RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 RPGRQ92834 1020 aaKnown RBP21.78■■□□□ 1.08
CDK5RAP3-206ENST00000578018 PRKRIP1Q9H875 184 aaPredicted RBP21.78■■□□□ 1.08
CDK5RAP3-206ENST00000578018 ADAMTS8Q9UP79 889 aa21.78■■□□□ 1.08
CDK5RAP3-206ENST00000578018 KRT24Q2M2I5 525 aa21.77■■□□□ 1.08
CDK5RAP3-206ENST00000578018 L3MBTL3Q96JM7 780 aaPredicted RBP21.77■■□□□ 1.08
CDK5RAP3-206ENST00000578018 ZNF541Q9H0D2 1346 aa21.77■■□□□ 1.07
CDK5RAP3-206ENST00000578018 LAMB2P55268 1798 aa21.76■■□□□ 1.07
CDK5RAP3-206ENST00000578018 C3orf67Q6ZVT6 689 aa21.76■■□□□ 1.07
CDK5RAP3-206ENST00000578018 PPP1R42Q7Z4L9 355 aa21.76■■□□□ 1.07
CDK5RAP3-206ENST00000578018 NECTIN2Q92692 538 aa21.76■■□□□ 1.07
CDK5RAP3-206ENST00000578018 PSMD1Q99460 953 aa21.76■■□□□ 1.07
CDK5RAP3-206ENST00000578018 IARSP41252 1262 aaKnown RBP21.75■■□□□ 1.07
CDK5RAP3-206ENST00000578018 XAGE3Q8WTP9 111 aa21.75■■□□□ 1.07
CDK5RAP3-206ENST00000578018 PCNTO95613 3336 aa21.74■■□□□ 1.07
CDK5RAP3-206ENST00000578018 POTEIP0CG38 1075 aa21.74■■□□□ 1.07
CDK5RAP3-206ENST00000578018 POTEJP0CG39 1038 aa21.74■■□□□ 1.07
CDK5RAP3-206ENST00000578018 CC2D2BQ6DHV5 1058 aa21.74■■□□□ 1.07
CDK5RAP3-206ENST00000578018 COPS6Q7L5N1 327 aa21.74■■□□□ 1.07
CDK5RAP3-206ENST00000578018 SYNE4Q8N205 404 aa21.74■■□□□ 1.07
CDK5RAP3-206ENST00000578018 JMYQ8N9B5 988 aa21.74■■□□□ 1.07
CDK5RAP3-206ENST00000578018 CRAMP1Q96RY5 1269 aa21.74■■□□□ 1.07
CDK5RAP3-206ENST00000578018 DDX21Q9NR30 783 aaKnown RBP eCLIP21.74■■□□□ 1.07
CDK5RAP3-206ENST00000578018 LAS1LQ9Y4W2 734 aaKnown RBP21.74■■□□□ 1.07
CDK5RAP3-206ENST00000578018 COL4A5P29400 1685 aa21.74■■□□□ 1.07
CDK5RAP3-206ENST00000578018 IQCA1LA6NCM1 817 aa21.73■■□□□ 1.07
CDK5RAP3-206ENST00000578018 SLC51AQ86UW1 340 aa21.73■■□□□ 1.07
CDK5RAP3-206ENST00000578018 RBM17Q96I25 401 aaKnown RBP21.73■■□□□ 1.07
CDK5RAP3-206ENST00000578018 UTP14AQ9BVJ6 771 aaKnown RBP21.73■■□□□ 1.07
CDK5RAP3-206ENST00000578018 RNF123Q5XPI4 1314 aa21.73■■□□□ 1.07
CDK5RAP3-206ENST00000578018 FZD9O00144 591 aa21.72■■□□□ 1.07
CDK5RAP3-206ENST00000578018 AIMP1Q12904 312 aaKnown RBP21.72■■□□□ 1.07
CDK5RAP3-206ENST00000578018 HSP90AB3PQ58FF7 597 aa21.72■■□□□ 1.07
CDK5RAP3-206ENST00000578018 SLC10A5Q5PT55 438 aa21.72■■□□□ 1.07
CDK5RAP3-206ENST00000578018 CHADLQ6NUI6 762 aa21.72■■□□□ 1.07
CDK5RAP3-206ENST00000578018 ADAMTSL1Q8N6G6 1762 aa21.71■■□□□ 1.07
CDK5RAP3-206ENST00000578018 PPEF1O14829 653 aaPredicted RBP21.71■■□□□ 1.07
CDK5RAP3-206ENST00000578018 HOXB7P09629 217 aa21.71■■□□□ 1.07
CDK5RAP3-206ENST00000578018 IFFO2Q5TF58 517 aa21.71■■□□□ 1.07
CDK5RAP3-206ENST00000578018 NLRP10Q86W26 655 aa21.71■■□□□ 1.07
CDK5RAP3-206ENST00000578018 TAF1DQ9H5J8 278 aaPredicted RBP21.71■■□□□ 1.07
CDK5RAP3-206ENST00000578018 CHPF2Q9P2E5 772 aa21.71■■□□□ 1.07
CDK5RAP3-206ENST00000578018 HDGFL1Q5TGJ6 251 aa21.7■■□□□ 1.06
CDK5RAP3-206ENST00000578018 CFAP44Q96MT7 982 aa21.7■■□□□ 1.06
CDK5RAP3-206ENST00000578018 NLRP3Q96P20 1036 aa21.7■■□□□ 1.06
CDK5RAP3-206ENST00000578018 TCIRG1Q13488 830 aa21.69■■□□□ 1.06
CDK5RAP3-206ENST00000578018 GRIPAP1Q4V328 841 aa21.69■■□□□ 1.06
CDK5RAP3-206ENST00000578018 LDHDQ86WU2 507 aa21.68■■□□□ 1.06
CDK5RAP3-206ENST00000578018 JDP2Q8WYK2 163 aa21.68■■□□□ 1.06
CDK5RAP3-206ENST00000578018 ABCC4O15439 1325 aa21.68■■□□□ 1.06
CDK5RAP3-206ENST00000578018 DDX60Q8IY21 1712 aaKnown RBP21.68■■□□□ 1.06
CDK5RAP3-206ENST00000578018 GPC2Q8N158 579 aa21.67■■□□□ 1.06
CDK5RAP3-206ENST00000578018 MBIPQ9NS73 344 aa21.67■■□□□ 1.06
CDK5RAP3-206ENST00000578018 HACL1Q9UJ83 578 aa21.67■■□□□ 1.06
CDK5RAP3-206ENST00000578018 SH3TC1Q8TE82 1336 aa21.66■■□□□ 1.06
CDK5RAP3-206ENST00000578018 TCERG1O14776 1098 aaKnown RBP21.66■■□□□ 1.06
CDK5RAP3-206ENST00000578018 DBF4Q9UBU7 674 aaPredicted RBP21.66■■□□□ 1.06
CDK5RAP3-206ENST00000578018 LTBP1Q14766 1721 aa21.66■■□□□ 1.06
CDK5RAP3-206ENST00000578018 TAF1P21675 1872 aa21.65■■□□□ 1.06
CDK5RAP3-206ENST00000578018 APAF1O14727 1248 aa21.65■■□□□ 1.06
CDK5RAP3-206ENST00000578018 ZNF853P0CG23 659 aa21.65■■□□□ 1.06
CDK5RAP3-206ENST00000578018 HCLS1P14317 486 aaPredicted RBP21.65■■□□□ 1.06
CDK5RAP3-206ENST00000578018 DUSP27Q5VZP5 1158 aa21.65■■□□□ 1.06
CDK5RAP3-206ENST00000578018 PLBD2Q8NHP8 589 aa21.65■■□□□ 1.06
CDK5RAP3-206ENST00000578018 TRMT112Q9UI30 125 aaKnown RBP21.65■■□□□ 1.06
CDK5RAP3-206ENST00000578018 ATP6V0A2Q9Y487 856 aa21.65■■□□□ 1.06
CDK5RAP3-206ENST00000578018 PASKQ96RG2 1323 aa21.64■■□□□ 1.05
CDK5RAP3-206ENST00000578018 EPHX2P34913 555 aa21.64■■□□□ 1.05
CDK5RAP3-206ENST00000578018 LARGE2Q8N3Y3 721 aa21.64■■□□□ 1.05
CDK5RAP3-206ENST00000578018 LRRC37AA6NMS7 1700 aa21.63■■□□□ 1.05
CDK5RAP3-206ENST00000578018 EAPPQ56P03 285 aaPredicted RBP21.63■■□□□ 1.05
CDK5RAP3-206ENST00000578018 CREBZFQ9NS37 354 aa21.63■■□□□ 1.05
CDK5RAP3-206ENST00000578018 IFT57Q9NWB7 429 aa21.63■■□□□ 1.05
CDK5RAP3-206ENST00000578018 EIF6P56537 245 aaKnown RBP21.62■■□□□ 1.05
CDK5RAP3-206ENST00000578018 ANKRD13DQ6ZTN6 518 aa21.62■■□□□ 1.05
CDK5RAP3-206ENST00000578018 ISCA1Q9BUE6 129 aa21.62■■□□□ 1.05
CDK5RAP3-206ENST00000578018 HYPKQ9NX55 129 aa21.62■■□□□ 1.05
CDK5RAP3-206ENST00000578018 BBOX1O75936 387 aa21.61■■□□□ 1.05
CDK5RAP3-206ENST00000578018 PNMA8AQ86V59 439 aaPredicted RBP21.61■■□□□ 1.05
CDK5RAP3-206ENST00000578018 ZNF428Q96B54 188 aa21.61■■□□□ 1.05
CDK5RAP3-206ENST00000578018 TMX4Q9H1E5 349 aaPredicted RBP21.61■■□□□ 1.05
CDK5RAP3-206ENST00000578018 PPIP5K2O43314 1243 aa21.6■■□□□ 1.05
CDK5RAP3-206ENST00000578018 GNAI1P63096 354 aa21.6■■□□□ 1.05
CDK5RAP3-206ENST00000578018 CALD1Q05682 793 aaKnown RBP21.6■■□□□ 1.05
CDK5RAP3-206ENST00000578018 DDX46Q7L014 1031 aaKnown RBP21.6■■□□□ 1.05
CDK5RAP3-206ENST00000578018 NIM1KQ8IY84 436 aa21.6■■□□□ 1.05
CDK5RAP3-206ENST00000578018 RTFDC1Q9BY42 306 aaPredicted RBP21.6■■□□□ 1.05
CDK5RAP3-206ENST00000578018 GJA3Q9Y6H8 435 aa21.6■■□□□ 1.05
CDK5RAP3-206ENST00000578018 DUOX1Q9NRD9 1551 aa21.6■■□□□ 1.05
CDK5RAP3-206ENST00000578018 ITGBL1O95965 494 aaPredicted RBP21.59■■□□□ 1.05
CDK5RAP3-206ENST00000578018 SCNN1DP51172 638 aa21.59■■□□□ 1.05
CDK5RAP3-206ENST00000578018 GRAPQ13588 217 aa21.59■■□□□ 1.05
CDK5RAP3-206ENST00000578018 AOC3Q16853 763 aa21.59■■□□□ 1.05
CDK5RAP3-206ENST00000578018 SP8Q8IXZ3 490 aa21.59■■□□□ 1.05
CDK5RAP3-206ENST00000578018 GRAPLQ8TC17 118 aaPredicted RBP21.59■■□□□ 1.05
CDK5RAP3-206ENST00000578018 VPS33BQ9H267 617 aa21.59■■□□□ 1.05
CDK5RAP3-206ENST00000578018 ATP5J2-PTCD1G3V325 749 aa21.58■■□□□ 1.05
CDK5RAP3-206ENST00000578018 SUPT20HQ8NEM7 779 aa21.58■■□□□ 1.05
CDK5RAP3-206ENST00000578018 CLEC11AQ9Y240 323 aa21.58■■□□□ 1.05
CDK5RAP3-206ENST00000578018 COL4A1P02462 1669 aa21.57■■□□□ 1.04
CDK5RAP3-206ENST00000578018 DPP8Q6V1X1 898 aaPredicted RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms