RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 CYP2E1P05181 493 aaPredicted RBP28.67■■■□□ 2.18
NPLOC4-217ENST00000574897 TFCP2Q12800 502 aa28.67■■■□□ 2.18
NPLOC4-217ENST00000574897 LMBR1LQ6UX01 489 aa28.67■■■□□ 2.18
NPLOC4-217ENST00000574897 EVI5LQ96CN4 794 aa28.67■■■□□ 2.18
NPLOC4-217ENST00000574897 ZNF330Q9Y3S2 320 aaPredicted RBP28.66■■■□□ 2.18
NPLOC4-217ENST00000574897 BAG4O95429 457 aaKnown RBP28.65■■■□□ 2.18
NPLOC4-217ENST00000574897 FOXO4P98177 505 aa28.65■■■□□ 2.18
NPLOC4-217ENST00000574897 KIAA1211Q6ZU35 1233 aa28.65■■■□□ 2.18
NPLOC4-217ENST00000574897 PIGBQ92521 554 aa28.65■■■□□ 2.18
NPLOC4-217ENST00000574897 FAM227BQ96M60 508 aa28.65■■■□□ 2.18
NPLOC4-217ENST00000574897 CHMP3Q9Y3E7 222 aa28.65■■■□□ 2.18
NPLOC4-217ENST00000574897 H7C1W4 665 aa28.65■■■□□ 2.18
NPLOC4-217ENST00000574897 EDC3Q96F86 508 aaKnown RBP28.65■■■□□ 2.18
NPLOC4-217ENST00000574897 ZDHHC9Q9Y397 364 aa28.65■■■□□ 2.18
NPLOC4-217ENST00000574897 COL15A1P39059 1388 aa28.64■■■□□ 2.18
NPLOC4-217ENST00000574897 EPB41L2O43491 1005 aaKnown RBP28.64■■■□□ 2.18
NPLOC4-217ENST00000574897 CWC22Q9HCG8 908 aaKnown RBP28.64■■■□□ 2.18
NPLOC4-217ENST00000574897 CWC25Q9NXE8 425 aaPredicted RBP28.64■■■□□ 2.17
NPLOC4-217ENST00000574897 DBNLQ9UJU6 430 aaKnown RBP28.64■■■□□ 2.17
NPLOC4-217ENST00000574897 NUCB2P80303 420 aa28.63■■■□□ 2.17
NPLOC4-217ENST00000574897 COL14A1Q05707 1796 aaKnown RBP28.62■■■□□ 2.17
NPLOC4-217ENST00000574897 NDUFB9Q9Y6M9 179 aa28.62■■■□□ 2.17
NPLOC4-217ENST00000574897 COL16A1Q07092 1604 aaPredicted RBP28.62■■■□□ 2.17
NPLOC4-217ENST00000574897 NMIQ13287 307 aaPredicted RBP28.62■■■□□ 2.17
NPLOC4-217ENST00000574897 TNNI3KQ59H18 835 aa28.62■■■□□ 2.17
NPLOC4-217ENST00000574897 DNAJC10Q8IXB1 793 aa28.62■■■□□ 2.17
NPLOC4-217ENST00000574897 FPGT-TNNI3KV9GXZ4 949 aa28.62■■■□□ 2.17
NPLOC4-217ENST00000574897 MCM2P49736 904 aa28.61■■■□□ 2.17
NPLOC4-217ENST00000574897 IL27Q8NEV9 243 aa28.61■■■□□ 2.17
NPLOC4-217ENST00000574897 RUFY2Q8WXA3 655 aa28.61■■■□□ 2.17
NPLOC4-217ENST00000574897 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.61■■■□□ 2.17
NPLOC4-217ENST00000574897 CPA1P15085 419 aa28.61■■■□□ 2.17
NPLOC4-217ENST00000574897 CLEC17AQ6ZS10 378 aa28.61■■■□□ 2.17
NPLOC4-217ENST00000574897 CHAMP1Q96JM3 812 aa28.61■■■□□ 2.17
NPLOC4-217ENST00000574897 CUL4AQ13619 759 aa28.6■■■□□ 2.17
NPLOC4-217ENST00000574897 FOXD4L5Q5VV16 416 aaPredicted RBP28.6■■■□□ 2.17
NPLOC4-217ENST00000574897 FOXD4L4Q8WXT5 416 aaPredicted RBP28.6■■■□□ 2.17
NPLOC4-217ENST00000574897 LARP6Q9BRS8 491 aaKnown RBP28.6■■■□□ 2.17
NPLOC4-217ENST00000574897 FSD1Q9BTV5 496 aa28.59■■■□□ 2.17
NPLOC4-217ENST00000574897 ATG3Q9NT62 314 aa28.59■■■□□ 2.17
NPLOC4-217ENST00000574897 CCDC9Q9Y3X0 531 aaKnown RBP28.59■■■□□ 2.17
NPLOC4-217ENST00000574897 A0A0D9SFI3 127 aa28.58■■■□□ 2.17
NPLOC4-217ENST00000574897 DBNDD2Q9BQY9 259 aa28.58■■■□□ 2.17
NPLOC4-217ENST00000574897 DISP2A7MBM2 1401 aa28.58■■■□□ 2.17
NPLOC4-217ENST00000574897 MCTP1Q6DN14 999 aa28.58■■■□□ 2.17
NPLOC4-217ENST00000574897 PRPF40BQ6NWY9 871 aaKnown RBP28.58■■■□□ 2.17
NPLOC4-217ENST00000574897 ADCK5Q3MIX3 580 aa28.57■■■□□ 2.16
NPLOC4-217ENST00000574897 CCDC191Q8NCU4 936 aa28.56■■■□□ 2.16
NPLOC4-217ENST00000574897 ZNF594Q96JF6 807 aaPredicted RBP28.56■■■□□ 2.16
NPLOC4-217ENST00000574897 TTC14Q96N46 770 aa28.56■■■□□ 2.16
NPLOC4-217ENST00000574897 CCDC171Q6TFL3 1326 aa28.56■■■□□ 2.16
NPLOC4-217ENST00000574897 CHGBP05060 677 aa28.55■■■□□ 2.16
NPLOC4-217ENST00000574897 ATG9AQ7Z3C6 839 aa28.55■■■□□ 2.16
NPLOC4-217ENST00000574897 AK2P54819 239 aa28.54■■■□□ 2.16
NPLOC4-217ENST00000574897 CASTP20810 708 aaKnown RBP28.53■■■□□ 2.16
NPLOC4-217ENST00000574897 FSD2A1L4K1 749 aa28.53■■■□□ 2.16
NPLOC4-217ENST00000574897 ATP5JP18859 108 aa28.53■■■□□ 2.16
NPLOC4-217ENST00000574897 SLC4A9Q96Q91 983 aa28.53■■■□□ 2.16
NPLOC4-217ENST00000574897 WNK3Q9BYP7 1800 aa28.53■■■□□ 2.16
NPLOC4-217ENST00000574897 COL22A1Q8NFW1 1626 aaPredicted RBP28.52■■■□□ 2.16
NPLOC4-217ENST00000574897 LRRC24Q50LG9 513 aa28.52■■■□□ 2.16
NPLOC4-217ENST00000574897 ISCA1Q9BUE6 129 aa28.52■■■□□ 2.16
NPLOC4-217ENST00000574897 RBM8AQ9Y5S9 174 aaKnown RBP28.52■■■□□ 2.16
NPLOC4-217ENST00000574897 GOLGA6L22H0YM25 854 aa28.52■■■□□ 2.16
NPLOC4-217ENST00000574897 COL9A3Q14050 684 aaPredicted RBP28.52■■■□□ 2.16
NPLOC4-217ENST00000574897 NECTIN1Q15223 517 aa28.52■■■□□ 2.16
NPLOC4-217ENST00000574897 ZNF589Q86UQ0 364 aaPredicted RBP28.52■■■□□ 2.16
NPLOC4-217ENST00000574897 SYTL4Q96C24 671 aaPredicted RBP28.52■■■□□ 2.16
NPLOC4-217ENST00000574897 AHDC1Q5TGY3 1603 aaPredicted RBP28.52■■■□□ 2.16
NPLOC4-217ENST00000574897 PLCH1Q4KWH8 1693 aa28.52■■■□□ 2.16
NPLOC4-217ENST00000574897 GOLGA6L3A6NEY3 463 aa28.51■■■□□ 2.15
NPLOC4-217ENST00000574897 RUFY3Q7L099 469 aa28.51■■■□□ 2.15
NPLOC4-217ENST00000574897 DNAJC2Q99543 621 aaKnown RBP28.51■■■□□ 2.15
NPLOC4-217ENST00000574897 JAKMIP1Q96N16 626 aaKnown RBP28.51■■■□□ 2.15
NPLOC4-217ENST00000574897 HIP1O00291 1037 aa28.5■■■□□ 2.15
NPLOC4-217ENST00000574897 TCIRG1Q13488 830 aa28.5■■■□□ 2.15
NPLOC4-217ENST00000574897 INTS4Q96HW7 963 aaKnown RBP28.5■■■□□ 2.15
NPLOC4-217ENST00000574897 PUS3Q9BZE2 481 aaKnown RBP28.5■■■□□ 2.15
NPLOC4-217ENST00000574897 BCL9O00512 1426 aa28.49■■■□□ 2.15
NPLOC4-217ENST00000574897 TIMM10P62072 90 aa28.49■■■□□ 2.15
NPLOC4-217ENST00000574897 SKOR2Q2VWA4 1001 aaPredicted RBP28.49■■■□□ 2.15
NPLOC4-217ENST00000574897 CCDC85AQ96PX6 553 aaPredicted RBP28.49■■■□□ 2.15
NPLOC4-217ENST00000574897 MED23Q9ULK4 1368 aa28.49■■■□□ 2.15
NPLOC4-217ENST00000574897 DTNBO60941 627 aa28.48■■■□□ 2.15
NPLOC4-217ENST00000574897 MAP4K1Q92918 833 aa28.48■■■□□ 2.15
NPLOC4-217ENST00000574897 NEUROD6Q96NK8 337 aa28.48■■■□□ 2.15
NPLOC4-217ENST00000574897 ADAMTS2O95450 1211 aa28.48■■■□□ 2.15
NPLOC4-217ENST00000574897 KCNJ4P48050 445 aa28.48■■■□□ 2.15
NPLOC4-217ENST00000574897 CREB3L3Q68CJ9 461 aa28.48■■■□□ 2.15
NPLOC4-217ENST00000574897 VSIG10Q8N0Z9 540 aa28.48■■■□□ 2.15
NPLOC4-217ENST00000574897 LMBRD1Q9NUN5 540 aa28.48■■■□□ 2.15
NPLOC4-217ENST00000574897 TAF6LQ9Y6J9 622 aa28.48■■■□□ 2.15
NPLOC4-217ENST00000574897 DOT1LQ8TEK3 1739 aa28.48■■■□□ 2.15
NPLOC4-217ENST00000574897 LARGE1O95461 756 aa28.47■■■□□ 2.15
NPLOC4-217ENST00000574897 XRCC6P12956 609 aaKnown RBP eCLIP28.47■■■□□ 2.152e-8■□□□□ 10.2
NPLOC4-217ENST00000574897 KCNB2Q92953 911 aa28.47■■■□□ 2.15
NPLOC4-217ENST00000574897 FAM89AQ96GI7 184 aa28.47■■■□□ 2.15
NPLOC4-217ENST00000574897 SNRKQ9NRH2 765 aa28.47■■■□□ 2.15
NPLOC4-217ENST00000574897 DDX49Q9Y6V7 483 aaKnown RBP28.47■■■□□ 2.15
NPLOC4-217ENST00000574897 EXOC5O00471 708 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms