTLL7Q6ZT98 887 aa17.67■□□□□ 0.42
COPS3-218ENST00000584216 ZBTB3Q9H5J0 574 aa17.67■□□□□ 0.42
COPS3-218ENST00000584216 GPRC5DQ9NZD1 345 aa17.67■□□□□ 0.42
COPS3-218ENST00000584216 COL4A5P29400 1685 aa17.67■□□□□ 0.42
COPS3-218ENST00000584216 UBN2Q6ZU65 1347 aa17.67■□□□□ 0.42
COPS3-218ENST00000584216 CDHR2Q9BYE9 1310 aa17.67■□□□□ 0.42
COPS3-218ENST00000584216 TCERG1O14776 1098 aaKnown RBP17.66■□□□□ 0.42
COPS3-218ENST00000584216 NTSR2O95665 410 aa17.66■□□□□ 0.42
COPS3-218ENST00000584216 EIF4A1P60842 406 aaKnown RBP17.66■□□□□ 0.42
COPS3-218ENST00000584216 MLLT1Q03111 559 aaPredicted RBP17.66■□□□□ 0.42
COPS3-218ENST00000584216 CST9Q5W186 159 aa17.66■□□□□ 0.42
COPS3-218ENST00000584216 GIGYF2Q6Y7W6 1299 aaKnown RBP17.66■□□□□ 0.42
COPS3-218ENST00000584216 ZNF34Q8IZ26 560 aa17.66■□□□□ 0.42
COPS3-218ENST00000584216 HHIPL1Q96JK4 782 aa17.66■□□□□ 0.42
COPS3-218ENST00000584216 ZNRF3Q9ULT6 936 aa17.66■□□□□ 0.42
COPS3-218ENST00000584216 ATP6V0A2Q9Y487 856 aa17.66■□□□□ 0.42
COPS3-218ENST00000584216 LTBP1Q14766 1721 aa17.66■□□□□ 0.42
COPS3-218ENST00000584216 TRAF5O00463 557 aa17.65■□□□□ 0.42
COPS3-218ENST00000584216 AOC3Q16853 763 aa17.65■□□□□ 0.42
COPS3-218ENST00000584216 CELF2O95319 508 aaKnown RBP17.64■□□□□ 0.41
COPS3-218ENST00000584216 FMR1Q06787 632 aaKnown RBP eCLIP17.64■□□□□ 0.41
COPS3-218ENST00000584216 SAPCD2Q86UD0 394 aa17.64■□□□□ 0.41
COPS3-218ENST00000584216 ZC3H15Q8WU90 426 aaKnown RBP17.64■□□□□ 0.41
COPS3-218ENST00000584216 PNNQ9H307 717 aaKnown RBP17.64■□□□□ 0.41
COPS3-218ENST00000584216 BRPF1P55201 1214 aaPredicted RBP17.63■□□□□ 0.41
COPS3-218ENST00000584216 TNIP1Q15025 636 aa17.63■□□□□ 0.41
COPS3-218ENST00000584216 UTP14AQ9BVJ6 771 aaKnown RBP17.63■□□□□ 0.41
COPS3-218ENST00000584216 RTFDC1Q9BY42 306 aaPredicted RBP17.63■□□□□ 0.41
COPS3-218ENST00000584216 BBOX1O75936 387 aa17.62■□□□□ 0.41
COPS3-218ENST00000584216 RGS19P49795 217 aa17.62■□□□□ 0.41
COPS3-218ENST00000584216 CXCL9Q07325 125 aa17.62■□□□□ 0.41
COPS3-218ENST00000584216 CIAPIN1Q6FI81 312 aa17.62■□□□□ 0.41
COPS3-218ENST00000584216 DPP8Q6V1X1 898 aaPredicted RBP17.62■□□□□ 0.41
COPS3-218ENST00000584216 BCL2L13Q9BXK5 485 aa17.62■□□□□ 0.41
COPS3-218ENST00000584216 AOC2O75106 756 aa17.61■□□□□ 0.41
COPS3-218ENST00000584216 GMPSP49915 693 aaPredicted RBP17.61■□□□□ 0.41
COPS3-218ENST00000584216 SLC10A5Q5PT55 438 aa17.61■□□□□ 0.41
COPS3-218ENST00000584216 ABCC4O15439 1325 aa17.61■□□□□ 0.41
COPS3-218ENST00000584216 KDM3BQ7LBC6 1761 aa17.61■□□□□ 0.41
COPS3-218ENST00000584216 KIAA2012Q0VF49 1180 aa17.6■□□□□ 0.41
COPS3-218ENST00000584216 NFE2L2Q16236 605 aa17.6■□□□□ 0.41
COPS3-218ENST00000584216 HSP90AB3PQ58FF7 597 aa17.6■□□□□ 0.41
COPS3-218ENST00000584216 C3orf67Q6ZVT6 689 aa17.6■□□□□ 0.41
COPS3-218ENST00000584216 CDC37L1Q7L3B6 337 aa17.6■□□□□ 0.41
COPS3-218ENST00000584216 SP8Q8IXZ3 490 aa17.6■□□□□ 0.41
COPS3-218ENST00000584216 MPNDQ8N594 471 aa17.6■□□□□ 0.41
COPS3-218ENST00000584216 PGAP2Q9UHJ9 254 aa17.6■□□□□ 0.41
COPS3-218ENST00000584216 MAPK8IP3Q9UPT6 1336 aa17.6■□□□□ 0.41
COPS3-218ENST00000584216 NUP98P52948 1817 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms