RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 HUNKP57058 714 aa7.97□□□□□ -1.13
SMG6-219ENST00000575663 CDC37L1Q7L3B6 337 aa7.97□□□□□ -1.13
SMG6-219ENST00000575663 RPGRQ92834 1020 aaKnown RBP7.97□□□□□ -1.13
SMG6-219ENST00000575663 GLIS2Q9BZE0 524 aaPredicted RBP7.97□□□□□ -1.13
SMG6-219ENST00000575663 NYXQ9GZU5 481 aa7.97□□□□□ -1.13
SMG6-219ENST00000575663 TNRC18O15417 2968 aaPredicted RBP7.96□□□□□ -1.13
SMG6-219ENST00000575663 FAM177BA6PVY3 158 aa7.96□□□□□ -1.14
SMG6-219ENST00000575663 PPIP5K2O43314 1243 aa7.96□□□□□ -1.14
SMG6-219ENST00000575663 CRY2Q49AN0 593 aa7.96□□□□□ -1.14
SMG6-219ENST00000575663 CTU1Q7Z7A3 348 aaKnown RBP7.96□□□□□ -1.14
SMG6-219ENST00000575663 GAS2L2Q8NHY3 880 aa7.96□□□□□ -1.14
SMG6-219ENST00000575663 ZC3H15Q8WU90 426 aaKnown RBP7.96□□□□□ -1.14
SMG6-219ENST00000575663 NPC1L1Q9UHC9 1359 aa7.96□□□□□ -1.14
SMG6-219ENST00000575663 COL4A5P29400 1685 aa7.95□□□□□ -1.14
SMG6-219ENST00000575663 GNAT3A8MTJ3 354 aa7.95□□□□□ -1.14
SMG6-219ENST00000575663 PPEF1O14829 653 aaPredicted RBP7.95□□□□□ -1.14
SMG6-219ENST00000575663 RGMBQ6NW40 437 aa7.95□□□□□ -1.14
SMG6-219ENST00000575663 CCDC102AQ96A19 550 aa7.95□□□□□ -1.14
SMG6-219ENST00000575663 BCL2L13Q9BXK5 485 aa7.95□□□□□ -1.14
SMG6-219ENST00000575663 VPS33BQ9H267 617 aa7.95□□□□□ -1.14
SMG6-219ENST00000575663 PANK3Q9H999 370 aa7.95□□□□□ -1.14
SMG6-219ENST00000575663 RIC1Q4ADV7 1423 aa7.95□□□□□ -1.14
SMG6-219ENST00000575663 TRPM7Q96QT4 1865 aa7.94□□□□□ -1.14
SMG6-219ENST00000575663 BTBD11A6QL63 1104 aa7.94□□□□□ -1.14
SMG6-219ENST00000575663 PIP4K2AP48426 406 aaPredicted RBP7.94□□□□□ -1.14
SMG6-219ENST00000575663 GMPSP49915 693 aaPredicted RBP7.94□□□□□ -1.14
SMG6-219ENST00000575663 PKN2Q16513 984 aaKnown RBP7.94□□□□□ -1.14
SMG6-219ENST00000575663 AOC3Q16853 763 aa7.94□□□□□ -1.14
SMG6-219ENST00000575663 SUPT20HQ8NEM7 779 aa7.94□□□□□ -1.14
SMG6-219ENST00000575663 RBM17Q96I25 401 aaKnown RBP7.94□□□□□ -1.14
SMG6-219ENST00000575663 PGAP2Q9UHJ9 254 aa7.94□□□□□ -1.14
SMG6-219ENST00000575663 ZNRF3Q9ULT6 936 aa7.94□□□□□ -1.14
SMG6-219ENST00000575663 KNSTRNQ9Y448 316 aa7.94□□□□□ -1.14
SMG6-219ENST00000575663 KIF7Q2M1P5 1343 aa7.94□□□□□ -1.14
SMG6-219ENST00000575663 ABCC12Q96J65 1359 aa7.94□□□□□ -1.14
SMG6-219ENST00000575663 IBTKQ9P2D0 1353 aaPredicted RBP7.94□□□□□ -1.14
SMG6-219ENST00000575663 DIAPH1O60610 1272 aaKnown RBP7.93□□□□□ -1.14
SMG6-219ENST00000575663 TRPA1O75762 1119 aa7.93□□□□□ -1.14
SMG6-219ENST00000575663 ZNF157P51786 506 aaPredicted RBP7.93□□□□□ -1.14
SMG6-219ENST00000575663 TNIP1Q15025 636 aa7.93□□□□□ -1.14
SMG6-219ENST00000575663 REM2Q8IYK8 340 aaPredicted RBP7.93□□□□□ -1.14
SMG6-219ENST00000575663 C2orf69Q8N8R5 385 aa7.93□□□□□ -1.14
SMG6-219ENST00000575663 RNF186Q9NXI6 227 aa7.93□□□□□ -1.14
SMG6-219ENST00000575663 HPS5Q9UPZ3 1129 aa7.93□□□□□ -1.14
SMG6-219ENST00000575663 PDE4DIPQ5VU43 2346 aa7.92□□□□□ -1.14
SMG6-219ENST00000575663 FAM155AB1AL88 458 aaPredicted RBP7.92□□□□□ -1.14
SMG6-219ENST00000575663 H7C1D1 291 aa7.92□□□□□ -1.14
SMG6-219ENST00000575663 SNRPA1P09661 255 aaKnown RBP7.92□□□□□ -1.14
SMG6-219ENST00000575663 HOXA10P31260 410 aaPredicted RBP7.92□□□□□ -1.14
SMG6-219ENST00000575663 KIF23Q02241 960 aaPredicted RBP7.92□□□□□ -1.14
SMG6-219ENST00000575663 CXCL9Q07325 125 aa7.92□□□□□ -1.14
SMG6-219ENST00000575663 NUTM1Q86Y26 1132 aa7.92□□□□□ -1.14
SMG6-219ENST00000575663 IL17REQ8NFR9 667 aa7.92□□□□□ -1.14
SMG6-219ENST00000575663 TRPM4Q8TD43 1214 aa7.92□□□□□ -1.14
SMG6-219ENST00000575663 CRAMP1Q96RY5 1269 aa7.92□□□□□ -1.14
SMG6-219ENST00000575663 ZIC5Q96T25 663 aa7.92□□□□□ -1.14
SMG6-219ENST00000575663 GBA2Q9HCG7 927 aaPredicted RBP7.92□□□□□ -1.14
SMG6-219ENST00000575663 HDAC9Q9UKV0 1011 aa7.92□□□□□ -1.14
SMG6-219ENST00000575663 USP16Q9Y5T5 823 aa7.92□□□□□ -1.14
SMG6-219ENST00000575663 CEMIPQ8WUJ3 1361 aa7.92□□□□□ -1.14
SMG6-219ENST00000575663 CASP8AP2Q9UKL3 1982 aa7.91□□□□□ -1.14
SMG6-219ENST00000575663 TCERG1O14776 1098 aaKnown RBP7.91□□□□□ -1.14
SMG6-219ENST00000575663 SLC10A3P09131 477 aa7.91□□□□□ -1.14
SMG6-219ENST00000575663 HABP4Q5JVS0 413 aaKnown RBP7.91□□□□□ -1.14
SMG6-219ENST00000575663 KIF6Q6ZMV9 814 aa7.91□□□□□ -1.14
SMG6-219ENST00000575663 USP48Q86UV5 1035 aa7.91□□□□□ -1.14
SMG6-219ENST00000575663 RAD17O75943 681 aa7.9□□□□□ -1.14
SMG6-219ENST00000575663 HIRAP54198 1017 aaPredicted RBP7.9□□□□□ -1.14
SMG6-219ENST00000575663 HLFQ16534 295 aa7.9□□□□□ -1.14
SMG6-219ENST00000575663 DPP8Q6V1X1 898 aaPredicted RBP7.9□□□□□ -1.14
SMG6-219ENST00000575663 KRT26Q7Z3Y9 468 aa7.9□□□□□ -1.14
SMG6-219ENST00000575663 MICALL2Q8IY33 904 aa7.9□□□□□ -1.14
SMG6-219ENST00000575663 DCPSQ96C86 337 aaKnown RBP7.9□□□□□ -1.14
SMG6-219ENST00000575663 CNOT7Q9UIV1 285 aaKnown RBP7.9□□□□□ -1.14
SMG6-219ENST00000575663 ATP6V0A2Q9Y487 856 aa7.9□□□□□ -1.14
SMG6-219ENST00000575663 PRAMEF22A3QJZ6 481 aa7.89□□□□□ -1.15
SMG6-219ENST00000575663 ERVV-1B6SEH8 477 aa7.89□□□□□ -1.15
SMG6-219ENST00000575663 U2SURPO15042 1029 aaKnown RBP7.89□□□□□ -1.15
SMG6-219ENST00000575663 KCNQ3O43525 872 aa7.89□□□□□ -1.15
SMG6-219ENST00000575663 KIAA2012Q0VF49 1180 aa7.89□□□□□ -1.15
SMG6-219ENST00000575663 RTF1Q92541 710 aaKnown RBP7.89□□□□□ -1.15
SMG6-219ENST00000575663 NLRP3Q96P20 1036 aa7.89□□□□□ -1.15
SMG6-219ENST00000575663 RTFDC1Q9BY42 306 aaPredicted RBP7.89□□□□□ -1.15
SMG6-219ENST00000575663 MAP3K15Q6ZN16 1313 aa7.88□□□□□ -1.15
SMG6-219ENST00000575663 NBPF26B4DH59 902 aa7.88□□□□□ -1.15
SMG6-219ENST00000575663 ADM5C9JUS6 153 aa7.88□□□□□ -1.15
SMG6-219ENST00000575663 EIF4G2P78344 907 aaKnown RBP eCLIP7.88□□□□□ -1.15
SMG6-219ENST00000575663 NBPF10Q6P3W6 841 aaKnown RBP7.88□□□□□ -1.15
SMG6-219ENST00000575663 FBXO46Q6PJ61 603 aaPredicted RBP7.88□□□□□ -1.15
SMG6-219ENST00000575663 PPP1R42Q7Z4L9 355 aa7.88□□□□□ -1.15
SMG6-219ENST00000575663 SULF1Q8IWU6 871 aa7.88□□□□□ -1.15
SMG6-219ENST00000575663 MPNDQ8N594 471 aa7.88□□□□□ -1.15
SMG6-219ENST00000575663 DPF2Q92785 391 aa7.88□□□□□ -1.15
SMG6-219ENST00000575663 CSRNP1Q96S65 589 aa7.88□□□□□ -1.15
SMG6-219ENST00000575663 SIPA1L3O60292 1781 aaPredicted RBP7.88□□□□□ -1.15
SMG6-219ENST00000575663 ABCC4O15439 1325 aa7.87□□□□□ -1.15
SMG6-219ENST00000575663 UBN2Q6ZU65 1347 aa7.87□□□□□ -1.15
SMG6-219ENST00000575663 GPTP24298 496 aa7.87□□□□□ -1.15
SMG6-219ENST00000575663 RPS12P25398 132 aaKnown RBP7.87□□□□□ -1.15
SMG6-219ENST00000575663 FKBP1BP68106 108 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms