RNA–Protein interactions for RNA: ENST00000575379.1

CHRNB1-207, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-207ENST00000575379 COL4A5P29400 1685 aa23.86■■□□□ 1.41
CHRNB1-207ENST00000575379 RNF123Q5XPI4 1314 aa23.85■■□□□ 1.41
CHRNB1-207ENST00000575379 FZD9O00144 591 aa23.85■■□□□ 1.41
CHRNB1-207ENST00000575379 NTSR2O95665 410 aa23.85■■□□□ 1.41
CHRNB1-207ENST00000575379 PDIA6Q15084 440 aa23.85■■□□□ 1.41
CHRNB1-207ENST00000575379 LRP10Q7Z4F1 713 aa23.85■■□□□ 1.41
CHRNB1-207ENST00000575379 NECTIN2Q92692 538 aa23.85■■□□□ 1.41
CHRNB1-207ENST00000575379 CREBZFQ9NS37 354 aa23.85■■□□□ 1.41
CHRNB1-207ENST00000575379 HACL1Q9UJ83 578 aa23.85■■□□□ 1.41
CHRNB1-207ENST00000575379 IBTKQ9P2D0 1353 aaPredicted RBP23.85■■□□□ 1.41
CHRNB1-207ENST00000575379 ERBB4Q15303 1308 aa23.84■■□□□ 1.41
CHRNB1-207ENST00000575379 HOXA10P31260 410 aaPredicted RBP23.84■■□□□ 1.41
CHRNB1-207ENST00000575379 TMPOP42166 694 aaKnown RBP23.84■■□□□ 1.41
CHRNB1-207ENST00000575379 CCDC146Q8IYE0 955 aa23.84■■□□□ 1.41
CHRNB1-207ENST00000575379 RIC1Q4ADV7 1423 aa23.84■■□□□ 1.41
CHRNB1-207ENST00000575379 EPHX2P34913 555 aa23.83■■□□□ 1.41
CHRNB1-207ENST00000575379 RALBP1Q15311 655 aa23.83■■□□□ 1.41
CHRNB1-207ENST00000575379 PSMD1Q99460 953 aa23.83■■□□□ 1.41
CHRNB1-207ENST00000575379 CLEC11AQ9Y240 323 aa23.83■■□□□ 1.41
CHRNB1-207ENST00000575379 PASKQ96RG2 1323 aa23.83■■□□□ 1.4
CHRNB1-207ENST00000575379 NEUROD2Q15784 382 aa23.82■■□□□ 1.4
CHRNB1-207ENST00000575379 RBM17Q96I25 401 aaKnown RBP23.82■■□□□ 1.4
CHRNB1-207ENST00000575379 GJA3Q9Y6H8 435 aa23.82■■□□□ 1.4
CHRNB1-207ENST00000575379 PPEF1O14829 653 aaPredicted RBP23.81■■□□□ 1.4
CHRNB1-207ENST00000575379 DDX10Q13206 875 aaKnown RBP23.81■■□□□ 1.4
CHRNB1-207ENST00000575379 KRT24Q2M2I5 525 aa23.81■■□□□ 1.4
CHRNB1-207ENST00000575379 PPP1R42Q7Z4L9 355 aa23.81■■□□□ 1.4
CHRNB1-207ENST00000575379 JDP2Q8WYK2 163 aa23.81■■□□□ 1.4
CHRNB1-207ENST00000575379 ADAMTSL1Q8N6G6 1762 aa23.8■■□□□ 1.4
CHRNB1-207ENST00000575379 CAPN15O75808 1086 aa23.8■■□□□ 1.4
CHRNB1-207ENST00000575379 AIMP1Q12904 312 aaKnown RBP23.8■■□□□ 1.4
CHRNB1-207ENST00000575379 CC2D2BQ6DHV5 1058 aa23.8■■□□□ 1.4
CHRNB1-207ENST00000575379 GPC2Q8N158 579 aa23.8■■□□□ 1.4
CHRNB1-207ENST00000575379 CRAMP1Q96RY5 1269 aa23.8■■□□□ 1.4
CHRNB1-207ENST00000575379 ITGBL1O95965 494 aaPredicted RBP23.79■■□□□ 1.4
CHRNB1-207ENST00000575379 PARP10Q53GL7 1025 aa23.79■■□□□ 1.4
CHRNB1-207ENST00000575379 MAP1SQ66K74 1059 aaPredicted RBP23.79■■□□□ 1.4
CHRNB1-207ENST00000575379 TNS4Q8IZW8 715 aa23.79■■□□□ 1.4
CHRNB1-207ENST00000575379 LARGE2Q8N3Y3 721 aa23.79■■□□□ 1.4
CHRNB1-207ENST00000575379 ZNF428Q96B54 188 aa23.79■■□□□ 1.4
CHRNB1-207ENST00000575379 UTP14AQ9BVJ6 771 aaKnown RBP23.79■■□□□ 1.4
CHRNB1-207ENST00000575379 COPS6Q7L5N1 327 aa23.78■■□□□ 1.4
CHRNB1-207ENST00000575379 XAGE3Q8WTP9 111 aa23.78■■□□□ 1.4
CHRNB1-207ENST00000575379 LAS1LQ9Y4W2 734 aaKnown RBP23.78■■□□□ 1.4
CHRNB1-207ENST00000575379 LTBP1Q14766 1721 aa23.78■■□□□ 1.4
CHRNB1-207ENST00000575379 ANKRD36CQ5JPF3 1778 aa23.78■■□□□ 1.4
CHRNB1-207ENST00000575379 EIF6P56537 245 aaKnown RBP23.77■■□□□ 1.4
CHRNB1-207ENST00000575379 LMOD3Q0VAK6 560 aa23.77■■□□□ 1.4
CHRNB1-207ENST00000575379 NLRP3Q96P20 1036 aa23.77■■□□□ 1.4
CHRNB1-207ENST00000575379 LAMB2P55268 1798 aa23.77■■□□□ 1.4
CHRNB1-207ENST00000575379 CNTNAP1P78357 1384 aa23.77■■□□□ 1.4
CHRNB1-207ENST00000575379 PNMA8AQ86V59 439 aaPredicted RBP23.76■■□□□ 1.39
CHRNB1-207ENST00000575379 BABAM1Q9NWV8 329 aa23.76■■□□□ 1.39
CHRNB1-207ENST00000575379 MYBBP1AQ9BQG0 1328 aaKnown RBP23.76■■□□□ 1.39
CHRNB1-207ENST00000575379 TMEM88BA6NKF7 163 aa23.75■■□□□ 1.39
CHRNB1-207ENST00000575379 HCLS1P14317 486 aaPredicted RBP23.75■■□□□ 1.39
CHRNB1-207ENST00000575379 CNTROBQ8N137 903 aa23.75■■□□□ 1.39
CHRNB1-207ENST00000575379 ABCC4O15439 1325 aa23.75■■□□□ 1.39
CHRNB1-207ENST00000575379 SLC10A5Q5PT55 438 aa23.74■■□□□ 1.39
CHRNB1-207ENST00000575379 PPIP5K2O43314 1243 aa23.73■■□□□ 1.39
CHRNB1-207ENST00000575379 EPS15P42566 896 aa23.73■■□□□ 1.39
CHRNB1-207ENST00000575379 SCNN1DP51172 638 aa23.73■■□□□ 1.39
CHRNB1-207ENST00000575379 AOC3Q16853 763 aa23.73■■□□□ 1.39
CHRNB1-207ENST00000575379 NLRP10Q86W26 655 aa23.73■■□□□ 1.39
CHRNB1-207ENST00000575379 TRIM35Q9UPQ4 493 aa23.73■■□□□ 1.39
CHRNB1-207ENST00000575379 ATP6V0A2Q9Y487 856 aa23.73■■□□□ 1.39
CHRNB1-207ENST00000575379 TAF1P21675 1872 aa23.73■■□□□ 1.39
CHRNB1-207ENST00000575379 CHL1O00533 1208 aa23.72■■□□□ 1.39
CHRNB1-207ENST00000575379 VEGFBP49765 207 aa23.72■■□□□ 1.39
CHRNB1-207ENST00000575379 GRIPAP1Q4V328 841 aa23.72■■□□□ 1.39
CHRNB1-207ENST00000575379 CHPF2Q9P2E5 772 aa23.72■■□□□ 1.39
CHRNB1-207ENST00000575379 LMOD1P29536 600 aaPredicted RBP23.71■■□□□ 1.39
CHRNB1-207ENST00000575379 WDR43Q15061 677 aaKnown RBP eCLIP23.71■■□□□ 1.39
CHRNB1-207ENST00000575379 NIM1KQ8IY84 436 aa23.71■■□□□ 1.39
CHRNB1-207ENST00000575379 RUNDC1Q96C34 613 aa23.71■■□□□ 1.39
CHRNB1-207ENST00000575379 DDX21Q9NR30 783 aaKnown RBP eCLIP23.71■■□□□ 1.39
CHRNB1-207ENST00000575379 TRMT112Q9UI30 125 aaKnown RBP23.71■■□□□ 1.39
CHRNB1-207ENST00000575379 FMR1Q06787 632 aaKnown RBP eCLIP23.7■■□□□ 1.38
CHRNB1-207ENST00000575379 TCIRG1Q13488 830 aa23.7■■□□□ 1.38
CHRNB1-207ENST00000575379 HSP90AB3PQ58FF7 597 aa23.7■■□□□ 1.38
CHRNB1-207ENST00000575379 TMX4Q9H1E5 349 aaPredicted RBP23.7■■□□□ 1.38
CHRNB1-207ENST00000575379 FOXN1O15353 648 aa23.69■■□□□ 1.38
CHRNB1-207ENST00000575379 ADAMTS8Q9UP79 889 aa23.69■■□□□ 1.38
CHRNB1-207ENST00000575379 SH3TC1Q8TE82 1336 aa23.67■■□□□ 1.38
CHRNB1-207ENST00000575379 HDGFL1Q5TGJ6 251 aa23.67■■□□□ 1.38
CHRNB1-207ENST00000575379 DPP8Q6V1X1 898 aaPredicted RBP23.66■■□□□ 1.38
CHRNB1-207ENST00000575379 ABT1Q9ULW3 272 aaKnown RBP23.66■■□□□ 1.38
CHRNB1-207ENST00000575379 DDX60Q8IY21 1712 aaKnown RBP23.65■■□□□ 1.38
CHRNB1-207ENST00000575379 BBOX1O75936 387 aa23.65■■□□□ 1.38
CHRNB1-207ENST00000575379 CXCL9Q07325 125 aa23.65■■□□□ 1.38
CHRNB1-207ENST00000575379 DDX46Q7L014 1031 aaKnown RBP23.65■■□□□ 1.38
CHRNB1-207ENST00000575379 SP8Q8IXZ3 490 aa23.65■■□□□ 1.38
CHRNB1-207ENST00000575379 ATP5J2-PTCD1G3V325 749 aa23.64■■□□□ 1.37
CHRNB1-207ENST00000575379 TRAF5O00463 557 aa23.64■■□□□ 1.37
CHRNB1-207ENST00000575379 DEFB115Q30KQ5 88 aa23.64■■□□□ 1.37
CHRNB1-207ENST00000575379 MPNDQ8N594 471 aa23.64■■□□□ 1.37
CHRNB1-207ENST00000575379 RTFDC1Q9BY42 306 aaPredicted RBP23.64■■□□□ 1.37
CHRNB1-207ENST00000575379 ZNRF3Q9ULT6 936 aa23.64■■□□□ 1.37
CHRNB1-207ENST00000575379 RASSF10A6NK89 507 aa23.63■■□□□ 1.37
CHRNB1-207ENST00000575379 GRAPQ13588 217 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms