RNA–Protein interactions for RNA: ENST00000572723.1

PRPF8-206, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-206ENST00000572723 NTSR2O95665 410 aa15.31■□□□□ 0.04
PRPF8-206ENST00000572723 PROSER3Q2NL68 480 aa15.31■□□□□ 0.04
PRPF8-206ENST00000572723 HSP90AB3PQ58FF7 597 aa15.31■□□□□ 0.04
PRPF8-206ENST00000572723 COPS6Q7L5N1 327 aa15.31■□□□□ 0.04
PRPF8-206ENST00000572723 RBM17Q96I25 401 aaKnown RBP15.31■□□□□ 0.04
PRPF8-206ENST00000572723 NLRP3Q96P20 1036 aa15.31■□□□□ 0.04
PRPF8-206ENST00000572723 PSMD1Q99460 953 aa15.31■□□□□ 0.04
PRPF8-206ENST00000572723 UTP14AQ9BVJ6 771 aaKnown RBP15.31■□□□□ 0.04
PRPF8-206ENST00000572723 DDX21Q9NR30 783 aaKnown RBP eCLIP15.31■□□□□ 0.04
PRPF8-206ENST00000572723 ABCC12Q96J65 1359 aa15.31■□□□□ 0.04
PRPF8-206ENST00000572723 RIC1Q4ADV7 1423 aa15.31■□□□□ 0.04
PRPF8-206ENST00000572723 IQCA1LA6NCM1 817 aa15.3■□□□□ 0.04
PRPF8-206ENST00000572723 ANXA1P04083 346 aa15.3■□□□□ 0.04
PRPF8-206ENST00000572723 IARSP41252 1262 aaKnown RBP15.3■□□□□ 0.04
PRPF8-206ENST00000572723 JMYQ8N9B5 988 aa15.3■□□□□ 0.04
PRPF8-206ENST00000572723 L3MBTL3Q96JM7 780 aaPredicted RBP15.3■□□□□ 0.04
PRPF8-206ENST00000572723 LAS1LQ9Y4W2 734 aaKnown RBP15.3■□□□□ 0.04
PRPF8-206ENST00000572723 FZD9O00144 591 aa15.29■□□□□ 0.04
PRPF8-206ENST00000572723 IFFO2Q5TF58 517 aa15.29■□□□□ 0.04
PRPF8-206ENST00000572723 CHADLQ6NUI6 762 aa15.29■□□□□ 0.04
PRPF8-206ENST00000572723 XAGE3Q8WTP9 111 aa15.29■□□□□ 0.04
PRPF8-206ENST00000572723 NECTIN2Q92692 538 aa15.29■□□□□ 0.04
PRPF8-206ENST00000572723 RNF123Q5XPI4 1314 aa15.28■□□□□ 0.04
PRPF8-206ENST00000572723 HOXB7P09629 217 aa15.28■□□□□ 0.04
PRPF8-206ENST00000572723 AIMP1Q12904 312 aaKnown RBP15.28■□□□□ 0.04
PRPF8-206ENST00000572723 TCIRG1Q13488 830 aa15.28■□□□□ 0.04
PRPF8-206ENST00000572723 JDP2Q8WYK2 163 aa15.28■□□□□ 0.04
PRPF8-206ENST00000572723 CFAP44Q96MT7 982 aa15.28■□□□□ 0.04
PRPF8-206ENST00000572723 SCN4AP35499 1836 aa15.27■□□□□ 0.04
PRPF8-206ENST00000572723 KRT24Q2M2I5 525 aa15.27■□□□□ 0.04
PRPF8-206ENST00000572723 TMX4Q9H1E5 349 aaPredicted RBP15.27■□□□□ 0.04
PRPF8-206ENST00000572723 TAF1DQ9H5J8 278 aaPredicted RBP15.27■□□□□ 0.04
PRPF8-206ENST00000572723 C3orf67Q6ZVT6 689 aa15.26■□□□□ 0.03
PRPF8-206ENST00000572723 NLRP10Q86W26 655 aa15.26■□□□□ 0.03
PRPF8-206ENST00000572723 SNED1Q8TER0 1413 aa15.26■□□□□ 0.03
PRPF8-206ENST00000572723 PPEF1O14829 653 aaPredicted RBP15.25■□□□□ 0.03
PRPF8-206ENST00000572723 BBOX1O75936 387 aa15.25■□□□□ 0.03
PRPF8-206ENST00000572723 HDGFL1Q5TGJ6 251 aa15.25■□□□□ 0.03
PRPF8-206ENST00000572723 ANKRD13DQ6ZTN6 518 aa15.25■□□□□ 0.03
PRPF8-206ENST00000572723 LDHDQ86WU2 507 aa15.25■□□□□ 0.03
PRPF8-206ENST00000572723 GPC2Q8N158 579 aa15.25■□□□□ 0.03
PRPF8-206ENST00000572723 VPS33BQ9H267 617 aa15.25■□□□□ 0.03
PRPF8-206ENST00000572723 CHPF2Q9P2E5 772 aa15.25■□□□□ 0.03
PRPF8-206ENST00000572723 DBF4Q9UBU7 674 aaPredicted RBP15.25■□□□□ 0.03
PRPF8-206ENST00000572723 HACL1Q9UJ83 578 aa15.25■□□□□ 0.03
PRPF8-206ENST00000572723 ZNF541Q9H0D2 1346 aa15.24■□□□□ 0.03
PRPF8-206ENST00000572723 ZNF853P0CG23 659 aa15.24■□□□□ 0.03
PRPF8-206ENST00000572723 POTEIP0CG38 1075 aa15.24■□□□□ 0.03
PRPF8-206ENST00000572723 POTEJP0CG39 1038 aa15.24■□□□□ 0.03
PRPF8-206ENST00000572723 EIF6P56537 245 aaKnown RBP15.24■□□□□ 0.03
PRPF8-206ENST00000572723 CALD1Q05682 793 aaKnown RBP15.24■□□□□ 0.03
PRPF8-206ENST00000572723 PLBD2Q8NHP8 589 aa15.24■□□□□ 0.03
PRPF8-206ENST00000572723 HYPKQ9NX55 129 aa15.24■□□□□ 0.03
PRPF8-206ENST00000572723 TRMT112Q9UI30 125 aaKnown RBP15.24■□□□□ 0.03
PRPF8-206ENST00000572723 ATP6V0A2Q9Y487 856 aa15.24■□□□□ 0.03
PRPF8-206ENST00000572723 APAF1O14727 1248 aa15.23■□□□□ 0.03
PRPF8-206ENST00000572723 TCERG1O14776 1098 aaKnown RBP15.23■□□□□ 0.03
PRPF8-206ENST00000572723 EPHX2P34913 555 aa15.23■□□□□ 0.03
PRPF8-206ENST00000572723 DUSP27Q5VZP5 1158 aa15.23■□□□□ 0.03
PRPF8-206ENST00000572723 PNMA8AQ86V59 439 aaPredicted RBP15.23■□□□□ 0.03
PRPF8-206ENST00000572723 SP8Q8IXZ3 490 aa15.23■□□□□ 0.03
PRPF8-206ENST00000572723 LARGE2Q8N3Y3 721 aa15.23■□□□□ 0.03
PRPF8-206ENST00000572723 MBIPQ9NS73 344 aa15.23■□□□□ 0.03
PRPF8-206ENST00000572723 SH3TC1Q8TE82 1336 aa15.22■□□□□ 0.03
PRPF8-206ENST00000572723 HCLS1P14317 486 aaPredicted RBP15.22■□□□□ 0.03
PRPF8-206ENST00000572723 GNAI1P63096 354 aa15.22■□□□□ 0.03
PRPF8-206ENST00000572723 DDX46Q7L014 1031 aaKnown RBP15.22■□□□□ 0.03
PRPF8-206ENST00000572723 CREBZFQ9NS37 354 aa15.22■□□□□ 0.03
PRPF8-206ENST00000572723 IFT57Q9NWB7 429 aa15.22■□□□□ 0.03
PRPF8-206ENST00000572723 ABCC4O15439 1325 aa15.21■□□□□ 0.03
PRPF8-206ENST00000572723 TRIM28Q13263 835 aaKnown RBP15.21■□□□□ 0.03
PRPF8-206ENST00000572723 EAPPQ56P03 285 aaPredicted RBP15.21■□□□□ 0.03
PRPF8-206ENST00000572723 SUPT20HQ8NEM7 779 aa15.21■□□□□ 0.03
PRPF8-206ENST00000572723 ISCA1Q9BUE6 129 aa15.21■□□□□ 0.03
PRPF8-206ENST00000572723 RTFDC1Q9BY42 306 aaPredicted RBP15.21■□□□□ 0.03
PRPF8-206ENST00000572723 CHMP4AQ9BY43 222 aa15.21■□□□□ 0.03
PRPF8-206ENST00000572723 CLEC11AQ9Y240 323 aa15.21■□□□□ 0.03
PRPF8-206ENST00000572723 ANKRD36CQ5JPF3 1778 aa15.21■□□□□ 0.02
PRPF8-206ENST00000572723 ITGBL1O95965 494 aaPredicted RBP15.2■□□□□ 0.02
PRPF8-206ENST00000572723 GJA3Q9Y6H8 435 aa15.2■□□□□ 0.02
PRPF8-206ENST00000572723 PASKQ96RG2 1323 aa15.19■□□□□ 0.02
PRPF8-206ENST00000572723 PPIP5K2O43314 1243 aa15.19■□□□□ 0.02
PRPF8-206ENST00000572723 GRAPQ13588 217 aa15.19■□□□□ 0.02
PRPF8-206ENST00000572723 TMC4Q7Z404 712 aa15.19■□□□□ 0.02
PRPF8-206ENST00000572723 NIM1KQ8IY84 436 aa15.19■□□□□ 0.02
PRPF8-206ENST00000572723 MPNDQ8N594 471 aa15.19■□□□□ 0.02
PRPF8-206ENST00000572723 GRAPLQ8TC17 118 aaPredicted RBP15.19■□□□□ 0.02
PRPF8-206ENST00000572723 LMOD1P29536 600 aaPredicted RBP15.18■□□□□ 0.02
PRPF8-206ENST00000572723 SF3B3Q15393 1217 aaKnown RBP15.18■□□□□ 0.02
PRPF8-206ENST00000572723 DPP8Q6V1X1 898 aaPredicted RBP15.18■□□□□ 0.02
PRPF8-206ENST00000572723 FAM89AQ96GI7 184 aa15.18■□□□□ 0.02
PRPF8-206ENST00000572723 ATP5J2-PTCD1G3V325 749 aa15.17■□□□□ 0.02
PRPF8-206ENST00000572723 ELL2O00472 640 aaPredicted RBP15.17■□□□□ 0.02
PRPF8-206ENST00000572723 AOC3Q16853 763 aa15.17■□□□□ 0.02
PRPF8-206ENST00000572723 SLC51AQ86UW1 340 aa15.17■□□□□ 0.02
PRPF8-206ENST00000572723 CNTROBQ8N137 903 aa15.17■□□□□ 0.02
PRPF8-206ENST00000572723 ZNRF3Q9ULT6 936 aa15.17■□□□□ 0.02
PRPF8-206ENST00000572723 PCNTO95613 3336 aa15.17■□□□□ 0.02
PRPF8-206ENST00000572723 LAMB2P55268 1798 aa15.16■□□□□ 0.02
PRPF8-206ENST00000572723 TMEM88BA6NKF7 163 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms