RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 TRMT112Q9UI30 125 aaKnown RBP16.35■□□□□ 0.21
NPLOC4-214ENST00000573876 TNNQ9UQP3 1299 aa16.35■□□□□ 0.21
NPLOC4-214ENST00000573876 UBN2Q6ZU65 1347 aa16.35■□□□□ 0.21
NPLOC4-214ENST00000573876 ARFGEF2Q9Y6D5 1785 aa16.35■□□□□ 0.21
NPLOC4-214ENST00000573876 IBTKQ9P2D0 1353 aaPredicted RBP16.35■□□□□ 0.21
NPLOC4-214ENST00000573876 FHDC1Q9C0D6 1143 aaPredicted RBP16.34■□□□□ 0.21
NPLOC4-214ENST00000573876 RNF123Q5XPI4 1314 aa16.34■□□□□ 0.21
NPLOC4-214ENST00000573876 TRIM27P14373 513 aa16.33■□□□□ 0.2
NPLOC4-214ENST00000573876 LINS1Q8NG48 757 aa16.33■□□□□ 0.2
NPLOC4-214ENST00000573876 ANKRD36CQ5JPF3 1778 aa16.33■□□□□ 0.2
NPLOC4-214ENST00000573876 NTSR2O95665 410 aa16.32■□□□□ 0.2
NPLOC4-214ENST00000573876 HSP90B1P14625 803 aaKnown RBP16.32■□□□□ 0.2
NPLOC4-214ENST00000573876 PDE6BP35913 854 aa16.32■□□□□ 0.2
NPLOC4-214ENST00000573876 AFDNP55196 1824 aaKnown RBP16.32■□□□□ 0.2
NPLOC4-214ENST00000573876 RRP1P56182 461 aaKnown RBP16.32■□□□□ 0.2
NPLOC4-214ENST00000573876 C10orf71Q711Q0 1435 aa16.32■□□□□ 0.2
NPLOC4-214ENST00000573876 NUTM1Q86Y26 1132 aa16.32■□□□□ 0.2
NPLOC4-214ENST00000573876 DZIP1LQ8IYY4 767 aaKnown RBP16.32■□□□□ 0.2
NPLOC4-214ENST00000573876 CCDC24Q8N4L8 307 aa16.32■□□□□ 0.2
NPLOC4-214ENST00000573876 SH3TC1Q8TE82 1336 aa16.32■□□□□ 0.2
NPLOC4-214ENST00000573876 BRIP1Q9BX63 1249 aa16.32■□□□□ 0.2
NPLOC4-214ENST00000573876 PDZRN3Q9UPQ7 1066 aa16.32■□□□□ 0.2
NPLOC4-214ENST00000573876 NEURL1BA8MQ27 555 aa16.31■□□□□ 0.2
NPLOC4-214ENST00000573876 IGKV5-2P06315 115 aa16.31■□□□□ 0.2
NPLOC4-214ENST00000573876 MS4A1P11836 297 aa16.31■□□□□ 0.2
NPLOC4-214ENST00000573876 TGFB2P61812 414 aa16.31■□□□□ 0.2
NPLOC4-214ENST00000573876 FTSJ3Q8IY81 847 aaKnown RBP16.31■□□□□ 0.2
NPLOC4-214ENST00000573876 SYT17Q9BSW7 474 aa16.31■□□□□ 0.2
NPLOC4-214ENST00000573876 SRCIN1Q9C0H9 1055 aa16.31■□□□□ 0.2
NPLOC4-214ENST00000573876 ALDH1L1O75891 902 aa16.3■□□□□ 0.2
NPLOC4-214ENST00000573876 CWF19L2Q2TBE0 894 aaKnown RBP16.3■□□□□ 0.2
NPLOC4-214ENST00000573876 ERFEQ4G0M1 354 aa16.3■□□□□ 0.2
NPLOC4-214ENST00000573876 BEND3Q5T5X7 828 aa16.3■□□□□ 0.2
NPLOC4-214ENST00000573876 ZBTB38Q8NAP3 1195 aaPredicted RBP16.3■□□□□ 0.2
NPLOC4-214ENST00000573876 PANK1Q8TE04 598 aa16.3■□□□□ 0.2
NPLOC4-214ENST00000573876 NRXN2Q9P2S2 1712 aa16.3■□□□□ 0.2
NPLOC4-214ENST00000573876 H0YIN7 160 aa16.29■□□□□ 0.2
NPLOC4-214ENST00000573876 PCCAP05165 728 aaPredicted RBP16.29■□□□□ 0.2
NPLOC4-214ENST00000573876 RLBP1P12271 317 aa16.29■□□□□ 0.2
NPLOC4-214ENST00000573876 CCT4P50991 539 aaKnown RBP16.29■□□□□ 0.2
NPLOC4-214ENST00000573876 C20orf194Q5TEA3 1177 aa16.29■□□□□ 0.2
NPLOC4-214ENST00000573876 FAM89AQ96GI7 184 aa16.29■□□□□ 0.2
NPLOC4-214ENST00000573876 GCKRQ14397 625 aa16.28■□□□□ 0.2
NPLOC4-214ENST00000573876 PDE3AQ14432 1141 aa16.28■□□□□ 0.2
NPLOC4-214ENST00000573876 RTL5Q5HYW3 569 aaPredicted RBP16.28■□□□□ 0.2
NPLOC4-214ENST00000573876 SLC10A5Q5PT55 438 aa16.28■□□□□ 0.2
NPLOC4-214ENST00000573876 C2CD5Q86YS7 1000 aa16.28■□□□□ 0.2
NPLOC4-214ENST00000573876 TMEM57Q8N5G2 664 aa16.28■□□□□ 0.2
NPLOC4-214ENST00000573876 NLRP3Q96P20 1036 aa16.28■□□□□ 0.2
NPLOC4-214ENST00000573876 C9orf78Q9NZ63 289 aaPredicted RBP16.28■□□□□ 0.2
NPLOC4-214ENST00000573876 IRS4O14654 1257 aaPredicted RBP16.27■□□□□ 0.2
NPLOC4-214ENST00000573876 INTS3Q68E01 1043 aaKnown RBP16.27■□□□□ 0.2
NPLOC4-214ENST00000573876 NLGN2Q8NFZ4 835 aa16.27■□□□□ 0.2
NPLOC4-214ENST00000573876 PXDNLA1KZ92 1463 aa16.27■□□□□ 0.19
NPLOC4-214ENST00000573876 ABCC12Q96J65 1359 aa16.26■□□□□ 0.19
NPLOC4-214ENST00000573876 ABCC4O15439 1325 aa16.26■□□□□ 0.19
NPLOC4-214ENST00000573876 A0A0G2JLW4 131 aa16.26■□□□□ 0.19
NPLOC4-214ENST00000573876 HCLS1P14317 486 aaPredicted RBP16.26■□□□□ 0.19
NPLOC4-214ENST00000573876 DPEP1P16444 411 aa16.26■□□□□ 0.19
NPLOC4-214ENST00000573876 COG6Q9Y2V7 657 aa16.26■□□□□ 0.19
NPLOC4-214ENST00000573876 RIC1Q4ADV7 1423 aa16.26■□□□□ 0.19
NPLOC4-214ENST00000573876 KIF13BQ9NQT8 1826 aa16.25■□□□□ 0.19
NPLOC4-214ENST00000573876 DCAF8L1A6NGE4 600 aa16.25■□□□□ 0.19
NPLOC4-214ENST00000573876 H7C1W4 665 aa16.25■□□□□ 0.19
NPLOC4-214ENST00000573876 GRM8O00222 908 aa16.25■□□□□ 0.19
NPLOC4-214ENST00000573876 CHRNA5P30532 468 aa16.25■□□□□ 0.19
NPLOC4-214ENST00000573876 UBE3BQ7Z3V4 1068 aa16.25■□□□□ 0.19
NPLOC4-214ENST00000573876 ITPRIPQ8IWB1 547 aa16.25■□□□□ 0.19
NPLOC4-214ENST00000573876 SYNE4Q8N205 404 aa16.25■□□□□ 0.19
NPLOC4-214ENST00000573876 JARID2Q92833 1246 aaPredicted RBP16.25■□□□□ 0.19
NPLOC4-214ENST00000573876 ZNF622Q969S3 477 aaKnown RBP eCLIP16.25■□□□□ 0.194e-14■□□□□ 10.9
NPLOC4-214ENST00000573876 CDHR2Q9BYE9 1310 aa16.24■□□□□ 0.19
NPLOC4-214ENST00000573876 KLRG2A4D1S0 409 aaPredicted RBP16.24■□□□□ 0.19
NPLOC4-214ENST00000573876 NPR1P16066 1061 aa16.24■□□□□ 0.19
NPLOC4-214ENST00000573876 IRX6P78412 446 aaPredicted RBP16.24■□□□□ 0.19
NPLOC4-214ENST00000573876 RPGRQ92834 1020 aaKnown RBP16.24■□□□□ 0.19
NPLOC4-214ENST00000573876 MASTLQ96GX5 879 aa16.24■□□□□ 0.19
NPLOC4-214ENST00000573876 PIM2Q9P1W9 311 aa16.24■□□□□ 0.19
NPLOC4-214ENST00000573876 PDE8AO60658 829 aa16.23■□□□□ 0.19
NPLOC4-214ENST00000573876 SRGNP10124 158 aa16.23■□□□□ 0.19
NPLOC4-214ENST00000573876 STYK1Q6J9G0 422 aa16.23■□□□□ 0.19
NPLOC4-214ENST00000573876 CNKSR1Q969H4 720 aa16.23■□□□□ 0.19
NPLOC4-214ENST00000573876 MVPQ14764 893 aaKnown RBP16.22■□□□□ 0.19
NPLOC4-214ENST00000573876 DALRD3Q5D0E6 543 aaKnown RBP16.22■□□□□ 0.19
NPLOC4-214ENST00000573876 PELP1Q8IZL8 1130 aaKnown RBP16.22■□□□□ 0.19
NPLOC4-214ENST00000573876 RBM17Q96I25 401 aaKnown RBP16.22■□□□□ 0.19
NPLOC4-214ENST00000573876 USP44Q9H0E7 712 aa16.22■□□□□ 0.19
NPLOC4-214ENST00000573876 HDAC5Q9UQL6 1122 aa16.22■□□□□ 0.19
NPLOC4-214ENST00000573876 ANKRD31Q8N7Z5 1873 aa16.22■□□□□ 0.19
NPLOC4-214ENST00000573876 ZBTB7BO15156 539 aaPredicted RBP16.21■□□□□ 0.19
NPLOC4-214ENST00000573876 ALDH1B1P30837 517 aa16.21■□□□□ 0.19
NPLOC4-214ENST00000573876 CRY2Q49AN0 593 aa16.21■□□□□ 0.19
NPLOC4-214ENST00000573876 CCDC152Q4G0S7 254 aa16.21■□□□□ 0.19
NPLOC4-214ENST00000573876 DDX46Q7L014 1031 aaKnown RBP16.21■□□□□ 0.19
NPLOC4-214ENST00000573876 TTLL6Q8N841 843 aa16.21■□□□□ 0.19
NPLOC4-214ENST00000573876 NBPF7P0C2Y1 421 aaPredicted RBP16.2■□□□□ 0.18
NPLOC4-214ENST00000573876 KCNA3P22001 575 aa16.2■□□□□ 0.18
NPLOC4-214ENST00000573876 CASP7P55210 303 aa16.2■□□□□ 0.18
NPLOC4-214ENST00000573876 SF3B3Q15393 1217 aaKnown RBP16.2■□□□□ 0.18
NPLOC4-214ENST00000573876 GPR162Q16538 588 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms