RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 NTSR2O95665 410 aa11.39□□□□□ -0.59
CDK5RAP3-229ENST00000583697 DDX10Q13206 875 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP3-229ENST00000583697 NEUROD2Q15784 382 aa11.39□□□□□ -0.59
CDK5RAP3-229ENST00000583697 HSP90AB3PQ58FF7 597 aa11.39□□□□□ -0.59
CDK5RAP3-229ENST00000583697 SUSD4Q5VX71 490 aa11.39□□□□□ -0.59
CDK5RAP3-229ENST00000583697 OLFM4Q6UX06 510 aa11.39□□□□□ -0.59
CDK5RAP3-229ENST00000583697 LDHDQ86WU2 507 aa11.39□□□□□ -0.59
CDK5RAP3-229ENST00000583697 JDP2Q8WYK2 163 aa11.39□□□□□ -0.59
CDK5RAP3-229ENST00000583697 L3MBTL3Q96JM7 780 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-229ENST00000583697 PSMD1Q99460 953 aa11.39□□□□□ -0.59
CDK5RAP3-229ENST00000583697 POTEIP0CG38 1075 aa11.38□□□□□ -0.59
CDK5RAP3-229ENST00000583697 POTEJP0CG39 1038 aa11.38□□□□□ -0.59
CDK5RAP3-229ENST00000583697 GRIPAP1Q4V328 841 aa11.38□□□□□ -0.59
CDK5RAP3-229ENST00000583697 EAPPQ56P03 285 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP3-229ENST00000583697 ZNF34Q8IZ26 560 aa11.38□□□□□ -0.59
CDK5RAP3-229ENST00000583697 SYNE4Q8N205 404 aa11.38□□□□□ -0.59
CDK5RAP3-229ENST00000583697 RBM17Q96I25 401 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-229ENST00000583697 HACL1Q9UJ83 578 aa11.38□□□□□ -0.59
CDK5RAP3-229ENST00000583697 DDX60Q8IY21 1712 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-229ENST00000583697 ANXA1P04083 346 aa11.37□□□□□ -0.59
CDK5RAP3-229ENST00000583697 EIF6P56537 245 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-229ENST00000583697 NECTIN2Q92692 538 aa11.37□□□□□ -0.59
CDK5RAP3-229ENST00000583697 RUNDC1Q96C34 613 aa11.37□□□□□ -0.59
CDK5RAP3-229ENST00000583697 NLRP3Q96P20 1036 aa11.37□□□□□ -0.59
CDK5RAP3-229ENST00000583697 UTP14AQ9BVJ6 771 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-229ENST00000583697 TAF1DQ9H5J8 278 aaPredicted RBP11.37□□□□□ -0.59
CDK5RAP3-229ENST00000583697 CREBZFQ9NS37 354 aa11.37□□□□□ -0.59
CDK5RAP3-229ENST00000583697 LAS1LQ9Y4W2 734 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-229ENST00000583697 LRRC37AA6NMS7 1700 aa11.37□□□□□ -0.59
CDK5RAP3-229ENST00000583697 COL4A5P29400 1685 aa11.36□□□□□ -0.59
CDK5RAP3-229ENST00000583697 FZD9O00144 591 aa11.36□□□□□ -0.59
CDK5RAP3-229ENST00000583697 TCERG1O14776 1098 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-229ENST00000583697 LMOD1P29536 600 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-229ENST00000583697 HOXA10P31260 410 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-229ENST00000583697 EPHX2P34913 555 aa11.36□□□□□ -0.59
CDK5RAP3-229ENST00000583697 AIMP1Q12904 312 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-229ENST00000583697 PROSER3Q2NL68 480 aa11.36□□□□□ -0.59
CDK5RAP3-229ENST00000583697 LRP10Q7Z4F1 713 aa11.36□□□□□ -0.59
CDK5RAP3-229ENST00000583697 PNMA8AQ86V59 439 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-229ENST00000583697 GPC2Q8N158 579 aa11.36□□□□□ -0.59
CDK5RAP3-229ENST00000583697 CRAMP1Q96RY5 1269 aa11.36□□□□□ -0.59
CDK5RAP3-229ENST00000583697 CLEC11AQ9Y240 323 aa11.36□□□□□ -0.59
CDK5RAP3-229ENST00000583697 LTBP1Q14766 1721 aa11.35□□□□□ -0.59
CDK5RAP3-229ENST00000583697 HSPA1AP0DMV8 641 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-229ENST00000583697 HSPA1BP0DMV9 641 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-229ENST00000583697 PDIA6Q15084 440 aa11.35□□□□□ -0.59
CDK5RAP3-229ENST00000583697 HDGFL1Q5TGJ6 251 aa11.35□□□□□ -0.59
CDK5RAP3-229ENST00000583697 COPS6Q7L5N1 327 aa11.35□□□□□ -0.59
CDK5RAP3-229ENST00000583697 LARGE2Q8N3Y3 721 aa11.35□□□□□ -0.59
CDK5RAP3-229ENST00000583697 XAGE3Q8WTP9 111 aa11.35□□□□□ -0.59
CDK5RAP3-229ENST00000583697 MKRN1Q9UHC7 482 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-229ENST00000583697 GJA3Q9Y6H8 435 aa11.35□□□□□ -0.59
CDK5RAP3-229ENST00000583697 ABCC4O15439 1325 aa11.35□□□□□ -0.59
CDK5RAP3-229ENST00000583697 ZNF316A6NFI3 1004 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-229ENST00000583697 PPIP5K2O43314 1243 aa11.34□□□□□ -0.59
CDK5RAP3-229ENST00000583697 NIM1KQ8IY84 436 aa11.34□□□□□ -0.59
CDK5RAP3-229ENST00000583697 DDX21Q9NR30 783 aaKnown RBP eCLIP11.34□□□□□ -0.59
CDK5RAP3-229ENST00000583697 CHPF2Q9P2E5 772 aa11.34□□□□□ -0.59
CDK5RAP3-229ENST00000583697 SH3TC1Q8TE82 1336 aa11.34□□□□□ -0.59
CDK5RAP3-229ENST00000583697 CNTNAP1P78357 1384 aa11.33□□□□□ -0.6
CDK5RAP3-229ENST00000583697 HOXB7P09629 217 aa11.33□□□□□ -0.6
CDK5RAP3-229ENST00000583697 KRT24Q2M2I5 525 aa11.33□□□□□ -0.6
CDK5RAP3-229ENST00000583697 C3orf67Q6ZVT6 689 aa11.33□□□□□ -0.6
CDK5RAP3-229ENST00000583697 NLRP10Q86W26 655 aa11.33□□□□□ -0.6
CDK5RAP3-229ENST00000583697 SUPT20HQ8NEM7 779 aa11.33□□□□□ -0.6
CDK5RAP3-229ENST00000583697 TRMT112Q9UI30 125 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-229ENST00000583697 PASKQ96RG2 1323 aa11.33□□□□□ -0.6
CDK5RAP3-229ENST00000583697 TMEM88BA6NKF7 163 aa11.32□□□□□ -0.6
CDK5RAP3-229ENST00000583697 CHL1O00533 1208 aa11.32□□□□□ -0.6
CDK5RAP3-229ENST00000583697 TCIRG1Q13488 830 aa11.32□□□□□ -0.6
CDK5RAP3-229ENST00000583697 AOC3Q16853 763 aa11.32□□□□□ -0.6
CDK5RAP3-229ENST00000583697 DDX46Q7L014 1031 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-229ENST00000583697 DBF4Q9UBU7 674 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-229ENST00000583697 TRIM35Q9UPQ4 493 aa11.32□□□□□ -0.6
CDK5RAP3-229ENST00000583697 ATP6V0A2Q9Y487 856 aa11.32□□□□□ -0.6
CDK5RAP3-229ENST00000583697 DUOX1Q9NRD9 1551 aa11.32□□□□□ -0.6
CDK5RAP3-229ENST00000583697 CALD1Q05682 793 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-229ENST00000583697 SLC10A5Q5PT55 438 aa11.31□□□□□ -0.6
CDK5RAP3-229ENST00000583697 COL13A1Q5TAT6 717 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-229ENST00000583697 DPP8Q6V1X1 898 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-229ENST00000583697 SLC51AQ86UW1 340 aa11.31□□□□□ -0.6
CDK5RAP3-229ENST00000583697 TNS4Q8IZW8 715 aa11.31□□□□□ -0.6
CDK5RAP3-229ENST00000583697 CFAP44Q96MT7 982 aa11.31□□□□□ -0.6
CDK5RAP3-229ENST00000583697 PRKRIP1Q9H875 184 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-229ENST00000583697 ADAMTS8Q9UP79 889 aa11.31□□□□□ -0.6
CDK5RAP3-229ENST00000583697 TAF1P21675 1872 aa11.31□□□□□ -0.6
CDK5RAP3-229ENST00000583697 THSD7BQ9C0I4 1608 aa11.31□□□□□ -0.6
CDK5RAP3-229ENST00000583697 TRPM7Q96QT4 1865 aa11.3□□□□□ -0.6
CDK5RAP3-229ENST00000583697 PCNTO95613 3336 aa11.3□□□□□ -0.6
CDK5RAP3-229ENST00000583697 HCLS1P14317 486 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-229ENST00000583697 SCNN1DP51172 638 aa11.3□□□□□ -0.6
CDK5RAP3-229ENST00000583697 GRAPQ13588 217 aa11.3□□□□□ -0.6
CDK5RAP3-229ENST00000583697 MAP1SQ66K74 1059 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-229ENST00000583697 CNTROBQ8N137 903 aa11.3□□□□□ -0.6
CDK5RAP3-229ENST00000583697 PLBD2Q8NHP8 589 aa11.3□□□□□ -0.6
CDK5RAP3-229ENST00000583697 GRAPLQ8TC17 118 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-229ENST00000583697 VPS33BQ9H267 617 aa11.3□□□□□ -0.6
CDK5RAP3-229ENST00000583697 BBOX1O75936 387 aa11.29□□□□□ -0.6
CDK5RAP3-229ENST00000583697 GOLGA2Q08379 1002 aa11.29□□□□□ -0.6
CDK5RAP3-229ENST00000583697 ANKRD13DQ6ZTN6 518 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms