RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 TWISTNBQ3B726 338 aaPredicted RBP21.42■■□□□ 1.02
TMEM88-202ENST00000574668 DICER1Q9UPY3 1922 aaKnown RBP21.42■■□□□ 1.02
TMEM88-202ENST00000574668 FAM177BA6PVY3 158 aa21.41■■□□□ 1.02
TMEM88-202ENST00000574668 OLFM4Q6UX06 510 aa21.41■■□□□ 1.02
TMEM88-202ENST00000574668 CLEC4GQ6UXB4 293 aa21.41■■□□□ 1.02
TMEM88-202ENST00000574668 TSPYL6Q8N831 410 aa21.41■■□□□ 1.02
TMEM88-202ENST00000574668 C7orf43Q8WVR3 580 aa21.41■■□□□ 1.02
TMEM88-202ENST00000574668 YTHDC1Q96MU7 727 aaKnown RBP21.41■■□□□ 1.02
TMEM88-202ENST00000574668 ERBB4Q15303 1308 aa21.4■■□□□ 1.02
TMEM88-202ENST00000574668 HSPA1AP0DMV8 641 aaKnown RBP21.4■■□□□ 1.02
TMEM88-202ENST00000574668 HSPA1BP0DMV9 641 aaKnown RBP21.4■■□□□ 1.02
TMEM88-202ENST00000574668 NIP7Q9Y221 180 aaKnown RBP eCLIP21.4■■□□□ 1.02
TMEM88-202ENST00000574668 ZNF652Q9Y2D9 606 aa21.4■■□□□ 1.02
TMEM88-202ENST00000574668 ARFGEF2Q9Y6D5 1785 aa21.4■■□□□ 1.02
TMEM88-202ENST00000574668 CAPN15O75808 1086 aa21.39■■□□□ 1.01
TMEM88-202ENST00000574668 HLFQ16534 295 aa21.39■■□□□ 1.01
TMEM88-202ENST00000574668 SOGA3Q5TF21 947 aa21.39■■□□□ 1.01
TMEM88-202ENST00000574668 CHADLQ6NUI6 762 aa21.39■■□□□ 1.01
TMEM88-202ENST00000574668 MYL6BP14649 208 aa21.38■■□□□ 1.01
TMEM88-202ENST00000574668 NPR1P16066 1061 aa21.38■■□□□ 1.01
TMEM88-202ENST00000574668 CCDC30Q5VVM6 783 aa21.38■■□□□ 1.01
TMEM88-202ENST00000574668 LAMB4A4D0S4 1761 aa21.38■■□□□ 1.01
TMEM88-202ENST00000574668 CCDC93Q567U6 631 aa21.37■■□□□ 1.01
TMEM88-202ENST00000574668 TPTE2Q6XPS3 522 aa21.37■■□□□ 1.01
TMEM88-202ENST00000574668 TRMT2AQ8IZ69 625 aaKnown RBP21.37■■□□□ 1.01
TMEM88-202ENST00000574668 TNS4Q8IZW8 715 aa21.37■■□□□ 1.01
TMEM88-202ENST00000574668 KLRG2A4D1S0 409 aaPredicted RBP21.36■■□□□ 1.01
TMEM88-202ENST00000574668 VAMP4O75379 141 aa21.36■■□□□ 1.01
TMEM88-202ENST00000574668 ZNF277Q9NRM2 450 aaPredicted RBP21.36■■□□□ 1.01
TMEM88-202ENST00000574668 CHPF2Q9P2E5 772 aa21.36■■□□□ 1.01
TMEM88-202ENST00000574668 DBF4Q9UBU7 674 aaPredicted RBP21.36■■□□□ 1.01
TMEM88-202ENST00000574668 MKRN1Q9UHC7 482 aaKnown RBP21.36■■□□□ 1.01
TMEM88-202ENST00000574668 ZNF541Q9H0D2 1346 aa21.35■■□□□ 1.01
TMEM88-202ENST00000574668 STK31Q9BXU1 1019 aa21.35■■□□□ 1.01
TMEM88-202ENST00000574668 DDX21Q9NR30 783 aaKnown RBP eCLIP21.35■■□□□ 1.01
TMEM88-202ENST00000574668 ANXA1P04083 346 aa21.34■■□□□ 1.01
TMEM88-202ENST00000574668 FKBP4Q02790 459 aaKnown RBP eCLIP21.34■■□□□ 1.01
TMEM88-202ENST00000574668 CREBZFQ9NS37 354 aa21.34■■□□□ 1.01
TMEM88-202ENST00000574668 TCERG1O14776 1098 aaKnown RBP21.33■■□□□ 1.01
TMEM88-202ENST00000574668 PDIA6Q15084 440 aa21.33■■□□□ 1.01
TMEM88-202ENST00000574668 TAF1DQ9H5J8 278 aaPredicted RBP21.33■■□□□ 1.01
TMEM88-202ENST00000574668 PROSER3Q2NL68 480 aa21.32■■□□□ 1
TMEM88-202ENST00000574668 L3MBTL3Q96JM7 780 aaPredicted RBP21.32■■□□□ 1
TMEM88-202ENST00000574668 HYPKQ9NX55 129 aa21.32■■□□□ 1
TMEM88-202ENST00000574668 IQCA1LA6NCM1 817 aa21.31■■□□□ 1
TMEM88-202ENST00000574668 RGL2O15211 777 aa21.31■■□□□ 1
TMEM88-202ENST00000574668 GTF2E1P29083 439 aaPredicted RBP21.31■■□□□ 1
TMEM88-202ENST00000574668 KIF6Q6ZMV9 814 aa21.31■■□□□ 1
TMEM88-202ENST00000574668 NUTM1Q86Y26 1132 aa21.31■■□□□ 1
TMEM88-202ENST00000574668 ABCC12Q96J65 1359 aa21.31■■□□□ 1
TMEM88-202ENST00000574668 CT47B1P0C2W7 299 aaPredicted RBP21.3■■□□□ 1
TMEM88-202ENST00000574668 AIMP1Q12904 312 aaKnown RBP21.3■■□□□ 1
TMEM88-202ENST00000574668 EAPPQ56P03 285 aaPredicted RBP21.3■■□□□ 1
TMEM88-202ENST00000574668 LDHDQ86WU2 507 aa21.3■■□□□ 1
TMEM88-202ENST00000574668 XAGE3Q8WTP9 111 aa21.3■■□□□ 1
TMEM88-202ENST00000574668 PASKQ96RG2 1323 aa21.29■■□□□ 1
TMEM88-202ENST00000574668 TTLL7Q6ZT98 887 aa21.29■■□□□ 1
TMEM88-202ENST00000574668 RTKN2Q8IZC4 609 aa21.29■■□□□ 1
TMEM88-202ENST00000574668 SYNE4Q8N205 404 aa21.29■■□□□ 1
TMEM88-202ENST00000574668 SLC4A2P04920 1241 aa21.28■■□□□ 1
TMEM88-202ENST00000574668 IARSP41252 1262 aaKnown RBP21.28■■□□□ 1
TMEM88-202ENST00000574668 COPS6Q7L5N1 327 aa21.28■■□□□ 1
TMEM88-202ENST00000574668 SLC51AQ86UW1 340 aa21.28■■□□□ 1
TMEM88-202ENST00000574668 ALDH1B1P30837 517 aa21.27■■□□□ 1
TMEM88-202ENST00000574668 LRP10Q7Z4F1 713 aa21.27■■□□□ 1
TMEM88-202ENST00000574668 ZNF428Q96B54 188 aa21.27■■□□□ 1
TMEM88-202ENST00000574668 HACL1Q9UJ83 578 aa21.27■■□□□ 1
TMEM88-202ENST00000574668 SNED1Q8TER0 1413 aa21.27■■□□□ 1
TMEM88-202ENST00000574668 SCN4AP35499 1836 aa21.27■□□□□ 0.99
TMEM88-202ENST00000574668 RNF123Q5XPI4 1314 aa21.27■□□□□ 0.99
TMEM88-202ENST00000574668 MAP3K15Q6ZN16 1313 aa21.27■□□□□ 0.99
TMEM88-202ENST00000574668 CNTNAP1P78357 1384 aa21.26■□□□□ 0.99
TMEM88-202ENST00000574668 ITGBL1O95965 494 aaPredicted RBP21.26■□□□□ 0.99
TMEM88-202ENST00000574668 GPTP24298 496 aa21.26■□□□□ 0.99
TMEM88-202ENST00000574668 CRY2Q49AN0 593 aa21.26■□□□□ 0.99
TMEM88-202ENST00000574668 ZBTB3Q9H5J0 574 aa21.26■□□□□ 0.99
TMEM88-202ENST00000574668 UBN2Q6ZU65 1347 aa21.26■□□□□ 0.99
TMEM88-202ENST00000574668 ERVV-1B6SEH8 477 aa21.25■□□□□ 0.99
TMEM88-202ENST00000574668 FZD9O00144 591 aa21.25■□□□□ 0.99
TMEM88-202ENST00000574668 EPHX2P34913 555 aa21.25■□□□□ 0.99
TMEM88-202ENST00000574668 NYXQ9GZU5 481 aa21.25■□□□□ 0.99
TMEM88-202ENST00000574668 PHAXQ9H814 394 aaKnown RBP21.25■□□□□ 0.99
TMEM88-202ENST00000574668 CLEC11AQ9Y240 323 aa21.25■□□□□ 0.99
TMEM88-202ENST00000574668 COL4A5P29400 1685 aa21.24■□□□□ 0.99
TMEM88-202ENST00000574668 DDX58O95786 925 aaKnown RBP21.24■□□□□ 0.99
TMEM88-202ENST00000574668 ALDH1L2Q3SY69 923 aa21.23■□□□□ 0.99
TMEM88-202ENST00000574668 SUSD4Q5VX71 490 aa21.23■□□□□ 0.99
TMEM88-202ENST00000574668 ADAMTSL1Q8N6G6 1762 aa21.23■□□□□ 0.99
TMEM88-202ENST00000574668 TMEM88BA6NKF7 163 aa21.22■□□□□ 0.99
TMEM88-202ENST00000574668 FOXN1O15353 648 aa21.22■□□□□ 0.99
TMEM88-202ENST00000574668 VEGFBP49765 207 aa21.22■□□□□ 0.99
TMEM88-202ENST00000574668 MAP1SQ66K74 1059 aaPredicted RBP21.22■□□□□ 0.99
TMEM88-202ENST00000574668 ANKRD13DQ6ZTN6 518 aa21.22■□□□□ 0.99
TMEM88-202ENST00000574668 C3orf67Q6ZVT6 689 aa21.22■□□□□ 0.99
TMEM88-202ENST00000574668 RIC3Q7Z5B4 369 aa21.22■□□□□ 0.99
TMEM88-202ENST00000574668 RPGRQ92834 1020 aaKnown RBP21.22■□□□□ 0.99
TMEM88-202ENST00000574668 PSMD1Q99460 953 aa21.22■□□□□ 0.99
TMEM88-202ENST00000574668 NUP98P52948 1817 aa21.22■□□□□ 0.99
TMEM88-202ENST00000574668 FLIIQ13045 1269 aa21.21■□□□□ 0.99
TMEM88-202ENST00000574668 G2E3Q7L622 706 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms