RNA–Protein interactions for RNA: ENST00000578402.5

LIMD2-205, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-205ENST00000578402 KIF1BPQ96EK5 621 aa28.31■■■□□ 2.12
LIMD2-205ENST00000578402 CCNL1Q9UK58 526 aaPredicted RBP28.31■■■□□ 2.12
LIMD2-205ENST00000578402 TBC1D2BQ9UPU7 963 aa28.31■■■□□ 2.12
LIMD2-205ENST00000578402 APBB1O00213 710 aa28.3■■■□□ 2.12
LIMD2-205ENST00000578402 SMARCA5O60264 1052 aaPredicted RBP28.3■■■□□ 2.12
LIMD2-205ENST00000578402 ERC1Q8IUD2 1116 aa28.3■■■□□ 2.12
LIMD2-205ENST00000578402 NLRP10Q86W26 655 aa28.29■■■□□ 2.12
LIMD2-205ENST00000578402 ZBTB38Q8NAP3 1195 aaPredicted RBP28.29■■■□□ 2.12
LIMD2-205ENST00000578402 BCORQ6W2J9 1755 aa28.29■■■□□ 2.12
LIMD2-205ENST00000578402 TAF1LQ8IZX4 1826 aa28.29■■■□□ 2.12
LIMD2-205ENST00000578402 ZNF34Q8IZ26 560 aa28.28■■■□□ 2.12
LIMD2-205ENST00000578402 CDHR2Q9BYE9 1310 aa28.28■■■□□ 2.12
LIMD2-205ENST00000578402 CAMTA2O94983 1202 aa28.28■■■□□ 2.12
LIMD2-205ENST00000578402 FOXO4P98177 505 aa28.28■■■□□ 2.12
LIMD2-205ENST00000578402 RHPN1Q8TCX5 695 aa28.28■■■□□ 2.12
LIMD2-205ENST00000578402 PLA2G12BQ9BX93 195 aa28.28■■■□□ 2.12
LIMD2-205ENST00000578402 OSBPL3Q9H4L5 887 aa28.28■■■□□ 2.12
LIMD2-205ENST00000578402 C16orf71Q8IYS4 520 aaPredicted RBP28.26■■■□□ 2.11
LIMD2-205ENST00000578402 JARID2Q92833 1246 aaPredicted RBP28.26■■■□□ 2.11
LIMD2-205ENST00000578402 COPRSQ9NQ92 184 aa28.26■■■□□ 2.11
LIMD2-205ENST00000578402 SALL3Q9BXA9 1300 aa28.25■■■□□ 2.11
LIMD2-205ENST00000578402 ZNF652Q9Y2D9 606 aa28.25■■■□□ 2.11
LIMD2-205ENST00000578402 RPS6KA4O75676 772 aa28.24■■■□□ 2.11
LIMD2-205ENST00000578402 HMGB2P26583 209 aaKnown RBP28.24■■■□□ 2.11
LIMD2-205ENST00000578402 RFX5P48382 616 aaPredicted RBP28.24■■■□□ 2.11
LIMD2-205ENST00000578402 CLEC4GQ6UXB4 293 aa28.24■■■□□ 2.11
LIMD2-205ENST00000578402 OS9Q13438 667 aaPredicted RBP28.23■■■□□ 2.11
LIMD2-205ENST00000578402 TTC22Q5TAA0 569 aa28.23■■■□□ 2.11
LIMD2-205ENST00000578402 SCN7AQ01118 1682 aa28.23■■■□□ 2.11
LIMD2-205ENST00000578402 GPTP24298 496 aa28.23■■■□□ 2.11
LIMD2-205ENST00000578402 G3BP1Q13283 466 aaKnown RBP eCLIP28.23■■■□□ 2.11
LIMD2-205ENST00000578402 PARP10Q53GL7 1025 aa28.23■■■□□ 2.11
LIMD2-205ENST00000578402 LMBR1LQ6UX01 489 aa28.23■■■□□ 2.11
LIMD2-205ENST00000578402 OTUD7AQ8TE49 926 aaPredicted RBP28.23■■■□□ 2.11
LIMD2-205ENST00000578402 C4BP0C0L5 1744 aa28.22■■■□□ 2.11
LIMD2-205ENST00000578402 SLC27A3Q5K4L6 730 aa28.22■■■□□ 2.11
LIMD2-205ENST00000578402 PA2G4Q9UQ80 394 aaKnown RBP28.22■■■□□ 2.11
LIMD2-205ENST00000578402 AOX1Q06278 1338 aa28.21■■■□□ 2.11
LIMD2-205ENST00000578402 PDE1AP54750 535 aa28.21■■■□□ 2.11
LIMD2-205ENST00000578402 KCNQ4P56696 695 aa28.21■■■□□ 2.11
LIMD2-205ENST00000578402 STAP2Q9UGK3 403 aa28.21■■■□□ 2.11
LIMD2-205ENST00000578402 UBN2Q6ZU65 1347 aa28.21■■■□□ 2.11
LIMD2-205ENST00000578402 MX1P20591 662 aa28.2■■■□□ 2.1
LIMD2-205ENST00000578402 PTPN12Q05209 780 aaKnown RBP28.2■■■□□ 2.1
LIMD2-205ENST00000578402 FAM89AQ96GI7 184 aa28.19■■■□□ 2.1
LIMD2-205ENST00000578402 AK7Q96M32 723 aa28.19■■■□□ 2.1
LIMD2-205ENST00000578402 TRIM37O94972 964 aa28.18■■■□□ 2.1
LIMD2-205ENST00000578402 RTL5Q5HYW3 569 aaPredicted RBP28.18■■■□□ 2.1
LIMD2-205ENST00000578402 IL1RAPL2Q9NP60 686 aa28.18■■■□□ 2.1
LIMD2-205ENST00000578402 TRMT112Q9UI30 125 aaKnown RBP28.18■■■□□ 2.1
LIMD2-205ENST00000578402 RTCBQ9Y3I0 505 aaKnown RBP28.18■■■□□ 2.1
LIMD2-205ENST00000578402 GNPATO15228 680 aa28.18■■■□□ 2.1
LIMD2-205ENST00000578402 GSPT1P15170 499 aaKnown RBP28.18■■■□□ 2.1
LIMD2-205ENST00000578402 CLASRPQ8N2M8 674 aaKnown RBP28.18■■■□□ 2.1
LIMD2-205ENST00000578402 CSF1RP07333 972 aa28.17■■■□□ 2.1
LIMD2-205ENST00000578402 NARFQ9UHQ1 456 aa28.17■■■□□ 2.1
LIMD2-205ENST00000578402 SASH1O94885 1247 aa28.15■■■□□ 2.1
LIMD2-205ENST00000578402 USP42Q9H9J4 1324 aaKnown RBP28.15■■■□□ 2.1
LIMD2-205ENST00000578402 MYH3P11055 1940 aa28.14■■■□□ 2.1
LIMD2-205ENST00000578402 HSP90B1P14625 803 aaKnown RBP28.14■■■□□ 2.1
LIMD2-205ENST00000578402 UTP14AQ9BVJ6 771 aaKnown RBP28.14■■■□□ 2.1
LIMD2-205ENST00000578402 LRRC4BQ9NT99 713 aa28.14■■■□□ 2.1
LIMD2-205ENST00000578402 FBXO3Q9UK99 471 aa28.14■■■□□ 2.1
LIMD2-205ENST00000578402 CHMP3Q9Y3E7 222 aa28.14■■■□□ 2.1
LIMD2-205ENST00000578402 SH3TC1Q8TE82 1336 aa28.13■■■□□ 2.09
LIMD2-205ENST00000578402 IRS4O14654 1257 aaPredicted RBP28.13■■■□□ 2.09
LIMD2-205ENST00000578402 ADRA2BP18089 450 aa28.13■■■□□ 2.09
LIMD2-205ENST00000578402 BCL11AQ9H165 835 aa28.13■■■□□ 2.09
LIMD2-205ENST00000578402 NIP7Q9Y221 180 aaKnown RBP eCLIP28.13■■■□□ 2.09
LIMD2-205ENST00000578402 SUSD4Q5VX71 490 aa28.13■■■□□ 2.09
LIMD2-205ENST00000578402 KLHDC4Q8TBB5 520 aa28.13■■■□□ 2.09
LIMD2-205ENST00000578402 SIL1Q9H173 461 aa28.13■■■□□ 2.09
LIMD2-205ENST00000578402 TUBGCP6Q96RT7 1819 aa28.12■■■□□ 2.09
LIMD2-205ENST00000578402 LAMB2P55268 1798 aa28.12■■■□□ 2.09
LIMD2-205ENST00000578402 TTC41PQ6P2S7 1318 aa28.12■■■□□ 2.09
LIMD2-205ENST00000578402 PDE8AO60658 829 aa28.12■■■□□ 2.09
LIMD2-205ENST00000578402 PLSCR1O15162 318 aa28.11■■■□□ 2.09
LIMD2-205ENST00000578402 EIF5BO60841 1220 aaKnown RBP28.11■■■□□ 2.09
LIMD2-205ENST00000578402 CIAO1O76071 339 aa28.11■■■□□ 2.09
LIMD2-205ENST00000578402 CTSWP56202 376 aa28.11■■■□□ 2.09
LIMD2-205ENST00000578402 CCDC57Q2TAC2 916 aa28.11■■■□□ 2.09
LIMD2-205ENST00000578402 ZPR1O75312 459 aa28.1■■■□□ 2.09
LIMD2-205ENST00000578402 CDC45O75419 566 aa28.1■■■□□ 2.09
LIMD2-205ENST00000578402 NTSR2O95665 410 aa28.1■■■□□ 2.09
LIMD2-205ENST00000578402 C4AP0C0L4 1744 aa28.1■■■□□ 2.09
LIMD2-205ENST00000578402 NUTM1Q86Y26 1132 aa28.09■■■□□ 2.09
LIMD2-205ENST00000578402 TTLL11Q8NHH1 800 aa28.09■■■□□ 2.09
LIMD2-205ENST00000578402 IFIT2P09913 472 aaKnown RBP28.08■■■□□ 2.09
LIMD2-205ENST00000578402 IL15P40933 162 aaPredicted RBP28.08■■■□□ 2.09
LIMD2-205ENST00000578402 SYNE4Q8N205 404 aa28.08■■■□□ 2.09
LIMD2-205ENST00000578402 GPATCH3Q96I76 525 aa28.08■■■□□ 2.09
LIMD2-205ENST00000578402 UPF2Q9HAU5 1272 aaKnown RBP28.08■■■□□ 2.09
LIMD2-205ENST00000578402 BCL2L12Q9HB09 334 aa28.08■■■□□ 2.09
LIMD2-205ENST00000578402 UBR3Q6ZT12 1888 aa28.08■■■□□ 2.09
LIMD2-205ENST00000578402 EYA2O00167 538 aa28.08■■■□□ 2.08
LIMD2-205ENST00000578402 SDSP20132 328 aa28.08■■■□□ 2.08
LIMD2-205ENST00000578402 IFIT5Q13325 482 aaKnown RBP28.08■■■□□ 2.08
LIMD2-205ENST00000578402 TRAPPC3LQ5T215 181 aa28.08■■■□□ 2.08
LIMD2-205ENST00000578402 ARHGEF1Q92888 912 aaKnown RBP28.08■■■□□ 2.08
LIMD2-205ENST00000578402 COL24A1Q17RW2 1714 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms