RNA–Protein interactions for RNA: ENST00000571309.1

PSMB6-202, Transcript of proteasome subunit beta 6, humanhuman

TSL 3

Gene PSMB6, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB6-202ENST00000571309 NEUROD2Q15784 382 aa18.04■□□□□ 0.48
PSMB6-202ENST00000571309 CC2D2BQ6DHV5 1058 aa18.04■□□□□ 0.48
PSMB6-202ENST00000571309 PPP1R42Q7Z4L9 355 aa18.04■□□□□ 0.48
PSMB6-202ENST00000571309 SYNE4Q8N205 404 aa18.04■□□□□ 0.48
PSMB6-202ENST00000571309 PSMD1Q99460 953 aa18.04■□□□□ 0.48
PSMB6-202ENST00000571309 ADAMTS8Q9UP79 889 aa18.04■□□□□ 0.48
PSMB6-202ENST00000571309 SCN4AP35499 1836 aa18.04■□□□□ 0.48
PSMB6-202ENST00000571309 IQCA1LA6NCM1 817 aa18.03■□□□□ 0.48
PSMB6-202ENST00000571309 IARSP41252 1262 aaKnown RBP18.03■□□□□ 0.48
PSMB6-202ENST00000571309 CRAMP1Q96RY5 1269 aa18.03■□□□□ 0.48
PSMB6-202ENST00000571309 ZNF541Q9H0D2 1346 aa18.02■□□□□ 0.48
PSMB6-202ENST00000571309 ANKRD36CQ5JPF3 1778 aa18.02■□□□□ 0.48
PSMB6-202ENST00000571309 SLC10A5Q5PT55 438 aa18.02■□□□□ 0.48
PSMB6-202ENST00000571309 CHADLQ6NUI6 762 aa18.02■□□□□ 0.48
PSMB6-202ENST00000571309 C3orf67Q6ZVT6 689 aa18.02■□□□□ 0.48
PSMB6-202ENST00000571309 COPS6Q7L5N1 327 aa18.02■□□□□ 0.48
PSMB6-202ENST00000571309 RBM17Q96I25 401 aaKnown RBP18.02■□□□□ 0.48
PSMB6-202ENST00000571309 UTP14AQ9BVJ6 771 aaKnown RBP18.02■□□□□ 0.48
PSMB6-202ENST00000571309 FZD9O00144 591 aa18.01■□□□□ 0.47
PSMB6-202ENST00000571309 POTEIP0CG38 1075 aa18.01■□□□□ 0.47
PSMB6-202ENST00000571309 POTEJP0CG39 1038 aa18.01■□□□□ 0.47
PSMB6-202ENST00000571309 KRT24Q2M2I5 525 aa18.01■□□□□ 0.47
PSMB6-202ENST00000571309 GRIPAP1Q4V328 841 aa18.01■□□□□ 0.47
PSMB6-202ENST00000571309 XAGE3Q8WTP9 111 aa18.01■□□□□ 0.47
PSMB6-202ENST00000571309 NECTIN2Q92692 538 aa18.01■□□□□ 0.47
PSMB6-202ENST00000571309 PRKRIP1Q9H875 184 aaPredicted RBP18.01■□□□□ 0.47
PSMB6-202ENST00000571309 DDX21Q9NR30 783 aaKnown RBP eCLIP18.01■□□□□ 0.47
PSMB6-202ENST00000571309 RNF123Q5XPI4 1314 aa18■□□□□ 0.47
PSMB6-202ENST00000571309 HSP90AB3PQ58FF7 597 aa18■□□□□ 0.47
PSMB6-202ENST00000571309 NLRP3Q96P20 1036 aa18■□□□□ 0.47
PSMB6-202ENST00000571309 TAF1DQ9H5J8 278 aaPredicted RBP18■□□□□ 0.47
PSMB6-202ENST00000571309 LAS1LQ9Y4W2 734 aaKnown RBP18■□□□□ 0.47
PSMB6-202ENST00000571309 PPEF1O14829 653 aaPredicted RBP17.99■□□□□ 0.47
PSMB6-202ENST00000571309 HOXB7P09629 217 aa17.99■□□□□ 0.47
PSMB6-202ENST00000571309 AIMP1Q12904 312 aaKnown RBP17.99■□□□□ 0.47
PSMB6-202ENST00000571309 NLRP10Q86W26 655 aa17.99■□□□□ 0.47
PSMB6-202ENST00000571309 LDHDQ86WU2 507 aa17.99■□□□□ 0.47
PSMB6-202ENST00000571309 TCIRG1Q13488 830 aa17.98■□□□□ 0.47
PSMB6-202ENST00000571309 COL4A5P29400 1685 aa17.98■□□□□ 0.47
PSMB6-202ENST00000571309 SLC51AQ86UW1 340 aa17.97■□□□□ 0.47
PSMB6-202ENST00000571309 GPC2Q8N158 579 aa17.97■□□□□ 0.47
PSMB6-202ENST00000571309 JDP2Q8WYK2 163 aa17.97■□□□□ 0.47
PSMB6-202ENST00000571309 CFAP44Q96MT7 982 aa17.97■□□□□ 0.47
PSMB6-202ENST00000571309 CHPF2Q9P2E5 772 aa17.97■□□□□ 0.47
PSMB6-202ENST00000571309 HACL1Q9UJ83 578 aa17.97■□□□□ 0.47
PSMB6-202ENST00000571309 LAMB2P55268 1798 aa17.96■□□□□ 0.47
PSMB6-202ENST00000571309 HDGFL1Q5TGJ6 251 aa17.96■□□□□ 0.47
PSMB6-202ENST00000571309 ATP6V0A2Q9Y487 856 aa17.96■□□□□ 0.47
PSMB6-202ENST00000571309 ADAMTSL1Q8N6G6 1762 aa17.96■□□□□ 0.47
PSMB6-202ENST00000571309 PCNTO95613 3336 aa17.96■□□□□ 0.47
PSMB6-202ENST00000571309 EPHX2P34913 555 aa17.95■□□□□ 0.46
PSMB6-202ENST00000571309 CREBZFQ9NS37 354 aa17.95■□□□□ 0.46
PSMB6-202ENST00000571309 ABCC4O15439 1325 aa17.95■□□□□ 0.46
PSMB6-202ENST00000571309 PASKQ96RG2 1323 aa17.95■□□□□ 0.46
PSMB6-202ENST00000571309 TCERG1O14776 1098 aaKnown RBP17.94■□□□□ 0.46
PSMB6-202ENST00000571309 ZNF853P0CG23 659 aa17.94■□□□□ 0.46
PSMB6-202ENST00000571309 HCLS1P14317 486 aaPredicted RBP17.94■□□□□ 0.46
PSMB6-202ENST00000571309 EIF6P56537 245 aaKnown RBP17.94■□□□□ 0.46
PSMB6-202ENST00000571309 LARGE2Q8N3Y3 721 aa17.94■□□□□ 0.46
PSMB6-202ENST00000571309 PLBD2Q8NHP8 589 aa17.94■□□□□ 0.46
PSMB6-202ENST00000571309 MBIPQ9NS73 344 aa17.94■□□□□ 0.46
PSMB6-202ENST00000571309 DBF4Q9UBU7 674 aaPredicted RBP17.94■□□□□ 0.46
PSMB6-202ENST00000571309 TRMT112Q9UI30 125 aaKnown RBP17.94■□□□□ 0.46
PSMB6-202ENST00000571309 SH3TC1Q8TE82 1336 aa17.94■□□□□ 0.46
PSMB6-202ENST00000571309 BBOX1O75936 387 aa17.93■□□□□ 0.46
PSMB6-202ENST00000571309 EAPPQ56P03 285 aaPredicted RBP17.93■□□□□ 0.46
PSMB6-202ENST00000571309 DUSP27Q5VZP5 1158 aa17.93■□□□□ 0.46
PSMB6-202ENST00000571309 PNMA8AQ86V59 439 aaPredicted RBP17.93■□□□□ 0.46
PSMB6-202ENST00000571309 TMX4Q9H1E5 349 aaPredicted RBP17.93■□□□□ 0.46
PSMB6-202ENST00000571309 VPS33BQ9H267 617 aa17.93■□□□□ 0.46
PSMB6-202ENST00000571309 APAF1O14727 1248 aa17.92■□□□□ 0.46
PSMB6-202ENST00000571309 ITGBL1O95965 494 aaPredicted RBP17.92■□□□□ 0.46
PSMB6-202ENST00000571309 ANKRD13DQ6ZTN6 518 aa17.92■□□□□ 0.46
PSMB6-202ENST00000571309 ISCA1Q9BUE6 129 aa17.92■□□□□ 0.46
PSMB6-202ENST00000571309 RTFDC1Q9BY42 306 aaPredicted RBP17.92■□□□□ 0.46
PSMB6-202ENST00000571309 HYPKQ9NX55 129 aa17.92■□□□□ 0.46
PSMB6-202ENST00000571309 SP8Q8IXZ3 490 aa17.91■□□□□ 0.46
PSMB6-202ENST00000571309 IFT57Q9NWB7 429 aa17.91■□□□□ 0.46
PSMB6-202ENST00000571309 GJA3Q9Y6H8 435 aa17.91■□□□□ 0.46
PSMB6-202ENST00000571309 LTBP1Q14766 1721 aa17.91■□□□□ 0.46
PSMB6-202ENST00000571309 DDX60Q8IY21 1712 aaKnown RBP17.9■□□□□ 0.46
PSMB6-202ENST00000571309 PPIP5K2O43314 1243 aa17.9■□□□□ 0.46
PSMB6-202ENST00000571309 CALD1Q05682 793 aaKnown RBP17.9■□□□□ 0.46
PSMB6-202ENST00000571309 DDX46Q7L014 1031 aaKnown RBP17.9■□□□□ 0.46
PSMB6-202ENST00000571309 NIM1KQ8IY84 436 aa17.9■□□□□ 0.46
PSMB6-202ENST00000571309 SUPT20HQ8NEM7 779 aa17.9■□□□□ 0.46
PSMB6-202ENST00000571309 CLEC11AQ9Y240 323 aa17.9■□□□□ 0.46
PSMB6-202ENST00000571309 SCNN1DP51172 638 aa17.89■□□□□ 0.45
PSMB6-202ENST00000571309 GNAI1P63096 354 aa17.89■□□□□ 0.45
PSMB6-202ENST00000571309 GRAPQ13588 217 aa17.89■□□□□ 0.45
PSMB6-202ENST00000571309 AOC3Q16853 763 aa17.89■□□□□ 0.45
PSMB6-202ENST00000571309 GRAPLQ8TC17 118 aaPredicted RBP17.89■□□□□ 0.45
PSMB6-202ENST00000571309 LMOD1P29536 600 aaPredicted RBP17.88■□□□□ 0.45
PSMB6-202ENST00000571309 TRIM28Q13263 835 aaKnown RBP17.88■□□□□ 0.45
PSMB6-202ENST00000571309 DPP8Q6V1X1 898 aaPredicted RBP17.88■□□□□ 0.45
PSMB6-202ENST00000571309 CNTROBQ8N137 903 aa17.88■□□□□ 0.45
PSMB6-202ENST00000571309 MKRN1Q9UHC7 482 aaKnown RBP17.88■□□□□ 0.45
PSMB6-202ENST00000571309 TAF1P21675 1872 aa17.88■□□□□ 0.45
PSMB6-202ENST00000571309 TMEM88BA6NKF7 163 aa17.87■□□□□ 0.45
PSMB6-202ENST00000571309 ATP5J2-PTCD1G3V325 749 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms