RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 CHMP4AQ9BY43 222 aa24.03■■□□□ 1.44
PPP4R1-215ENST00000580182 ZNF219Q9P2Y4 722 aaPredicted RBP24.03■■□□□ 1.44
PPP4R1-215ENST00000580182 ARFGEF2Q9Y6D5 1785 aa24.03■■□□□ 1.44
PPP4R1-215ENST00000580182 G2E3Q7L622 706 aa24.02■■□□□ 1.44
PPP4R1-215ENST00000580182 SYNE4Q8N205 404 aa24.02■■□□□ 1.44
PPP4R1-215ENST00000580182 ISCA1Q9BUE6 129 aa24.02■■□□□ 1.44
PPP4R1-215ENST00000580182 STK31Q9BXU1 1019 aa24.02■■□□□ 1.44
PPP4R1-215ENST00000580182 SLC4A2P04920 1241 aa24.01■■□□□ 1.43
PPP4R1-215ENST00000580182 C3orf67Q6ZVT6 689 aa24.01■■□□□ 1.43
PPP4R1-215ENST00000580182 NPR1P16066 1061 aa24■■□□□ 1.43
PPP4R1-215ENST00000580182 ZNF784Q8NCA9 323 aaPredicted RBP24■■□□□ 1.43
PPP4R1-215ENST00000580182 CNKSR1Q969H4 720 aa24■■□□□ 1.43
PPP4R1-215ENST00000580182 SLX4Q8IY92 1834 aa24■■□□□ 1.43
PPP4R1-215ENST00000580182 CACNA1SQ13698 1873 aa24■■□□□ 1.43
PPP4R1-215ENST00000580182 C21orf2O43822 256 aa23.99■■□□□ 1.43
PPP4R1-215ENST00000580182 PRPF40BQ6NWY9 871 aaKnown RBP23.99■■□□□ 1.43
PPP4R1-215ENST00000580182 TRMT112Q9UI30 125 aaKnown RBP23.99■■□□□ 1.43
PPP4R1-215ENST00000580182 RASSF7Q02833 373 aa23.98■■□□□ 1.43
PPP4R1-215ENST00000580182 CRY2Q49AN0 593 aa23.98■■□□□ 1.43
PPP4R1-215ENST00000580182 CDCA7LQ96GN5 454 aa23.98■■□□□ 1.43
PPP4R1-215ENST00000580182 MYD88Q99836 296 aa23.98■■□□□ 1.43
PPP4R1-215ENST00000580182 RIC1Q4ADV7 1423 aa23.98■■□□□ 1.43
PPP4R1-215ENST00000580182 SLC10A5Q5PT55 438 aa23.97■■□□□ 1.43
PPP4R1-215ENST00000580182 MAP3K2Q9Y2U5 619 aa23.97■■□□□ 1.43
PPP4R1-215ENST00000580182 PI4KAP2A4QPH2 592 aa23.96■■□□□ 1.43
PPP4R1-215ENST00000580182 DDX58O95786 925 aaKnown RBP23.96■■□□□ 1.43
PPP4R1-215ENST00000580182 HCLS1P14317 486 aaPredicted RBP23.96■■□□□ 1.43
PPP4R1-215ENST00000580182 SLFN5Q08AF3 891 aa23.96■■□□□ 1.43
PPP4R1-215ENST00000580182 PI4KAP1Q8N8J0 262 aa23.96■■□□□ 1.43
PPP4R1-215ENST00000580182 ADCY9O60503 1353 aa23.95■■□□□ 1.42
PPP4R1-215ENST00000580182 E9PSI1 815 aa23.95■■□□□ 1.42
PPP4R1-215ENST00000580182 KSR2Q6VAB6 950 aa23.95■■□□□ 1.42
PPP4R1-215ENST00000580182 FAM89AQ96GI7 184 aa23.95■■□□□ 1.42
PPP4R1-215ENST00000580182 METTL22Q9BUU2 404 aaPredicted RBP23.95■■□□□ 1.42
PPP4R1-215ENST00000580182 RNF123Q5XPI4 1314 aa23.94■■□□□ 1.42
PPP4R1-215ENST00000580182 SH3TC1Q8TE82 1336 aa23.94■■□□□ 1.42
PPP4R1-215ENST00000580182 PRELPP51888 382 aa23.94■■□□□ 1.42
PPP4R1-215ENST00000580182 TRIM28Q13263 835 aaKnown RBP23.94■■□□□ 1.42
PPP4R1-215ENST00000580182 RTL5Q5HYW3 569 aaPredicted RBP23.94■■□□□ 1.42
PPP4R1-215ENST00000580182 C9orf131Q5VYM1 1079 aa23.94■■□□□ 1.42
PPP4R1-215ENST00000580182 NLRP3Q96P20 1036 aa23.94■■□□□ 1.42
PPP4R1-215ENST00000580182 NFKBIEO00221 500 aa23.93■■□□□ 1.42
PPP4R1-215ENST00000580182 FLIIQ13045 1269 aa23.93■■□□□ 1.42
PPP4R1-215ENST00000580182 OLFM4Q6UX06 510 aa23.93■■□□□ 1.42
PPP4R1-215ENST00000580182 C7orf43Q8WVR3 580 aa23.93■■□□□ 1.42
PPP4R1-215ENST00000580182 RPGRQ92834 1020 aaKnown RBP23.93■■□□□ 1.42
PPP4R1-215ENST00000580182 ALDH1B1P30837 517 aa23.92■■□□□ 1.42
PPP4R1-215ENST00000580182 LAMB2P55268 1798 aa23.91■■□□□ 1.42
PPP4R1-215ENST00000580182 HOXA10P31260 410 aaPredicted RBP23.91■■□□□ 1.42
PPP4R1-215ENST00000580182 SBF1O95248 1867 aa23.91■■□□□ 1.42
PPP4R1-215ENST00000580182 IGKV5-2P06315 115 aa23.9■■□□□ 1.42
PPP4R1-215ENST00000580182 SLC51AQ86UW1 340 aa23.9■■□□□ 1.42
PPP4R1-215ENST00000580182 JARID2Q92833 1246 aaPredicted RBP23.9■■□□□ 1.42
PPP4R1-215ENST00000580182 RBM17Q96I25 401 aaKnown RBP23.9■■□□□ 1.42
PPP4R1-215ENST00000580182 RNF181Q9P0P0 153 aa23.9■■□□□ 1.42
PPP4R1-215ENST00000580182 DDX60Q8IY21 1712 aaKnown RBP23.9■■□□□ 1.42
PPP4R1-215ENST00000580182 FKBP5Q13451 457 aaPredicted RBP23.89■■□□□ 1.41
PPP4R1-215ENST00000580182 TRMT2AQ8IZ69 625 aaKnown RBP23.89■■□□□ 1.41
PPP4R1-215ENST00000580182 ZNF526Q8TF50 670 aaPredicted RBP23.89■■□□□ 1.41
PPP4R1-215ENST00000580182 FER1L6Q2WGJ9 1857 aa23.88■■□□□ 1.41
PPP4R1-215ENST00000580182 CWF19L2Q2TBE0 894 aaKnown RBP23.88■■□□□ 1.41
PPP4R1-215ENST00000580182 CCDC191Q8NCU4 936 aa23.88■■□□□ 1.41
PPP4R1-215ENST00000580182 CRAMP1Q96RY5 1269 aa23.88■■□□□ 1.41
PPP4R1-215ENST00000580182 CWC25Q9NXE8 425 aaPredicted RBP23.88■■□□□ 1.41
PPP4R1-215ENST00000580182 CACNA1FO60840 1977 aa23.87■■□□□ 1.41
PPP4R1-215ENST00000580182 ZBTB38Q8NAP3 1195 aaPredicted RBP23.87■■□□□ 1.41
PPP4R1-215ENST00000580182 IRS4O14654 1257 aaPredicted RBP23.86■■□□□ 1.41
PPP4R1-215ENST00000580182 LMNB1P20700 586 aa23.86■■□□□ 1.41
PPP4R1-215ENST00000580182 CCDC93Q567U6 631 aa23.86■■□□□ 1.41
PPP4R1-215ENST00000580182 ABCC4O15439 1325 aa23.85■■□□□ 1.41
PPP4R1-215ENST00000580182 PCCAP05165 728 aaPredicted RBP23.85■■□□□ 1.41
PPP4R1-215ENST00000580182 NEXNQ0ZGT2 675 aa23.85■■□□□ 1.41
PPP4R1-215ENST00000580182 SOGA3Q5TF21 947 aa23.85■■□□□ 1.41
PPP4R1-215ENST00000580182 DNAAF4Q8WXU2 420 aa23.85■■□□□ 1.41
PPP4R1-215ENST00000580182 TAOK3Q9H2K8 898 aa23.85■■□□□ 1.41
PPP4R1-215ENST00000580182 CCDC88AQ3V6T2 1871 aa23.85■■□□□ 1.41
PPP4R1-215ENST00000580182 NEURL1BA8MQ27 555 aa23.84■■□□□ 1.41
PPP4R1-215ENST00000580182 F6X3S4 739 aa23.84■■□□□ 1.41
PPP4R1-215ENST00000580182 PPEF1O14829 653 aaPredicted RBP23.84■■□□□ 1.41
PPP4R1-215ENST00000580182 TAF1P21675 1872 aa23.83■■□□□ 1.4
PPP4R1-215ENST00000580182 LTBP3Q9NS15 1303 aa23.83■■□□□ 1.4
PPP4R1-215ENST00000580182 HNRNPUQ00839 825 aaKnown RBP eCLIP23.82■■□□□ 1.4
PPP4R1-215ENST00000580182 SF3B3Q15393 1217 aaKnown RBP23.82■■□□□ 1.4
PPP4R1-215ENST00000580182 MRPL50Q8N5N7 158 aaKnown RBP23.82■■□□□ 1.4
PPP4R1-215ENST00000580182 SNED1Q8TER0 1413 aa23.82■■□□□ 1.4
PPP4R1-215ENST00000580182 DDX46Q7L014 1031 aaKnown RBP23.81■■□□□ 1.4
PPP4R1-215ENST00000580182 SSH1Q8WYL5 1049 aa23.81■■□□□ 1.4
PPP4R1-215ENST00000580182 GPBP1L1Q9HC44 474 aaPredicted RBP23.81■■□□□ 1.4
PPP4R1-215ENST00000580182 COL4A1P02462 1669 aa23.8■■□□□ 1.4
PPP4R1-215ENST00000580182 FKBP4Q02790 459 aaKnown RBP eCLIP23.8■■□□□ 1.4
PPP4R1-215ENST00000580182 RTKN2Q8IZC4 609 aa23.8■■□□□ 1.4
PPP4R1-215ENST00000580182 BCL2L13Q9BXK5 485 aa23.8■■□□□ 1.4
PPP4R1-215ENST00000580182 GRAPQ13588 217 aa23.79■■□□□ 1.4
PPP4R1-215ENST00000580182 GCKRQ14397 625 aa23.79■■□□□ 1.4
PPP4R1-215ENST00000580182 LINS1Q8NG48 757 aa23.79■■□□□ 1.4
PPP4R1-215ENST00000580182 GRAPLQ8TC17 118 aaPredicted RBP23.79■■□□□ 1.4
PPP4R1-215ENST00000580182 ZNF277Q9NRM2 450 aaPredicted RBP23.79■■□□□ 1.4
PPP4R1-215ENST00000580182 PDE8AO60658 829 aa23.78■■□□□ 1.4
PPP4R1-215ENST00000580182 CELF1Q92879 486 aaKnown RBP23.78■■□□□ 1.4
PPP4R1-215ENST00000580182 CCDC85AQ96PX6 553 aaPredicted RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms