RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 GRM8O00222 908 aa17.23■□□□□ 0.35
ITGB4-209ENST00000583327 SUSD4Q5VX71 490 aa17.23■□□□□ 0.35
ITGB4-209ENST00000583327 NLGN1Q8N2Q7 840 aa17.23■□□□□ 0.35
ITGB4-209ENST00000583327 SLC16A10Q8TF71 515 aa17.23■□□□□ 0.35
ITGB4-209ENST00000583327 CHMP4BQ9H444 224 aaKnown RBP17.23■□□□□ 0.35
ITGB4-209ENST00000583327 PCCAP05165 728 aaPredicted RBP17.22■□□□□ 0.35
ITGB4-209ENST00000583327 GNAI3P08754 354 aa17.22■□□□□ 0.35
ITGB4-209ENST00000583327 NBPF7P0C2Y1 421 aaPredicted RBP17.22■□□□□ 0.35
ITGB4-209ENST00000583327 NFIXQ14938 502 aa17.22■□□□□ 0.35
ITGB4-209ENST00000583327 ZBTB38Q8NAP3 1195 aaPredicted RBP17.22■□□□□ 0.35
ITGB4-209ENST00000583327 PDGFDQ9GZP0 370 aaPredicted RBP17.22■□□□□ 0.35
ITGB4-209ENST00000583327 NIP7Q9Y221 180 aaKnown RBP eCLIP17.22■□□□□ 0.35
ITGB4-209ENST00000583327 NTSR2O95665 410 aa17.21■□□□□ 0.35
ITGB4-209ENST00000583327 GPTP24298 496 aa17.21■□□□□ 0.35
ITGB4-209ENST00000583327 KAZALD1Q96I82 304 aa17.21■□□□□ 0.35
ITGB4-209ENST00000583327 SETDB2Q96T68 719 aa17.21■□□□□ 0.35
ITGB4-209ENST00000583327 NEFLP07196 543 aa17.2■□□□□ 0.34
ITGB4-209ENST00000583327 CDHR2Q9BYE9 1310 aa17.2■□□□□ 0.34
ITGB4-209ENST00000583327 COL24A1Q17RW2 1714 aa17.19■□□□□ 0.34
ITGB4-209ENST00000583327 SLC10A5Q5PT55 438 aa17.19■□□□□ 0.34
ITGB4-209ENST00000583327 PPP1R42Q7Z4L9 355 aa17.19■□□□□ 0.34
ITGB4-209ENST00000583327 UTP14AQ9BVJ6 771 aaKnown RBP17.19■□□□□ 0.34
ITGB4-209ENST00000583327 C9orf78Q9NZ63 289 aaPredicted RBP17.19■□□□□ 0.34
ITGB4-209ENST00000583327 POLRMTO00411 1230 aaKnown RBP17.18■□□□□ 0.34
ITGB4-209ENST00000583327 DDR1Q08345 913 aa17.18■□□□□ 0.34
ITGB4-209ENST00000583327 PLA2G12BQ9BX93 195 aa17.18■□□□□ 0.34
ITGB4-209ENST00000583327 CASZ1Q86V15 1759 aa17.17■□□□□ 0.34
ITGB4-209ENST00000583327 AFDNP55196 1824 aaKnown RBP17.17■□□□□ 0.34
ITGB4-209ENST00000583327 MSH5O43196 834 aa17.17■□□□□ 0.34
ITGB4-209ENST00000583327 GNAI2P04899 355 aa17.17■□□□□ 0.34
ITGB4-209ENST00000583327 UBTFL1P0CB47 393 aaPredicted RBP17.17■□□□□ 0.34
ITGB4-209ENST00000583327 SYNE4Q8N205 404 aa17.17■□□□□ 0.34
ITGB4-209ENST00000583327 FAM89AQ96GI7 184 aa17.17■□□□□ 0.34
ITGB4-209ENST00000583327 TRMT112Q9UI30 125 aaKnown RBP17.17■□□□□ 0.34
ITGB4-209ENST00000583327 HDAC5Q9UQL6 1122 aa17.17■□□□□ 0.34
ITGB4-209ENST00000583327 PCDHB15Q9Y5E8 787 aa17.17■□□□□ 0.34
ITGB4-209ENST00000583327 CARMIL3Q8ND23 1372 aa17.16■□□□□ 0.34
ITGB4-209ENST00000583327 FOXO4P98177 505 aa17.16■□□□□ 0.34
ITGB4-209ENST00000583327 R3HDM1Q15032 1099 aaKnown RBP17.16■□□□□ 0.34
ITGB4-209ENST00000583327 TPTE2Q6XPS3 522 aa17.16■□□□□ 0.34
ITGB4-209ENST00000583327 BICDL1Q6ZP65 573 aa17.16■□□□□ 0.34
ITGB4-209ENST00000583327 UBE3BQ7Z3V4 1068 aa17.16■□□□□ 0.34
ITGB4-209ENST00000583327 JARID2Q92833 1246 aaPredicted RBP17.16■□□□□ 0.34
ITGB4-209ENST00000583327 SUCLG2Q96I99 432 aa17.16■□□□□ 0.34
ITGB4-209ENST00000583327 NYXQ9GZU5 481 aa17.16■□□□□ 0.34
ITGB4-209ENST00000583327 SH3TC1Q8TE82 1336 aa17.16■□□□□ 0.34
ITGB4-209ENST00000583327 SERPINB2P05120 415 aa17.15■□□□□ 0.34
ITGB4-209ENST00000583327 MTX1Q13505 466 aa17.15■□□□□ 0.34
ITGB4-209ENST00000583327 RABL6Q3YEC7 729 aaPredicted RBP17.15■□□□□ 0.34
ITGB4-209ENST00000583327 EPHA10Q5JZY3 1008 aa17.15■□□□□ 0.34
ITGB4-209ENST00000583327 NRXN2Q9P2S2 1712 aa17.14■□□□□ 0.33
ITGB4-209ENST00000583327 SOCS7O14512 581 aa17.14■□□□□ 0.33
ITGB4-209ENST00000583327 CSF1RP07333 972 aa17.14■□□□□ 0.33
ITGB4-209ENST00000583327 SIRT2Q8IXJ6 389 aa17.14■□□□□ 0.33
ITGB4-209ENST00000583327 RPAP2Q8IXW5 612 aaPredicted RBP17.14■□□□□ 0.33
ITGB4-209ENST00000583327 ANKRD44Q8N8A2 993 aa17.14■□□□□ 0.33
ITGB4-209ENST00000583327 LRRFIP2Q9Y608 721 aaKnown RBP17.14■□□□□ 0.33
ITGB4-209ENST00000583327 RIC1Q4ADV7 1423 aa17.13■□□□□ 0.33
ITGB4-209ENST00000583327 IRS4O14654 1257 aaPredicted RBP17.13■□□□□ 0.33
ITGB4-209ENST00000583327 MMP10P09238 476 aa17.13■□□□□ 0.33
ITGB4-209ENST00000583327 ATP8B2P98198 1209 aa17.13■□□□□ 0.33
ITGB4-209ENST00000583327 ERFEQ4G0M1 354 aa17.13■□□□□ 0.33
ITGB4-209ENST00000583327 CEP85Q6P2H3 762 aa17.13■□□□□ 0.33
ITGB4-209ENST00000583327 NBPF5PQ86XG9 351 aaPredicted RBP17.13■□□□□ 0.33
ITGB4-209ENST00000583327 PDE8AO60658 829 aa17.12■□□□□ 0.33
ITGB4-209ENST00000583327 PRR5LQ6MZQ0 368 aa17.12■□□□□ 0.33
ITGB4-209ENST00000583327 NUTM1Q86Y26 1132 aa17.12■□□□□ 0.33
ITGB4-209ENST00000583327 MTFR1LQ9H019 292 aa17.12■□□□□ 0.33
ITGB4-209ENST00000583327 BICC1Q9H694 974 aaKnown RBP17.12■□□□□ 0.33
ITGB4-209ENST00000583327 C1orf115Q9H7X2 142 aa17.12■□□□□ 0.33
ITGB4-209ENST00000583327 KLRG2A4D1S0 409 aaPredicted RBP17.11■□□□□ 0.33
ITGB4-209ENST00000583327 FAM177BA6PVY3 158 aa17.11■□□□□ 0.33
ITGB4-209ENST00000583327 SF3B3Q15393 1217 aaKnown RBP17.11■□□□□ 0.33
ITGB4-209ENST00000583327 RTL5Q5HYW3 569 aaPredicted RBP17.11■□□□□ 0.33
ITGB4-209ENST00000583327 MSL1Q68DK7 614 aa17.11■□□□□ 0.33
ITGB4-209ENST00000583327 TTLL11Q8NHH1 800 aa17.11■□□□□ 0.33
ITGB4-209ENST00000583327 SGIP1Q9BQI5 828 aa17.11■□□□□ 0.33
ITGB4-209ENST00000583327 HSP90B1P14625 803 aaKnown RBP17.1■□□□□ 0.33
ITGB4-209ENST00000583327 HDAC1Q13547 482 aaPredicted RBP17.1■□□□□ 0.33
ITGB4-209ENST00000583327 POLA2Q14181 598 aa17.1■□□□□ 0.33
ITGB4-209ENST00000583327 SSH3Q8TE77 659 aa17.1■□□□□ 0.33
ITGB4-209ENST00000583327 PPP4R2Q9NY27 417 aa17.1■□□□□ 0.33
ITGB4-209ENST00000583327 GTF3C3Q9Y5Q9 886 aa17.1■□□□□ 0.33
ITGB4-209ENST00000583327 PARP3Q9Y6F1 533 aa17.1■□□□□ 0.33
ITGB4-209ENST00000583327 ABCC12Q96J65 1359 aa17.1■□□□□ 0.33
ITGB4-209ENST00000583327 PSDA5PKW4 1024 aaPredicted RBP17.09■□□□□ 0.33
ITGB4-209ENST00000583327 HCLS1P14317 486 aaPredicted RBP17.09■□□□□ 0.33
ITGB4-209ENST00000583327 CNBD1Q8NA66 436 aa17.09■□□□□ 0.33
ITGB4-209ENST00000583327 DDX60Q8IY21 1712 aaKnown RBP17.09■□□□□ 0.33
ITGB4-209ENST00000583327 RTL9Q8NET4 1388 aa17.08■□□□□ 0.32
ITGB4-209ENST00000583327 PNMA6EA0A0J9YXQ4 647 aa17.08■□□□□ 0.32
ITGB4-209ENST00000583327 RFX5P48382 616 aaPredicted RBP17.08■□□□□ 0.32
ITGB4-209ENST00000583327 CTSWP56202 376 aa17.08■□□□□ 0.32
ITGB4-209ENST00000583327 LMBR1LQ6UX01 489 aa17.08■□□□□ 0.32
ITGB4-209ENST00000583327 LAMB2P55268 1798 aa17.07■□□□□ 0.32
ITGB4-209ENST00000583327 ZBTB7AO95365 584 aa17.07■□□□□ 0.32
ITGB4-209ENST00000583327 IGHDP01880 384 aa17.07■□□□□ 0.32
ITGB4-209ENST00000583327 C3orf67Q6ZVT6 689 aa17.07■□□□□ 0.32
ITGB4-209ENST00000583327 BRIP1Q9BX63 1249 aa17.07■□□□□ 0.32
ITGB4-209ENST00000583327 GTF2E1P29083 439 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms