RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 MASTLQ96GX5 879 aa18.6■□□□□ 0.57
MKS1-207ENST00000578789 ISCA1Q9BUE6 129 aa18.6■□□□□ 0.57
MKS1-207ENST00000578789 LAMB2P55268 1798 aa18.6■□□□□ 0.57
MKS1-207ENST00000578789 SLX4Q8IY92 1834 aa18.59■□□□□ 0.57
MKS1-207ENST00000578789 CRY2Q49AN0 593 aa18.59■□□□□ 0.57
MKS1-207ENST00000578789 UTP14AQ9BVJ6 771 aaKnown RBP18.59■□□□□ 0.57
MKS1-207ENST00000578789 UTRNP46939 3433 aa18.59■□□□□ 0.57
MKS1-207ENST00000578789 ADCY9O60503 1353 aa18.58■□□□□ 0.57
MKS1-207ENST00000578789 DDX60Q8IY21 1712 aaKnown RBP18.58■□□□□ 0.57
MKS1-207ENST00000578789 E9PSI1 815 aa18.58■□□□□ 0.56
MKS1-207ENST00000578789 NPR1P16066 1061 aa18.58■□□□□ 0.56
MKS1-207ENST00000578789 RIC3Q7Z5B4 369 aa18.58■□□□□ 0.56
MKS1-207ENST00000578789 CNKSR1Q969H4 720 aa18.58■□□□□ 0.56
MKS1-207ENST00000578789 ZNF622Q969S3 477 aaKnown RBP eCLIP18.58■□□□□ 0.568e-7■■■□□ 15.6
MKS1-207ENST00000578789 DDX58O95786 925 aaKnown RBP18.57■□□□□ 0.56
MKS1-207ENST00000578789 TRIM28Q13263 835 aaKnown RBP18.57■□□□□ 0.56
MKS1-207ENST00000578789 SLC10A5Q5PT55 438 aa18.57■□□□□ 0.56
MKS1-207ENST00000578789 SBF1O95248 1867 aa18.56■□□□□ 0.56
MKS1-207ENST00000578789 FER1L6Q2WGJ9 1857 aa18.56■□□□□ 0.56
MKS1-207ENST00000578789 TCERG1O14776 1098 aaKnown RBP18.56■□□□□ 0.56
MKS1-207ENST00000578789 SLC4A2P04920 1241 aa18.56■□□□□ 0.56
MKS1-207ENST00000578789 SLFN5Q08AF3 891 aa18.56■□□□□ 0.56
MKS1-207ENST00000578789 ARHGAP27Q6ZUM4 889 aa18.56■□□□□ 0.56
MKS1-207ENST00000578789 SH3TC1Q8TE82 1336 aa18.55■□□□□ 0.56
MKS1-207ENST00000578789 PRPF40BQ6NWY9 871 aaKnown RBP18.55■□□□□ 0.56
MKS1-207ENST00000578789 KSR2Q6VAB6 950 aa18.55■□□□□ 0.56
MKS1-207ENST00000578789 G2E3Q7L622 706 aa18.55■□□□□ 0.56
MKS1-207ENST00000578789 ATP5J2-PTCD1G3V325 749 aa18.54■□□□□ 0.56
MKS1-207ENST00000578789 FLIIQ13045 1269 aa18.54■□□□□ 0.56
MKS1-207ENST00000578789 METTL22Q9BUU2 404 aaPredicted RBP18.54■□□□□ 0.56
MKS1-207ENST00000578789 TRMT112Q9UI30 125 aaKnown RBP18.54■□□□□ 0.56
MKS1-207ENST00000578789 TRMT2AQ8IZ69 625 aaKnown RBP18.53■□□□□ 0.56
MKS1-207ENST00000578789 MYD88Q99836 296 aa18.53■□□□□ 0.56
MKS1-207ENST00000578789 MAP3K2Q9Y2U5 619 aa18.53■□□□□ 0.56
MKS1-207ENST00000578789 PI4KAP2A4QPH2 592 aa18.52■□□□□ 0.56
MKS1-207ENST00000578789 HOXA10P31260 410 aaPredicted RBP18.52■□□□□ 0.56
MKS1-207ENST00000578789 C3orf67Q6ZVT6 689 aa18.52■□□□□ 0.56
MKS1-207ENST00000578789 PI4KAP1Q8N8J0 262 aa18.52■□□□□ 0.56
MKS1-207ENST00000578789 CDCA7LQ96GN5 454 aa18.52■□□□□ 0.56
MKS1-207ENST00000578789 NLRP3Q96P20 1036 aa18.52■□□□□ 0.56
MKS1-207ENST00000578789 ALDH1B1P30837 517 aa18.51■□□□□ 0.55
MKS1-207ENST00000578789 ZNF784Q8NCA9 323 aaPredicted RBP18.51■□□□□ 0.55
MKS1-207ENST00000578789 CCDC191Q8NCU4 936 aa18.51■□□□□ 0.55
MKS1-207ENST00000578789 C7orf43Q8WVR3 580 aa18.51■□□□□ 0.55
MKS1-207ENST00000578789 NFKBIEO00221 500 aa18.5■□□□□ 0.55
MKS1-207ENST00000578789 C21orf2O43822 256 aa18.5■□□□□ 0.55
MKS1-207ENST00000578789 SOGA3Q5TF21 947 aa18.5■□□□□ 0.55
MKS1-207ENST00000578789 SYNE4Q8N205 404 aa18.5■□□□□ 0.55
MKS1-207ENST00000578789 RPGRQ92834 1020 aaKnown RBP18.5■□□□□ 0.55
MKS1-207ENST00000578789 CCDC88AQ3V6T2 1871 aa18.5■□□□□ 0.55
MKS1-207ENST00000578789 LTBP3Q9NS15 1303 aa18.49■□□□□ 0.55
MKS1-207ENST00000578789 SNED1Q8TER0 1413 aa18.49■□□□□ 0.55
MKS1-207ENST00000578789 TIAM2Q8IVF5 1701 aa18.49■□□□□ 0.55
MKS1-207ENST00000578789 DICER1Q9UPY3 1922 aaKnown RBP18.49■□□□□ 0.55
MKS1-207ENST00000578789 IGKV5-2P06315 115 aa18.49■□□□□ 0.55
MKS1-207ENST00000578789 HCLS1P14317 486 aaPredicted RBP18.49■□□□□ 0.55
MKS1-207ENST00000578789 RASSF7Q02833 373 aa18.49■□□□□ 0.55
MKS1-207ENST00000578789 FKBP5Q13451 457 aaPredicted RBP18.49■□□□□ 0.55
MKS1-207ENST00000578789 ZBTB38Q8NAP3 1195 aaPredicted RBP18.49■□□□□ 0.55
MKS1-207ENST00000578789 RBM17Q96I25 401 aaKnown RBP18.49■□□□□ 0.55
MKS1-207ENST00000578789 CRAMP1Q96RY5 1269 aa18.49■□□□□ 0.55
MKS1-207ENST00000578789 CWC25Q9NXE8 425 aaPredicted RBP18.49■□□□□ 0.55
MKS1-207ENST00000578789 PCCAP05165 728 aaPredicted RBP18.48■□□□□ 0.55
MKS1-207ENST00000578789 NEXNQ0ZGT2 675 aa18.48■□□□□ 0.55
MKS1-207ENST00000578789 ZNF428Q96B54 188 aa18.48■□□□□ 0.55
MKS1-207ENST00000578789 FAM89AQ96GI7 184 aa18.48■□□□□ 0.55
MKS1-207ENST00000578789 CCDC93Q567U6 631 aa18.47■□□□□ 0.55
MKS1-207ENST00000578789 C9orf131Q5VYM1 1079 aa18.47■□□□□ 0.55
MKS1-207ENST00000578789 DNAAF4Q8WXU2 420 aa18.47■□□□□ 0.55
MKS1-207ENST00000578789 ZNF219Q9P2Y4 722 aaPredicted RBP18.47■□□□□ 0.55
MKS1-207ENST00000578789 NEURL1BA8MQ27 555 aa18.46■□□□□ 0.55
MKS1-207ENST00000578789 PRELPP51888 382 aa18.46■□□□□ 0.55
MKS1-207ENST00000578789 MYH3P11055 1940 aa18.46■□□□□ 0.55
MKS1-207ENST00000578789 ABCC4O15439 1325 aa18.46■□□□□ 0.55
MKS1-207ENST00000578789 CDHR2Q9BYE9 1310 aa18.46■□□□□ 0.55
MKS1-207ENST00000578789 ZC3H4Q9UPT8 1303 aaKnown RBP18.46■□□□□ 0.55
MKS1-207ENST00000578789 LRRC37AA6NMS7 1700 aa18.46■□□□□ 0.55
MKS1-207ENST00000578789 IRS4O14654 1257 aaPredicted RBP18.45■□□□□ 0.54
MKS1-207ENST00000578789 CT47B1P0C2W7 299 aaPredicted RBP18.45■□□□□ 0.54
MKS1-207ENST00000578789 LMNB1P20700 586 aa18.45■□□□□ 0.54
MKS1-207ENST00000578789 SF3B3Q15393 1217 aaKnown RBP18.45■□□□□ 0.54
MKS1-207ENST00000578789 TAOK3Q9H2K8 898 aa18.45■□□□□ 0.54
MKS1-207ENST00000578789 RNF181Q9P0P0 153 aa18.45■□□□□ 0.54
MKS1-207ENST00000578789 TAF1P21675 1872 aa18.44■□□□□ 0.54
MKS1-207ENST00000578789 PPEF1O14829 653 aaPredicted RBP18.44■□□□□ 0.54
MKS1-207ENST00000578789 HSP90B1P14625 803 aaKnown RBP18.44■□□□□ 0.54
MKS1-207ENST00000578789 CWF19L2Q2TBE0 894 aaKnown RBP18.44■□□□□ 0.54
MKS1-207ENST00000578789 CC2D2BQ6DHV5 1058 aa18.44■□□□□ 0.54
MKS1-207ENST00000578789 MRPL50Q8N5N7 158 aaKnown RBP18.44■□□□□ 0.54
MKS1-207ENST00000578789 LINS1Q8NG48 757 aa18.44■□□□□ 0.54
MKS1-207ENST00000578789 HNRNPUQ00839 825 aaKnown RBP eCLIP18.43■□□□□ 0.54
MKS1-207ENST00000578789 ALDH1L2Q3SY69 923 aa18.43■□□□□ 0.54
MKS1-207ENST00000578789 RTL5Q5HYW3 569 aaPredicted RBP18.43■□□□□ 0.54
MKS1-207ENST00000578789 RTKN2Q8IZC4 609 aa18.43■□□□□ 0.54
MKS1-207ENST00000578789 COL4A1P02462 1669 aa18.42■□□□□ 0.54
MKS1-207ENST00000578789 FKBP4Q02790 459 aaKnown RBP eCLIP18.42■□□□□ 0.54
MKS1-207ENST00000578789 GRAPQ13588 217 aa18.42■□□□□ 0.54
MKS1-207ENST00000578789 OLFM4Q6UX06 510 aa18.42■□□□□ 0.54
MKS1-207ENST00000578789 DDX46Q7L014 1031 aaKnown RBP18.42■□□□□ 0.54
MKS1-207ENST00000578789 GRAPLQ8TC17 118 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms