RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 TPTE2Q6XPS3 522 aa15.37■□□□□ 0.05
SNRPD1-204ENST00000582475 NBPF5PQ86XG9 351 aaPredicted RBP15.37■□□□□ 0.05
SNRPD1-204ENST00000582475 SYT17Q9BSW7 474 aa15.37■□□□□ 0.05
SNRPD1-204ENST00000582475 METTL22Q9BUU2 404 aaPredicted RBP15.37■□□□□ 0.05
SNRPD1-204ENST00000582475 BCL2L13Q9BXK5 485 aa15.37■□□□□ 0.05
SNRPD1-204ENST00000582475 CD2APQ9Y5K6 639 aa15.37■□□□□ 0.05
SNRPD1-204ENST00000582475 CARMIL3Q8ND23 1372 aa15.36■□□□□ 0.05
SNRPD1-204ENST00000582475 ATP5J2-PTCD1G3V325 749 aa15.36■□□□□ 0.05
SNRPD1-204ENST00000582475 NPHP1O15259 732 aa15.36■□□□□ 0.05
SNRPD1-204ENST00000582475 PARP10Q53GL7 1025 aa15.36■□□□□ 0.05
SNRPD1-204ENST00000582475 MYD88Q99836 296 aa15.36■□□□□ 0.05
SNRPD1-204ENST00000582475 ISCA1Q9BUE6 129 aa15.36■□□□□ 0.05
SNRPD1-204ENST00000582475 SMC4Q9NTJ3 1288 aa15.36■□□□□ 0.05
SNRPD1-204ENST00000582475 GTF2E1P29083 439 aaPredicted RBP15.35■□□□□ 0.05
SNRPD1-204ENST00000582475 TRIM28Q13263 835 aaKnown RBP15.35■□□□□ 0.05
SNRPD1-204ENST00000582475 PRR5LQ6MZQ0 368 aa15.35■□□□□ 0.05
SNRPD1-204ENST00000582475 PPP1R42Q7Z4L9 355 aa15.35■□□□□ 0.05
SNRPD1-204ENST00000582475 NLRP10Q86W26 655 aa15.35■□□□□ 0.05
SNRPD1-204ENST00000582475 CCDC24Q8N4L8 307 aa15.35■□□□□ 0.05
SNRPD1-204ENST00000582475 NYXQ9GZU5 481 aa15.35■□□□□ 0.05
SNRPD1-204ENST00000582475 UBN2Q6ZU65 1347 aa15.35■□□□□ 0.05
SNRPD1-204ENST00000582475 CACNA1FO60840 1977 aa15.35■□□□□ 0.05
SNRPD1-204ENST00000582475 ATP10DQ9P241 1426 aa15.34■□□□□ 0.05
SNRPD1-204ENST00000582475 NUP98P52948 1817 aa15.34■□□□□ 0.05
SNRPD1-204ENST00000582475 BRPF1P55201 1214 aaPredicted RBP15.34■□□□□ 0.05
SNRPD1-204ENST00000582475 CNBD1Q8NA66 436 aa15.34■□□□□ 0.05
SNRPD1-204ENST00000582475 DNAAF4Q8WXU2 420 aa15.34■□□□□ 0.05
SNRPD1-204ENST00000582475 UTP14AQ9BVJ6 771 aaKnown RBP15.34■□□□□ 0.05
SNRPD1-204ENST00000582475 LRP5O75197 1615 aa15.34■□□□□ 0.05
SNRPD1-204ENST00000582475 SRCAPQ6ZRS2 3230 aa15.33■□□□□ 0.04
SNRPD1-204ENST00000582475 SCN7AQ01118 1682 aa15.33■□□□□ 0.04
SNRPD1-204ENST00000582475 F6X3S4 739 aa15.33■□□□□ 0.04
SNRPD1-204ENST00000582475 TGFB2P61812 414 aa15.33■□□□□ 0.04
SNRPD1-204ENST00000582475 ST5P78524 1137 aa15.33■□□□□ 0.04
SNRPD1-204ENST00000582475 NEXNQ0ZGT2 675 aa15.33■□□□□ 0.04
SNRPD1-204ENST00000582475 NOB1Q9ULX3 412 aaKnown RBP15.33■□□□□ 0.04
SNRPD1-204ENST00000582475 BCORQ6W2J9 1755 aa15.33■□□□□ 0.04
SNRPD1-204ENST00000582475 ADCY9O60503 1353 aa15.33■□□□□ 0.04
SNRPD1-204ENST00000582475 BCAR3O75815 825 aa15.32■□□□□ 0.04
SNRPD1-204ENST00000582475 NUTM1Q86Y26 1132 aa15.32■□□□□ 0.04
SNRPD1-204ENST00000582475 BRIP1Q9BX63 1249 aa15.32■□□□□ 0.04
SNRPD1-204ENST00000582475 TRMT112Q9UI30 125 aaKnown RBP15.32■□□□□ 0.04
SNRPD1-204ENST00000582475 PTPRCP08575 1304 aa15.32■□□□□ 0.04
SNRPD1-204ENST00000582475 NTSR2O95665 410 aa15.31■□□□□ 0.04
SNRPD1-204ENST00000582475 IGKV5-2P06315 115 aa15.31■□□□□ 0.04
SNRPD1-204ENST00000582475 ERFEQ4G0M1 354 aa15.31■□□□□ 0.04
SNRPD1-204ENST00000582475 ZNF579Q8NAF0 562 aaKnown RBP15.31■□□□□ 0.04
SNRPD1-204ENST00000582475 CCDC191Q8NCU4 936 aa15.31■□□□□ 0.04
SNRPD1-204ENST00000582475 NLGN2Q8NFZ4 835 aa15.31■□□□□ 0.04
SNRPD1-204ENST00000582475 A0A0G2JLW4 131 aa15.3■□□□□ 0.04
SNRPD1-204ENST00000582475 PDE6BP35913 854 aa15.3■□□□□ 0.04
SNRPD1-204ENST00000582475 SLC10A5Q5PT55 438 aa15.3■□□□□ 0.04
SNRPD1-204ENST00000582475 SLC4A10Q6U841 1118 aa15.3■□□□□ 0.04
SNRPD1-204ENST00000582475 CWC25Q9NXE8 425 aaPredicted RBP15.3■□□□□ 0.04
SNRPD1-204ENST00000582475 NEURL1BA8MQ27 555 aa15.29■□□□□ 0.04
SNRPD1-204ENST00000582475 DPEP1P16444 411 aa15.29■□□□□ 0.04
SNRPD1-204ENST00000582475 CWF19L2Q2TBE0 894 aaKnown RBP15.29■□□□□ 0.04
SNRPD1-204ENST00000582475 BEND3Q5T5X7 828 aa15.29■□□□□ 0.04
SNRPD1-204ENST00000582475 SYNE4Q8N205 404 aa15.29■□□□□ 0.04
SNRPD1-204ENST00000582475 LINS1Q8NG48 757 aa15.29■□□□□ 0.04
SNRPD1-204ENST00000582475 FAM89AQ96GI7 184 aa15.29■□□□□ 0.04
SNRPD1-204ENST00000582475 PDZRN3Q9UPQ7 1066 aa15.29■□□□□ 0.04
SNRPD1-204ENST00000582475 AFDNP55196 1824 aaKnown RBP15.29■□□□□ 0.04
SNRPD1-204ENST00000582475 C10orf71Q711Q0 1435 aa15.28■□□□□ 0.04
SNRPD1-204ENST00000582475 IBTKQ9P2D0 1353 aaPredicted RBP15.28■□□□□ 0.04
SNRPD1-204ENST00000582475 SH3TC1Q8TE82 1336 aa15.28■□□□□ 0.04
SNRPD1-204ENST00000582475 H0YIN7 160 aa15.28■□□□□ 0.04
SNRPD1-204ENST00000582475 IPO8O15397 1037 aaKnown RBP15.28■□□□□ 0.04
SNRPD1-204ENST00000582475 CHRNA5P30532 468 aa15.28■□□□□ 0.04
SNRPD1-204ENST00000582475 C2CD5Q86YS7 1000 aa15.28■□□□□ 0.04
SNRPD1-204ENST00000582475 ZBTB38Q8NAP3 1195 aaPredicted RBP15.28■□□□□ 0.04
SNRPD1-204ENST00000582475 ARHGAP45Q92619 1136 aa15.28■□□□□ 0.04
SNRPD1-204ENST00000582475 API5Q9BZZ5 524 aaKnown RBP15.28■□□□□ 0.04
SNRPD1-204ENST00000582475 RNF123Q5XPI4 1314 aa15.27■□□□□ 0.04
SNRPD1-204ENST00000582475 PCCAP05165 728 aaPredicted RBP15.27■□□□□ 0.04
SNRPD1-204ENST00000582475 KCNA3P22001 575 aa15.27■□□□□ 0.04
SNRPD1-204ENST00000582475 RTL5Q5HYW3 569 aaPredicted RBP15.27■□□□□ 0.04
SNRPD1-204ENST00000582475 JARID2Q92833 1246 aaPredicted RBP15.27■□□□□ 0.04
SNRPD1-204ENST00000582475 FRAT1Q92837 279 aaPredicted RBP15.27■□□□□ 0.04
SNRPD1-204ENST00000582475 NLRP3Q96P20 1036 aa15.27■□□□□ 0.04
SNRPD1-204ENST00000582475 NRXN2Q9P2S2 1712 aa15.26■□□□□ 0.03
SNRPD1-204ENST00000582475 KIF16BQ96L93 1317 aa15.26■□□□□ 0.03
SNRPD1-204ENST00000582475 KLRG2A4D1S0 409 aaPredicted RBP15.26■□□□□ 0.03
SNRPD1-204ENST00000582475 H7C1W4 665 aa15.26■□□□□ 0.03
SNRPD1-204ENST00000582475 ALDH1L1O75891 902 aa15.26■□□□□ 0.03
SNRPD1-204ENST00000582475 HCLS1P14317 486 aaPredicted RBP15.26■□□□□ 0.03
SNRPD1-204ENST00000582475 GCKRQ14397 625 aa15.26■□□□□ 0.03
SNRPD1-204ENST00000582475 SRCIN1Q9C0H9 1055 aa15.26■□□□□ 0.03
SNRPD1-204ENST00000582475 RCAN3Q9UKA8 241 aa15.26■□□□□ 0.03
SNRPD1-204ENST00000582475 IRS4O14654 1257 aaPredicted RBP15.25■□□□□ 0.03
SNRPD1-204ENST00000582475 ZNF622Q969S3 477 aaKnown RBP eCLIP15.25■□□□□ 0.033e-16■□□□□ 10.2
SNRPD1-204ENST00000582475 PIM2Q9P1W9 311 aa15.25■□□□□ 0.03
SNRPD1-204ENST00000582475 ARFGEF2Q9Y6D5 1785 aa15.25■□□□□ 0.03
SNRPD1-204ENST00000582475 ABCC12Q96J65 1359 aa15.24■□□□□ 0.03
SNRPD1-204ENST00000582475 SRGNP10124 158 aa15.24■□□□□ 0.03
SNRPD1-204ENST00000582475 HSP90B1P14625 803 aaKnown RBP15.24■□□□□ 0.03
SNRPD1-204ENST00000582475 CLCN6P51797 869 aa15.24■□□□□ 0.03
SNRPD1-204ENST00000582475 ZKSCAN2Q63HK3 967 aa15.24■□□□□ 0.03
SNRPD1-204ENST00000582475 ATF7IPQ6VMQ6 1270 aa15.24■□□□□ 0.03
SNRPD1-204ENST00000582475 MASTLQ96GX5 879 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms