RNA–Protein interactions for RNA: ENST00000575934.5

ABR-233, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-233ENST00000575934 NECTIN2Q92692 538 aa26.69■■□□□ 1.86
ABR-233ENST00000575934 DDX21Q9NR30 783 aaKnown RBP eCLIP26.69■■□□□ 1.86
ABR-233ENST00000575934 DDNO94850 711 aaPredicted RBP26.68■■□□□ 1.86
ABR-233ENST00000575934 COPS6Q7L5N1 327 aa26.68■■□□□ 1.86
ABR-233ENST00000575934 ZNF277Q9NRM2 450 aaPredicted RBP26.68■■□□□ 1.86
ABR-233ENST00000575934 LAS1LQ9Y4W2 734 aaKnown RBP26.68■■□□□ 1.86
ABR-233ENST00000575934 RPGRQ92834 1020 aaKnown RBP26.67■■□□□ 1.86
ABR-233ENST00000575934 HOXB7P09629 217 aa26.66■■□□□ 1.86
ABR-233ENST00000575934 XAGE3Q8WTP9 111 aa26.66■■□□□ 1.86
ABR-233ENST00000575934 CFAP44Q96MT7 982 aa26.66■■□□□ 1.86
ABR-233ENST00000575934 HTRA3P83110 453 aa26.65■■□□□ 1.86
ABR-233ENST00000575934 HSP90AB3PQ58FF7 597 aa26.65■■□□□ 1.86
ABR-233ENST00000575934 CC2D2BQ6DHV5 1058 aa26.65■■□□□ 1.86
ABR-233ENST00000575934 CRAMP1Q96RY5 1269 aa26.65■■□□□ 1.86
ABR-233ENST00000575934 UTP14AQ9BVJ6 771 aaKnown RBP26.65■■□□□ 1.86
ABR-233ENST00000575934 RNF123Q5XPI4 1314 aa26.65■■□□□ 1.86
ABR-233ENST00000575934 IARSP41252 1262 aaKnown RBP26.64■■□□□ 1.86
ABR-233ENST00000575934 AIMP1Q12904 312 aaKnown RBP26.64■■□□□ 1.86
ABR-233ENST00000575934 SLC10A5Q5PT55 438 aa26.64■■□□□ 1.86
ABR-233ENST00000575934 C3orf67Q6ZVT6 689 aa26.64■■□□□ 1.86
ABR-233ENST00000575934 SYNE4Q8N205 404 aa26.64■■□□□ 1.86
ABR-233ENST00000575934 L3MBTL3Q96JM7 780 aaPredicted RBP26.64■■□□□ 1.86
ABR-233ENST00000575934 PSMD1Q99460 953 aa26.64■■□□□ 1.86
ABR-233ENST00000575934 CHPF2Q9P2E5 772 aa26.64■■□□□ 1.86
ABR-233ENST00000575934 RBM17Q96I25 401 aaKnown RBP26.63■■□□□ 1.85
ABR-233ENST00000575934 HDGFL1Q5TGJ6 251 aa26.62■■□□□ 1.85
ABR-233ENST00000575934 NLRP3Q96P20 1036 aa26.62■■□□□ 1.85
ABR-233ENST00000575934 ZNF541Q9H0D2 1346 aa26.62■■□□□ 1.85
ABR-233ENST00000575934 APAF1O14727 1248 aa26.61■■□□□ 1.85
ABR-233ENST00000575934 ZNF853P0CG23 659 aa26.61■■□□□ 1.85
ABR-233ENST00000575934 TCIRG1Q13488 830 aa26.61■■□□□ 1.85
ABR-233ENST00000575934 NLRP10Q86W26 655 aa26.61■■□□□ 1.85
ABR-233ENST00000575934 KLRG1Q96E93 195 aa26.61■■□□□ 1.85
ABR-233ENST00000575934 MBIPQ9NS73 344 aa26.61■■□□□ 1.85
ABR-233ENST00000575934 DDX60Q8IY21 1712 aaKnown RBP26.61■■□□□ 1.85
ABR-233ENST00000575934 COL4A5P29400 1685 aa26.6■■□□□ 1.85
ABR-233ENST00000575934 GRIPAP1Q4V328 841 aa26.6■■□□□ 1.85
ABR-233ENST00000575934 TAF1P21675 1872 aa26.59■■□□□ 1.85
ABR-233ENST00000575934 IQCA1LA6NCM1 817 aa26.59■■□□□ 1.85
ABR-233ENST00000575934 FZD9O00144 591 aa26.59■■□□□ 1.85
ABR-233ENST00000575934 PPEF1O14829 653 aaPredicted RBP26.59■■□□□ 1.85
ABR-233ENST00000575934 DBF4Q9UBU7 674 aaPredicted RBP26.59■■□□□ 1.85
ABR-233ENST00000575934 DUSP27Q5VZP5 1158 aa26.58■■□□□ 1.85
ABR-233ENST00000575934 ADAMTSL1Q8N6G6 1762 aa26.57■■□□□ 1.84
ABR-233ENST00000575934 SLC51AQ86UW1 340 aa26.57■■□□□ 1.84
ABR-233ENST00000575934 PLBD2Q8NHP8 589 aa26.57■■□□□ 1.84
ABR-233ENST00000575934 IFT57Q9NWB7 429 aa26.57■■□□□ 1.84
ABR-233ENST00000575934 POTEIP0CG38 1075 aa26.56■■□□□ 1.84
ABR-233ENST00000575934 POTEJP0CG39 1038 aa26.56■■□□□ 1.84
ABR-233ENST00000575934 CHADLQ6NUI6 762 aa26.56■■□□□ 1.84
ABR-233ENST00000575934 TAF1DQ9H5J8 278 aaPredicted RBP26.56■■□□□ 1.84
ABR-233ENST00000575934 ABCC4O15439 1325 aa26.56■■□□□ 1.84
ABR-233ENST00000575934 CALD1Q05682 793 aaKnown RBP26.55■■□□□ 1.84
ABR-233ENST00000575934 ANKRD13DQ6ZTN6 518 aa26.55■■□□□ 1.84
ABR-233ENST00000575934 JMYQ8N9B5 988 aa26.55■■□□□ 1.84
ABR-233ENST00000575934 SH3TC1Q8TE82 1336 aa26.55■■□□□ 1.84
ABR-233ENST00000575934 GNAI1P63096 354 aa26.54■■□□□ 1.84
ABR-233ENST00000575934 JDP2Q8WYK2 163 aa26.54■■□□□ 1.84
ABR-233ENST00000575934 HYPKQ9NX55 129 aa26.54■■□□□ 1.84
ABR-233ENST00000575934 TRMT112Q9UI30 125 aaKnown RBP26.54■■□□□ 1.84
ABR-233ENST00000575934 HCLS1P14317 486 aaPredicted RBP26.53■■□□□ 1.84
ABR-233ENST00000575934 ISCA1Q9BUE6 129 aa26.53■■□□□ 1.84
ABR-233ENST00000575934 ATP6V0A2Q9Y487 856 aa26.53■■□□□ 1.84
ABR-233ENST00000575934 LRRC37AA6NMS7 1700 aa26.52■■□□□ 1.84
ABR-233ENST00000575934 TCERG1O14776 1098 aaKnown RBP26.52■■□□□ 1.84
ABR-233ENST00000575934 LDHDQ86WU2 507 aa26.52■■□□□ 1.84
ABR-233ENST00000575934 GPC2Q8N158 579 aa26.52■■□□□ 1.84
ABR-233ENST00000575934 CCDC184Q52MB2 194 aa26.51■■□□□ 1.83
ABR-233ENST00000575934 HACL1Q9UJ83 578 aa26.51■■□□□ 1.83
ABR-233ENST00000575934 LTBP1Q14766 1721 aa26.51■■□□□ 1.83
ABR-233ENST00000575934 LARGE2Q8N3Y3 721 aa26.5■■□□□ 1.83
ABR-233ENST00000575934 BBOX1O75936 387 aa26.49■■□□□ 1.83
ABR-233ENST00000575934 ZEB1P37275 1124 aaPredicted RBP26.49■■□□□ 1.83
ABR-233ENST00000575934 EIF6P56537 245 aaKnown RBP26.49■■□□□ 1.83
ABR-233ENST00000575934 TMX4Q9H1E5 349 aaPredicted RBP26.49■■□□□ 1.83
ABR-233ENST00000575934 EPHX2P34913 555 aa26.48■■□□□ 1.83
ABR-233ENST00000575934 RTFDC1Q9BY42 306 aaPredicted RBP26.48■■□□□ 1.83
ABR-233ENST00000575934 ATP5J2-PTCD1G3V325 749 aa26.47■■□□□ 1.83
ABR-233ENST00000575934 GRAPQ13588 217 aa26.47■■□□□ 1.83
ABR-233ENST00000575934 DDX46Q7L014 1031 aaKnown RBP26.47■■□□□ 1.83
ABR-233ENST00000575934 SP8Q8IXZ3 490 aa26.47■■□□□ 1.83
ABR-233ENST00000575934 GRAPLQ8TC17 118 aaPredicted RBP26.47■■□□□ 1.83
ABR-233ENST00000575934 VPS33BQ9H267 617 aa26.47■■□□□ 1.83
ABR-233ENST00000575934 PASKQ96RG2 1323 aa26.46■■□□□ 1.83
ABR-233ENST00000575934 PPIP5K2O43314 1243 aa26.46■■□□□ 1.83
ABR-233ENST00000575934 TRIM28Q13263 835 aaKnown RBP26.46■■□□□ 1.83
ABR-233ENST00000575934 ZNF428Q96B54 188 aa26.46■■□□□ 1.83
ABR-233ENST00000575934 ELL2O00472 640 aaPredicted RBP26.45■■□□□ 1.82
ABR-233ENST00000575934 EAPPQ56P03 285 aaPredicted RBP26.45■■□□□ 1.82
ABR-233ENST00000575934 NIM1KQ8IY84 436 aa26.45■■□□□ 1.82
ABR-233ENST00000575934 C8orf58Q8NAV2 365 aa26.45■■□□□ 1.82
ABR-233ENST00000575934 FAM89AQ96GI7 184 aa26.45■■□□□ 1.82
ABR-233ENST00000575934 PHAXQ9H814 394 aaKnown RBP26.45■■□□□ 1.82
ABR-233ENST00000575934 CREBZFQ9NS37 354 aa26.45■■□□□ 1.82
ABR-233ENST00000575934 DUOX1Q9NRD9 1551 aa26.45■■□□□ 1.82
ABR-233ENST00000575934 AOC3Q16853 763 aa26.44■■□□□ 1.82
ABR-233ENST00000575934 IFFO2Q5TF58 517 aa26.44■■□□□ 1.82
ABR-233ENST00000575934 PNMA8AQ86V59 439 aaPredicted RBP26.44■■□□□ 1.82
ABR-233ENST00000575934 SUPT20HQ8NEM7 779 aa26.44■■□□□ 1.82
ABR-233ENST00000575934 GJA3Q9Y6H8 435 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms