RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 LRRC4BQ9NT99 713 aa15.69■□□□□ 0.1
CDK5RAP3-217ENST00000580287 SURF6O75683 361 aaKnown RBP15.68■□□□□ 0.1
CDK5RAP3-217ENST00000580287 FAM89AQ96GI7 184 aa15.68■□□□□ 0.1
CDK5RAP3-217ENST00000580287 CWC25Q9NXE8 425 aaPredicted RBP15.68■□□□□ 0.1
CDK5RAP3-217ENST00000580287 UTYO14607 1347 aa15.68■□□□□ 0.1
CDK5RAP3-217ENST00000580287 GIGYF2Q6Y7W6 1299 aaKnown RBP15.68■□□□□ 0.1
CDK5RAP3-217ENST00000580287 FAM196AQ6ZSG2 479 aa15.68■□□□□ 0.1
CDK5RAP3-217ENST00000580287 SSH3Q8TE77 659 aa15.68■□□□□ 0.1
CDK5RAP3-217ENST00000580287 BCL11BQ9C0K0 894 aaPredicted RBP15.68■□□□□ 0.1
CDK5RAP3-217ENST00000580287 TJP1Q07157 1748 aa15.68■□□□□ 0.1
CDK5RAP3-217ENST00000580287 CASP7P55210 303 aa15.67■□□□□ 0.1
CDK5RAP3-217ENST00000580287 CCDC85AQ96PX6 553 aaPredicted RBP15.67■□□□□ 0.1
CDK5RAP3-217ENST00000580287 ISCA1Q9BUE6 129 aa15.67■□□□□ 0.1
CDK5RAP3-217ENST00000580287 IL1RAPL2Q9NP60 686 aa15.67■□□□□ 0.1
CDK5RAP3-217ENST00000580287 POLA2Q14181 598 aa15.66■□□□□ 0.1
CDK5RAP3-217ENST00000580287 MFAP1P55081 439 aaKnown RBP15.66■□□□□ 0.1
CDK5RAP3-217ENST00000580287 TSHZ3Q63HK5 1081 aa15.66■□□□□ 0.1
CDK5RAP3-217ENST00000580287 SIL1Q9H173 461 aa15.66■□□□□ 0.1
CDK5RAP3-217ENST00000580287 MYH14Q7Z406 1995 aaKnown RBP15.66■□□□□ 0.1
CDK5RAP3-217ENST00000580287 H7C1W4 665 aa15.65■□□□□ 0.1
CDK5RAP3-217ENST00000580287 GNPATO15228 680 aa15.65■□□□□ 0.1
CDK5RAP3-217ENST00000580287 CCDC191Q8NCU4 936 aa15.65■□□□□ 0.1
CDK5RAP3-217ENST00000580287 CHMP3Q9Y3E7 222 aa15.65■□□□□ 0.1
CDK5RAP3-217ENST00000580287 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.65■□□□□ 0.1
CDK5RAP3-217ENST00000580287 ARFGEF2Q9Y6D5 1785 aa15.65■□□□□ 0.1
CDK5RAP3-217ENST00000580287 PHF14O94880 888 aa15.64■□□□□ 0.1
CDK5RAP3-217ENST00000580287 LMBR1LQ6UX01 489 aa15.64■□□□□ 0.1
CDK5RAP3-217ENST00000580287 UBN2Q6ZU65 1347 aa15.64■□□□□ 0.09
CDK5RAP3-217ENST00000580287 BTAF1O14981 1849 aa15.64■□□□□ 0.09
CDK5RAP3-217ENST00000580287 CAMTA2O94983 1202 aa15.64■□□□□ 0.09
CDK5RAP3-217ENST00000580287 PDIA4P13667 645 aaKnown RBP15.64■□□□□ 0.09
CDK5RAP3-217ENST00000580287 NLRP10Q86W26 655 aa15.64■□□□□ 0.09
CDK5RAP3-217ENST00000580287 BRWD3Q6RI45 1802 aa15.64■□□□□ 0.09
CDK5RAP3-217ENST00000580287 SRP68Q9UHB9 627 aaKnown RBP15.64■□□□□ 0.09
CDK5RAP3-217ENST00000580287 FOXO4P98177 505 aa15.63■□□□□ 0.09
CDK5RAP3-217ENST00000580287 PROM2Q8N271 834 aa15.63■□□□□ 0.09
CDK5RAP3-217ENST00000580287 MTX1Q13505 466 aa15.63■□□□□ 0.09
CDK5RAP3-217ENST00000580287 BICDL1Q6ZP65 573 aa15.63■□□□□ 0.09
CDK5RAP3-217ENST00000580287 COL15A1P39059 1388 aa15.62■□□□□ 0.09
CDK5RAP3-217ENST00000580287 PLEKHM2Q8IWE5 1019 aa15.62■□□□□ 0.09
CDK5RAP3-217ENST00000580287 LRRCC1Q9C099 1032 aa15.62■□□□□ 0.09
CDK5RAP3-217ENST00000580287 N4BP2Q86UW6 1770 aaPredicted RBP15.62■□□□□ 0.09
CDK5RAP3-217ENST00000580287 OS9Q13438 667 aaPredicted RBP15.62■□□□□ 0.09
CDK5RAP3-217ENST00000580287 TRMT112Q9UI30 125 aaKnown RBP15.62■□□□□ 0.09
CDK5RAP3-217ENST00000580287 BRPF3Q9ULD4 1205 aa15.62■□□□□ 0.09
CDK5RAP3-217ENST00000580287 IBTKQ9P2D0 1353 aaPredicted RBP15.62■□□□□ 0.09
CDK5RAP3-217ENST00000580287 ERVV-1B6SEH8 477 aa15.61■□□□□ 0.09
CDK5RAP3-217ENST00000580287 GSE1Q14687 1217 aa15.61■□□□□ 0.09
CDK5RAP3-217ENST00000580287 SUSD4Q5VX71 490 aa15.61■□□□□ 0.09
CDK5RAP3-217ENST00000580287 TRIM28Q13263 835 aaKnown RBP15.61■□□□□ 0.09
CDK5RAP3-217ENST00000580287 NHSQ6T4R5 1651 aa15.61■□□□□ 0.09
CDK5RAP3-217ENST00000580287 NUTM1Q86Y26 1132 aa15.61■□□□□ 0.09
CDK5RAP3-217ENST00000580287 ZNF594Q96JF6 807 aaPredicted RBP15.61■□□□□ 0.09
CDK5RAP3-217ENST00000580287 TBC1D32Q96NH3 1257 aa15.61■□□□□ 0.09
CDK5RAP3-217ENST00000580287 APBA3O96018 575 aa15.6■□□□□ 0.09
CDK5RAP3-217ENST00000580287 BECN1Q14457 450 aa15.6■□□□□ 0.09
CDK5RAP3-217ENST00000580287 USPL1Q5W0Q7 1092 aa15.6■□□□□ 0.09
CDK5RAP3-217ENST00000580287 ZNF34Q8IZ26 560 aa15.6■□□□□ 0.09
CDK5RAP3-217ENST00000580287 RHPN1Q8TCX5 695 aa15.6■□□□□ 0.09
CDK5RAP3-217ENST00000580287 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.6■□□□□ 0.09
CDK5RAP3-217ENST00000580287 NIP7Q9Y221 180 aaKnown RBP eCLIP15.6■□□□□ 0.09
CDK5RAP3-217ENST00000580287 NUP188Q5SRE5 1749 aa15.6■□□□□ 0.09
CDK5RAP3-217ENST00000580287 ZBTB38Q8NAP3 1195 aaPredicted RBP15.6■□□□□ 0.09
CDK5RAP3-217ENST00000580287 ARHGEF1Q92888 912 aaKnown RBP15.6■□□□□ 0.09
CDK5RAP3-217ENST00000580287 CNTNAP4Q9C0A0 1308 aa15.59■□□□□ 0.09
CDK5RAP3-217ENST00000580287 RPS6KA4O75676 772 aa15.59■□□□□ 0.09
CDK5RAP3-217ENST00000580287 HCLS1P14317 486 aaPredicted RBP15.59■□□□□ 0.09
CDK5RAP3-217ENST00000580287 HDAC5Q9UQL6 1122 aa15.59■□□□□ 0.09
CDK5RAP3-217ENST00000580287 RTCBQ9Y3I0 505 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP3-217ENST00000580287 SBF2Q86WG5 1849 aa15.59■□□□□ 0.09
CDK5RAP3-217ENST00000580287 GOLGB1Q14789 3259 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP3-217ENST00000580287 RFX5P48382 616 aaPredicted RBP15.59■□□□□ 0.09
CDK5RAP3-217ENST00000580287 PTPN12Q05209 780 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP3-217ENST00000580287 RABL6Q3YEC7 729 aaPredicted RBP15.59■□□□□ 0.09
CDK5RAP3-217ENST00000580287 BCL2L12Q9HB09 334 aa15.59■□□□□ 0.09
CDK5RAP3-217ENST00000580287 SASH1O94885 1247 aa15.58■□□□□ 0.08
CDK5RAP3-217ENST00000580287 PCCAP05165 728 aaPredicted RBP15.58■□□□□ 0.08
CDK5RAP3-217ENST00000580287 GSPT1P15170 499 aaKnown RBP15.58■□□□□ 0.08
CDK5RAP3-217ENST00000580287 TXNRD1Q16881 649 aa15.58■□□□□ 0.08
CDK5RAP3-217ENST00000580287 HSP90AB3PQ58FF7 597 aa15.58■□□□□ 0.08
CDK5RAP3-217ENST00000580287 CCDC24Q8N4L8 307 aa15.58■□□□□ 0.08
CDK5RAP3-217ENST00000580287 TBC1D2Q9BYX2 928 aa15.58■□□□□ 0.08
CDK5RAP3-217ENST00000580287 C22orf23Q9BZE7 217 aa15.58■□□□□ 0.08
CDK5RAP3-217ENST00000580287 AFDNP55196 1824 aaKnown RBP15.58■□□□□ 0.08
CDK5RAP3-217ENST00000580287 FBXO3Q9UK99 471 aa15.58■□□□□ 0.08
CDK5RAP3-217ENST00000580287 RC3H1Q5TC82 1133 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP3-217ENST00000580287 AK7Q96M32 723 aa15.57■□□□□ 0.08
CDK5RAP3-217ENST00000580287 IRS4O14654 1257 aaPredicted RBP15.57■□□□□ 0.08
CDK5RAP3-217ENST00000580287 TBC1D9BQ66K14 1250 aa15.57■□□□□ 0.08
CDK5RAP3-217ENST00000580287 G3BP1Q13283 466 aaKnown RBP eCLIP15.56■□□□□ 0.08
CDK5RAP3-217ENST00000580287 PDE1AP54750 535 aa15.56■□□□□ 0.08
CDK5RAP3-217ENST00000580287 KIF1BPQ96EK5 621 aa15.56■□□□□ 0.08
CDK5RAP3-217ENST00000580287 PUS3Q9BZE2 481 aaKnown RBP15.56■□□□□ 0.08
CDK5RAP3-217ENST00000580287 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-217ENST00000580287 RAB11FIP3O75154 756 aa15.55■□□□□ 0.08
CDK5RAP3-217ENST00000580287 ZPR1O75312 459 aa15.55■□□□□ 0.08
CDK5RAP3-217ENST00000580287 LRRC24Q50LG9 513 aa15.55■□□□□ 0.08
CDK5RAP3-217ENST00000580287 BMP2KLQ5H9B9 411 aa15.55■□□□□ 0.08
CDK5RAP3-217ENST00000580287 TRAPPC3LQ5T215 181 aa15.55■□□□□ 0.08
CDK5RAP3-217ENST00000580287 GREM2Q9H772 168 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms