RNA–Protein interactions for RNA: ENST00000578307.1

BPTF-211, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 2,121 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-211ENST00000578307 DMTNQ08495 405 aa11.65□□□□□ -0.54
BPTF-211ENST00000578307 SKOR2Q2VWA4 1001 aaPredicted RBP11.65□□□□□ -0.54
BPTF-211ENST00000578307 IL17RAQ96F46 866 aa11.65□□□□□ -0.54
BPTF-211ENST00000578307 CARD10Q9BWT7 1032 aa11.65□□□□□ -0.54
BPTF-211ENST00000578307 NHSL1Q5SYE7 1610 aa11.65□□□□□ -0.54
BPTF-211ENST00000578307 HSPA4P34932 840 aa11.65□□□□□ -0.55
BPTF-211ENST00000578307 PIP4K2AP48426 406 aaPredicted RBP11.65□□□□□ -0.55
BPTF-211ENST00000578307 KIAA1211Q6ZU35 1233 aa11.65□□□□□ -0.55
BPTF-211ENST00000578307 RUFY2Q8WXA3 655 aa11.65□□□□□ -0.55
BPTF-211ENST00000578307 DIAPH3Q9NSV4 1193 aa11.65□□□□□ -0.55
BPTF-211ENST00000578307 RAD50Q92878 1312 aa11.65□□□□□ -0.55
BPTF-211ENST00000578307 PAPPAQ13219 1627 aa11.64□□□□□ -0.55
BPTF-211ENST00000578307 SHANK3Q9BYB0 1731 aa11.64□□□□□ -0.55
BPTF-211ENST00000578307 GOLGA6L3A6NEY3 463 aa11.64□□□□□ -0.55
BPTF-211ENST00000578307 SASH1O94885 1247 aa11.64□□□□□ -0.55
BPTF-211ENST00000578307 EVA1CP58658 441 aa11.64□□□□□ -0.55
BPTF-211ENST00000578307 CLEC17AQ6ZS10 378 aa11.64□□□□□ -0.55
BPTF-211ENST00000578307 TEX2Q8IWB9 1127 aa11.64□□□□□ -0.55
BPTF-211ENST00000578307 GZF1Q9H116 711 aaPredicted RBP11.64□□□□□ -0.55
BPTF-211ENST00000578307 IL25Q9H293 177 aa11.64□□□□□ -0.55
BPTF-211ENST00000578307 KDM4FA0A1W2PPD8 638 aa11.63□□□□□ -0.55
BPTF-211ENST00000578307 CHRM1P11229 460 aaPredicted RBP11.63□□□□□ -0.55
BPTF-211ENST00000578307 NKX1-1Q15270 411 aaPredicted RBP11.63□□□□□ -0.55
BPTF-211ENST00000578307 CWC27Q6UX04 472 aaKnown RBP11.63□□□□□ -0.55
BPTF-211ENST00000578307 PLBD2Q8NHP8 589 aa11.63□□□□□ -0.55
BPTF-211ENST00000578307 EVI5LQ96CN4 794 aa11.63□□□□□ -0.55
BPTF-211ENST00000578307 STRN4Q9NRL3 753 aa11.63□□□□□ -0.55
BPTF-211ENST00000578307 COL15A1P39059 1388 aa11.63□□□□□ -0.55
BPTF-211ENST00000578307 PAXIP1Q6ZW49 1069 aaPredicted RBP11.63□□□□□ -0.55
BPTF-211ENST00000578307 TMX3Q96JJ7 454 aa11.63□□□□□ -0.55
BPTF-211ENST00000578307 SIL1Q9H173 461 aa11.63□□□□□ -0.55
BPTF-211ENST00000578307 BAG4O95429 457 aaKnown RBP11.62□□□□□ -0.55
BPTF-211ENST00000578307 CYP2E1P05181 493 aaPredicted RBP11.62□□□□□ -0.55
BPTF-211ENST00000578307 MRE11P49959 708 aa11.62□□□□□ -0.55
BPTF-211ENST00000578307 ZGPATQ8N5A5 531 aaKnown RBP11.62□□□□□ -0.55
BPTF-211ENST00000578307 EAF2Q96CJ1 260 aaPredicted RBP11.62□□□□□ -0.55
BPTF-211ENST00000578307 LSG1Q9H089 658 aaKnown RBP11.62□□□□□ -0.55
BPTF-211ENST00000578307 HIP1O00291 1037 aa11.62□□□□□ -0.55
BPTF-211ENST00000578307 XRCC6P12956 609 aaKnown RBP eCLIP11.62□□□□□ -0.55
BPTF-211ENST00000578307 EPHA10Q5JZY3 1008 aa11.62□□□□□ -0.55
BPTF-211ENST00000578307 UBE3BQ7Z3V4 1068 aa11.62□□□□□ -0.55
BPTF-211ENST00000578307 DDX54Q8TDD1 881 aaKnown RBP11.62□□□□□ -0.55
BPTF-211ENST00000578307 CCDC8Q9H0W5 538 aaPredicted RBP11.62□□□□□ -0.55
BPTF-211ENST00000578307 COPRSQ9NQ92 184 aa11.62□□□□□ -0.55
BPTF-211ENST00000578307 TAOK2Q9UL54 1235 aa11.62□□□□□ -0.55
BPTF-211ENST00000578307 NUP188Q5SRE5 1749 aa11.61□□□□□ -0.55
BPTF-211ENST00000578307 KCPQ6ZWJ8 1503 aa11.61□□□□□ -0.55
BPTF-211ENST00000578307 A0A087WZG4 1122 aa11.61□□□□□ -0.55
BPTF-211ENST00000578307 ATP5J2-PTCD1G3V325 749 aa11.61□□□□□ -0.55
BPTF-211ENST00000578307 PTCD1O75127 700 aaKnown RBP11.61□□□□□ -0.55
BPTF-211ENST00000578307 GTPBP4Q9BZE4 634 aaKnown RBP11.61□□□□□ -0.55
BPTF-211ENST00000578307 CUL4AQ13619 759 aa11.6□□□□□ -0.55
BPTF-211ENST00000578307 RABL6Q3YEC7 729 aaPredicted RBP11.6□□□□□ -0.55
BPTF-211ENST00000578307 KLHDC4Q8TBB5 520 aa11.6□□□□□ -0.55
BPTF-211ENST00000578307 INTS4Q96HW7 963 aaKnown RBP11.6□□□□□ -0.55
BPTF-211ENST00000578307 UPF3BQ9BZI7 483 aaKnown RBP11.6□□□□□ -0.55
BPTF-211ENST00000578307 NBPF26B4DH59 902 aa11.6□□□□□ -0.55
BPTF-211ENST00000578307 NBPF14Q5TI25 921 aa11.6□□□□□ -0.55
BPTF-211ENST00000578307 NBPF10Q6P3W6 841 aaKnown RBP11.6□□□□□ -0.55
BPTF-211ENST00000578307 NBPF15Q8N660 670 aa11.6□□□□□ -0.55
BPTF-211ENST00000578307 JARID2Q92833 1246 aaPredicted RBP11.6□□□□□ -0.55
BPTF-211ENST00000578307 SNX14Q9Y5W7 946 aa11.6□□□□□ -0.55
BPTF-211ENST00000578307 HOXD11P31277 338 aaPredicted RBP11.59□□□□□ -0.55
BPTF-211ENST00000578307 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.59□□□□□ -0.55
BPTF-211ENST00000578307 NOL8Q76FK4 1167 aaKnown RBP11.59□□□□□ -0.55
BPTF-211ENST00000578307 ATF5Q9Y2D1 282 aaPredicted RBP11.59□□□□□ -0.55
BPTF-211ENST00000578307 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.59□□□□□ -0.55
BPTF-211ENST00000578307 TOGARAM1Q9Y4F4 1720 aa11.59□□□□□ -0.55
BPTF-211ENST00000578307 LETM1O95202 739 aaPredicted RBP11.59□□□□□ -0.55
BPTF-211ENST00000578307 RFX5P48382 616 aaPredicted RBP11.59□□□□□ -0.55
BPTF-211ENST00000578307 PTPN12Q05209 780 aaKnown RBP11.59□□□□□ -0.55
BPTF-211ENST00000578307 PKP1Q13835 747 aa11.59□□□□□ -0.55
BPTF-211ENST00000578307 MCTP1Q6DN14 999 aa11.59□□□□□ -0.55
BPTF-211ENST00000578307 ANP32BQ92688 251 aaKnown RBP11.59□□□□□ -0.55
BPTF-211ENST00000578307 CWC25Q9NXE8 425 aaPredicted RBP11.59□□□□□ -0.55
BPTF-211ENST00000578307 TLR7Q9NYK1 1049 aaKnown RBP11.59□□□□□ -0.55
BPTF-211ENST00000578307 TNS2Q63HR2 1409 aa11.59□□□□□ -0.55
BPTF-211ENST00000578307 CASP7P55210 303 aa11.58□□□□□ -0.56
BPTF-211ENST00000578307 BOLA2Q9H3K6 86 aa11.58□□□□□ -0.56
BPTF-211ENST00000578307 TMEM51Q9NW97 253 aa11.58□□□□□ -0.56
BPTF-211ENST00000578307 TMOD3Q9NYL9 352 aa11.58□□□□□ -0.56
BPTF-211ENST00000578307 TJP1Q07157 1748 aa11.57□□□□□ -0.56
BPTF-211ENST00000578307 H7C1W4 665 aa11.57□□□□□ -0.56
BPTF-211ENST00000578307 A1BGP04217 495 aa11.57□□□□□ -0.56
BPTF-211ENST00000578307 TTLL7Q6ZT98 887 aa11.57□□□□□ -0.56
BPTF-211ENST00000578307 FSD1Q9BTV5 496 aa11.57□□□□□ -0.56
BPTF-211ENST00000578307 OFD1O75665 1012 aa11.57□□□□□ -0.56
BPTF-211ENST00000578307 TFCP2Q12800 502 aa11.57□□□□□ -0.56
BPTF-211ENST00000578307 KLHL40Q2TBA0 621 aa11.57□□□□□ -0.56
BPTF-211ENST00000578307 TNNI3KQ59H18 835 aa11.57□□□□□ -0.56
BPTF-211ENST00000578307 PPP4R3BQ5MIZ7 849 aa11.57□□□□□ -0.56
BPTF-211ENST00000578307 DDX49Q9Y6V7 483 aaKnown RBP11.57□□□□□ -0.56
BPTF-211ENST00000578307 FPGT-TNNI3KV9GXZ4 949 aa11.57□□□□□ -0.56
BPTF-211ENST00000578307 CCDC171Q6TFL3 1326 aa11.56□□□□□ -0.56
BPTF-211ENST00000578307 COL14A1Q05707 1796 aaKnown RBP11.56□□□□□ -0.56
BPTF-211ENST00000578307 NMIQ13287 307 aaPredicted RBP11.56□□□□□ -0.56
BPTF-211ENST00000578307 LMBR1LQ6UX01 489 aa11.56□□□□□ -0.56
BPTF-211ENST00000578307 RASEFQ8IZ41 740 aa11.56□□□□□ -0.56
BPTF-211ENST00000578307 CCDC191Q8NCU4 936 aa11.56□□□□□ -0.56
BPTF-211ENST00000578307 ZDHHC9Q9Y397 364 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms