RNA–Protein interactions for RNA: ENST00000583092.1

PPP4R1-224, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-224ENST00000583092 IBTKQ9P2D0 1353 aaPredicted RBP13.37□□□□□ -0.27
PPP4R1-224ENST00000583092 TCERG1O14776 1098 aaKnown RBP13.37□□□□□ -0.27
PPP4R1-224ENST00000583092 PPEF1O14829 653 aaPredicted RBP13.37□□□□□ -0.27
PPP4R1-224ENST00000583092 GPC2Q8N158 579 aa13.37□□□□□ -0.27
PPP4R1-224ENST00000583092 CHMP4AQ9BY43 222 aa13.37□□□□□ -0.27
PPP4R1-224ENST00000583092 ANKRD31Q8N7Z5 1873 aa13.37□□□□□ -0.27
PPP4R1-224ENST00000583092 RNF123Q5XPI4 1314 aa13.37□□□□□ -0.27
PPP4R1-224ENST00000583092 SLX4Q8IY92 1834 aa13.36□□□□□ -0.27
PPP4R1-224ENST00000583092 CCDC88AQ3V6T2 1871 aa13.36□□□□□ -0.27
PPP4R1-224ENST00000583092 FZD9O00144 591 aa13.36□□□□□ -0.27
PPP4R1-224ENST00000583092 BBOX1O75936 387 aa13.36□□□□□ -0.27
PPP4R1-224ENST00000583092 EPHX2P34913 555 aa13.36□□□□□ -0.27
PPP4R1-224ENST00000583092 COPS6Q7L5N1 327 aa13.36□□□□□ -0.27
PPP4R1-224ENST00000583092 NIM1KQ8IY84 436 aa13.36□□□□□ -0.27
PPP4R1-224ENST00000583092 CCDC146Q8IYE0 955 aa13.36□□□□□ -0.27
PPP4R1-224ENST00000583092 NECTIN2Q92692 538 aa13.36□□□□□ -0.27
PPP4R1-224ENST00000583092 VPS33BQ9H267 617 aa13.36□□□□□ -0.27
PPP4R1-224ENST00000583092 GJA3Q9Y6H8 435 aa13.36□□□□□ -0.27
PPP4R1-224ENST00000583092 CALD1Q05682 793 aaKnown RBP13.35□□□□□ -0.27
PPP4R1-224ENST00000583092 SLC10A5Q5PT55 438 aa13.35□□□□□ -0.27
PPP4R1-224ENST00000583092 OLFM4Q6UX06 510 aa13.35□□□□□ -0.27
PPP4R1-224ENST00000583092 DDX46Q7L014 1031 aaKnown RBP13.35□□□□□ -0.27
PPP4R1-224ENST00000583092 DDX21Q9NR30 783 aaKnown RBP eCLIP13.35□□□□□ -0.27
PPP4R1-224ENST00000583092 TRMT112Q9UI30 125 aaKnown RBP13.35□□□□□ -0.27
PPP4R1-224ENST00000583092 BCORQ6W2J9 1755 aa13.35□□□□□ -0.27
PPP4R1-224ENST00000583092 FER1L6Q2WGJ9 1857 aa13.34□□□□□ -0.27
PPP4R1-224ENST00000583092 WDR90Q96KV7 1748 aa13.34□□□□□ -0.27
PPP4R1-224ENST00000583092 TMEM88BA6NKF7 163 aa13.34□□□□□ -0.27
PPP4R1-224ENST00000583092 CHL1O00533 1208 aa13.34□□□□□ -0.27
PPP4R1-224ENST00000583092 PPIP5K2O43314 1243 aa13.34□□□□□ -0.27
PPP4R1-224ENST00000583092 NTSR2O95665 410 aa13.34□□□□□ -0.27
PPP4R1-224ENST00000583092 TCIRG1Q13488 830 aa13.34□□□□□ -0.27
PPP4R1-224ENST00000583092 XAGE3Q8WTP9 111 aa13.34□□□□□ -0.27
PPP4R1-224ENST00000583092 UBN2Q6ZU65 1347 aa13.34□□□□□ -0.27
PPP4R1-224ENST00000583092 HOXB7P09629 217 aa13.33□□□□□ -0.28
PPP4R1-224ENST00000583092 HSP90B1P14625 803 aaKnown RBP13.33□□□□□ -0.28
PPP4R1-224ENST00000583092 PDIA6Q15084 440 aa13.33□□□□□ -0.28
PPP4R1-224ENST00000583092 HDGFL1Q5TGJ6 251 aa13.33□□□□□ -0.28
PPP4R1-224ENST00000583092 DBF4Q9UBU7 674 aaPredicted RBP13.33□□□□□ -0.28
PPP4R1-224ENST00000583092 MKRN1Q9UHC7 482 aaKnown RBP13.33□□□□□ -0.28
PPP4R1-224ENST00000583092 ATP6V0A2Q9Y487 856 aa13.33□□□□□ -0.28
PPP4R1-224ENST00000583092 SH3TC1Q8TE82 1336 aa13.33□□□□□ -0.28
PPP4R1-224ENST00000583092 ZNF541Q9H0D2 1346 aa13.33□□□□□ -0.28
PPP4R1-224ENST00000583092 DICER1Q9UPY3 1922 aaKnown RBP13.33□□□□□ -0.28
PPP4R1-224ENST00000583092 ABCC12Q96J65 1359 aa13.32□□□□□ -0.28
PPP4R1-224ENST00000583092 ANXA1P04083 346 aa13.32□□□□□ -0.28
PPP4R1-224ENST00000583092 POTEIP0CG38 1075 aa13.32□□□□□ -0.28
PPP4R1-224ENST00000583092 POTEJP0CG39 1038 aa13.32□□□□□ -0.28
PPP4R1-224ENST00000583092 HSPA1AP0DMV8 641 aaKnown RBP13.32□□□□□ -0.28
PPP4R1-224ENST00000583092 HSPA1BP0DMV9 641 aaKnown RBP13.32□□□□□ -0.28
PPP4R1-224ENST00000583092 DPP8Q6V1X1 898 aaPredicted RBP13.32□□□□□ -0.28
PPP4R1-224ENST00000583092 ANKRD13DQ6ZTN6 518 aa13.32□□□□□ -0.28
PPP4R1-224ENST00000583092 TMC4Q7Z404 712 aa13.32□□□□□ -0.28
PPP4R1-224ENST00000583092 SP8Q8IXZ3 490 aa13.32□□□□□ -0.28
PPP4R1-224ENST00000583092 TNS4Q8IZW8 715 aa13.32□□□□□ -0.28
PPP4R1-224ENST00000583092 CNTROBQ8N137 903 aa13.32□□□□□ -0.28
PPP4R1-224ENST00000583092 MPNDQ8N594 471 aa13.32□□□□□ -0.28
PPP4R1-224ENST00000583092 AIDAQ96BJ3 306 aa13.32□□□□□ -0.28
PPP4R1-224ENST00000583092 HYPKQ9NX55 129 aa13.32□□□□□ -0.28
PPP4R1-224ENST00000583092 ADAMTS8Q9UP79 889 aa13.32□□□□□ -0.28
PPP4R1-224ENST00000583092 TIAM2Q8IVF5 1701 aa13.32□□□□□ -0.28
PPP4R1-224ENST00000583092 RIC1Q4ADV7 1423 aa13.31□□□□□ -0.28
PPP4R1-224ENST00000583092 COL11A2P13942 1736 aaPredicted RBP13.31□□□□□ -0.28
PPP4R1-224ENST00000583092 NLRP10Q86W26 655 aa13.31□□□□□ -0.28
PPP4R1-224ENST00000583092 PLBD2Q8NHP8 589 aa13.31□□□□□ -0.28
PPP4R1-224ENST00000583092 CFAP44Q96MT7 982 aa13.31□□□□□ -0.28
PPP4R1-224ENST00000583092 HCLS1P14317 486 aaPredicted RBP13.3□□□□□ -0.28
PPP4R1-224ENST00000583092 TNIP1Q15025 636 aa13.3□□□□□ -0.28
PPP4R1-224ENST00000583092 PROSER3Q2NL68 480 aa13.3□□□□□ -0.28
PPP4R1-224ENST00000583092 ZNRF3Q9ULT6 936 aa13.3□□□□□ -0.28
PPP4R1-224ENST00000583092 DLG5Q8TDM6 1919 aa13.3□□□□□ -0.28
PPP4R1-224ENST00000583092 GNAI1P63096 354 aa13.29□□□□□ -0.28
PPP4R1-224ENST00000583092 GOLGA2Q08379 1002 aa13.29□□□□□ -0.28
PPP4R1-224ENST00000583092 GRAPQ13588 217 aa13.29□□□□□ -0.28
PPP4R1-224ENST00000583092 DEFB115Q30KQ5 88 aa13.29□□□□□ -0.28
PPP4R1-224ENST00000583092 COL13A1Q5TAT6 717 aaPredicted RBP13.29□□□□□ -0.28
PPP4R1-224ENST00000583092 DUSP27Q5VZP5 1158 aa13.29□□□□□ -0.28
PPP4R1-224ENST00000583092 MAP1SQ66K74 1059 aaPredicted RBP13.29□□□□□ -0.28
PPP4R1-224ENST00000583092 USP50Q70EL3 339 aaPredicted RBP13.29□□□□□ -0.28
PPP4R1-224ENST00000583092 LRP10Q7Z4F1 713 aa13.29□□□□□ -0.28
PPP4R1-224ENST00000583092 RIC3Q7Z5B4 369 aa13.29□□□□□ -0.28
PPP4R1-224ENST00000583092 GRAPLQ8TC17 118 aaPredicted RBP13.29□□□□□ -0.28
PPP4R1-224ENST00000583092 BCL2L13Q9BXK5 485 aa13.29□□□□□ -0.28
PPP4R1-224ENST00000583092 CHPF2Q9P2E5 772 aa13.29□□□□□ -0.28
PPP4R1-224ENST00000583092 ABT1Q9ULW3 272 aaKnown RBP13.29□□□□□ -0.28
PPP4R1-224ENST00000583092 PASKQ96RG2 1323 aa13.29□□□□□ -0.28
PPP4R1-224ENST00000583092 LAMB4A4D0S4 1761 aa13.29□□□□□ -0.28
PPP4R1-224ENST00000583092 KDM3BQ7LBC6 1761 aa13.28□□□□□ -0.28
PPP4R1-224ENST00000583092 NUP98P52948 1817 aa13.28□□□□□ -0.28
PPP4R1-224ENST00000583092 CACNA1SQ13698 1873 aa13.28□□□□□ -0.28
PPP4R1-224ENST00000583092 ITGBL1O95965 494 aaPredicted RBP13.28□□□□□ -0.28
PPP4R1-224ENST00000583092 AOC3Q16853 763 aa13.28□□□□□ -0.28
PPP4R1-224ENST00000583092 TRIM35Q9UPQ4 493 aa13.28□□□□□ -0.28
PPP4R1-224ENST00000583092 ABCC4O15439 1325 aa13.28□□□□□ -0.28
PPP4R1-224ENST00000583092 ARFGEF2Q9Y6D5 1785 aa13.27□□□□□ -0.28
PPP4R1-224ENST00000583092 SCN4AP35499 1836 aa13.27□□□□□ -0.28
PPP4R1-224ENST00000583092 EPS15P42566 896 aa13.27□□□□□ -0.29
PPP4R1-224ENST00000583092 CIAPIN1Q6FI81 312 aa13.27□□□□□ -0.29
PPP4R1-224ENST00000583092 C3orf67Q6ZVT6 689 aa13.27□□□□□ -0.29
PPP4R1-224ENST00000583092 PAXIP1Q6ZW49 1069 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms