RNA–Protein interactions for RNA: ENST00000570513.5

CALCOCO2-225, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-225ENST00000570513 AAMPQ13685 434 aa14.49□□□□□ -0.09
CALCOCO2-225ENST00000570513 GCKRQ14397 625 aa14.49□□□□□ -0.09
CALCOCO2-225ENST00000570513 TRAPPC3LQ5T215 181 aa14.49□□□□□ -0.09
CALCOCO2-225ENST00000570513 USPL1Q5W0Q7 1092 aa14.49□□□□□ -0.09
CALCOCO2-225ENST00000570513 UPF1Q92900 1129 aaKnown RBP eCLIP14.49□□□□□ -0.09
CALCOCO2-225ENST00000570513 USP44Q9H0E7 712 aa14.49□□□□□ -0.09
CALCOCO2-225ENST00000570513 BCL2L12Q9HB09 334 aa14.49□□□□□ -0.09
CALCOCO2-225ENST00000570513 CWC25Q9NXE8 425 aaPredicted RBP14.49□□□□□ -0.09
CALCOCO2-225ENST00000570513 RGL2O15211 777 aa14.48□□□□□ -0.09
CALCOCO2-225ENST00000570513 ZPR1O75312 459 aa14.48□□□□□ -0.09
CALCOCO2-225ENST00000570513 GNAI3P08754 354 aa14.48□□□□□ -0.09
CALCOCO2-225ENST00000570513 NBPF7P0C2Y1 421 aaPredicted RBP14.48□□□□□ -0.09
CALCOCO2-225ENST00000570513 UBTFL1P0CB47 393 aaPredicted RBP14.48□□□□□ -0.09
CALCOCO2-225ENST00000570513 CCDC191Q8NCU4 936 aa14.48□□□□□ -0.09
CALCOCO2-225ENST00000570513 PPP4R2Q9NY27 417 aa14.48□□□□□ -0.09
CALCOCO2-225ENST00000570513 STK32BQ9NY57 414 aa14.48□□□□□ -0.09
CALCOCO2-225ENST00000570513 C9orf78Q9NZ63 289 aaPredicted RBP14.48□□□□□ -0.09
CALCOCO2-225ENST00000570513 QSER1Q2KHR3 1735 aa14.48□□□□□ -0.09
CALCOCO2-225ENST00000570513 PNPLA7Q6ZV29 1317 aa14.47□□□□□ -0.09
CALCOCO2-225ENST00000570513 UBE3BQ7Z3V4 1068 aa14.47□□□□□ -0.09
CALCOCO2-225ENST00000570513 NLRP10Q86W26 655 aa14.47□□□□□ -0.09
CALCOCO2-225ENST00000570513 ZNF34Q8IZ26 560 aa14.47□□□□□ -0.09
CALCOCO2-225ENST00000570513 PCDHB15Q9Y5E8 787 aa14.47□□□□□ -0.09
CALCOCO2-225ENST00000570513 LRRFIP2Q9Y608 721 aaKnown RBP14.47□□□□□ -0.09
CALCOCO2-225ENST00000570513 UTYO14607 1347 aa14.46□□□□□ -0.09
CALCOCO2-225ENST00000570513 GNAI2P04899 355 aa14.46□□□□□ -0.09
CALCOCO2-225ENST00000570513 TRIM28Q13263 835 aaKnown RBP14.46□□□□□ -0.09
CALCOCO2-225ENST00000570513 SLC15A2Q16348 729 aa14.46□□□□□ -0.09
CALCOCO2-225ENST00000570513 B4GALNT3Q6L9W6 998 aa14.46□□□□□ -0.09
CALCOCO2-225ENST00000570513 CLEC4GQ6UXB4 293 aa14.46□□□□□ -0.09
CALCOCO2-225ENST00000570513 ILDR2Q71H61 639 aa14.46□□□□□ -0.09
CALCOCO2-225ENST00000570513 COL23A1Q86Y22 540 aaPredicted RBP14.46□□□□□ -0.09
CALCOCO2-225ENST00000570513 JARID2Q92833 1246 aaPredicted RBP14.46□□□□□ -0.09
CALCOCO2-225ENST00000570513 FOXD4L1Q9NU39 408 aa14.46□□□□□ -0.09
CALCOCO2-225ENST00000570513 NIP7Q9Y221 180 aaKnown RBP eCLIP14.46□□□□□ -0.09
CALCOCO2-225ENST00000570513 TBC1D9BQ66K14 1250 aa14.45□□□□□ -0.1
CALCOCO2-225ENST00000570513 CCDC136Q96JN2 1154 aa14.45□□□□□ -0.1
CALCOCO2-225ENST00000570513 GYS1P13807 737 aa14.44□□□□□ -0.1
CALCOCO2-225ENST00000570513 CASP7P55210 303 aa14.44□□□□□ -0.1
CALCOCO2-225ENST00000570513 PARP10Q53GL7 1025 aa14.44□□□□□ -0.1
CALCOCO2-225ENST00000570513 CEP85Q6P2H3 762 aa14.44□□□□□ -0.1
CALCOCO2-225ENST00000570513 BICDL1Q6ZP65 573 aa14.44□□□□□ -0.1
CALCOCO2-225ENST00000570513 FLAD1Q8NFF5 587 aa14.44□□□□□ -0.1
CALCOCO2-225ENST00000570513 SUCLG2Q96I99 432 aa14.44□□□□□ -0.1
CALCOCO2-225ENST00000570513 LAMB2P55268 1798 aa14.43□□□□□ -0.1
CALCOCO2-225ENST00000570513 FAM177BA6PVY3 158 aa14.43□□□□□ -0.1
CALCOCO2-225ENST00000570513 H7C1W4 665 aa14.43□□□□□ -0.1
CALCOCO2-225ENST00000570513 RTL5Q5HYW3 569 aaPredicted RBP14.43□□□□□ -0.1
CALCOCO2-225ENST00000570513 SUSD4Q5VX71 490 aa14.43□□□□□ -0.1
CALCOCO2-225ENST00000570513 NTSR2O95665 410 aa14.42□□□□□ -0.1
CALCOCO2-225ENST00000570513 PCCAP05165 728 aaPredicted RBP14.42□□□□□ -0.1
CALCOCO2-225ENST00000570513 ZBTB38Q8NAP3 1195 aaPredicted RBP14.42□□□□□ -0.1
CALCOCO2-225ENST00000570513 TRMT112Q9UI30 125 aaKnown RBP14.42□□□□□ -0.1
CALCOCO2-225ENST00000570513 CARMIL3Q8ND23 1372 aa14.42□□□□□ -0.1
CALCOCO2-225ENST00000570513 CDHR2Q9BYE9 1310 aa14.41□□□□□ -0.1
CALCOCO2-225ENST00000570513 NFIXQ14938 502 aa14.41□□□□□ -0.1
CALCOCO2-225ENST00000570513 EPHA10Q5JZY3 1008 aa14.41□□□□□ -0.1
CALCOCO2-225ENST00000570513 SIRT2Q8IXJ6 389 aa14.41□□□□□ -0.1
CALCOCO2-225ENST00000570513 ANKRD44Q8N8A2 993 aa14.41□□□□□ -0.1
CALCOCO2-225ENST00000570513 FAM89AQ96GI7 184 aa14.41□□□□□ -0.1
CALCOCO2-225ENST00000570513 KAZALD1Q96I82 304 aa14.41□□□□□ -0.1
CALCOCO2-225ENST00000570513 UTP14AQ9BVJ6 771 aaKnown RBP14.41□□□□□ -0.1
CALCOCO2-225ENST00000570513 BICC1Q9H694 974 aaKnown RBP14.41□□□□□ -0.1
CALCOCO2-225ENST00000570513 ABCC12Q96J65 1359 aa14.41□□□□□ -0.1
CALCOCO2-225ENST00000570513 MSL1Q68DK7 614 aa14.4□□□□□ -0.1
CALCOCO2-225ENST00000570513 PPP1R42Q7Z4L9 355 aa14.4□□□□□ -0.1
CALCOCO2-225ENST00000570513 SYNE4Q8N205 404 aa14.4□□□□□ -0.1
CALCOCO2-225ENST00000570513 SETDB2Q96T68 719 aa14.4□□□□□ -0.1
CALCOCO2-225ENST00000570513 HDAC5Q9UQL6 1122 aa14.4□□□□□ -0.1
CALCOCO2-225ENST00000570513 DDX60Q8IY21 1712 aaKnown RBP14.4□□□□□ -0.1
CALCOCO2-225ENST00000570513 KDM2BQ8NHM5 1336 aa14.4□□□□□ -0.1
CALCOCO2-225ENST00000570513 SH3TC1Q8TE82 1336 aa14.4□□□□□ -0.1
CALCOCO2-225ENST00000570513 PNMA6EA0A0J9YXQ4 647 aa14.39□□□□□ -0.11
CALCOCO2-225ENST00000570513 IRS4O14654 1257 aaPredicted RBP14.39□□□□□ -0.11
CALCOCO2-225ENST00000570513 IGHDP01880 384 aa14.39□□□□□ -0.11
CALCOCO2-225ENST00000570513 DDR1Q08345 913 aa14.39□□□□□ -0.11
CALCOCO2-225ENST00000570513 HDAC1Q13547 482 aaPredicted RBP14.39□□□□□ -0.11
CALCOCO2-225ENST00000570513 NBPF5PQ86XG9 351 aaPredicted RBP14.39□□□□□ -0.11
CALCOCO2-225ENST00000570513 NUTM1Q86Y26 1132 aa14.39□□□□□ -0.11
CALCOCO2-225ENST00000570513 RPAP2Q8IXW5 612 aaPredicted RBP14.39□□□□□ -0.11
CALCOCO2-225ENST00000570513 CASZ1Q86V15 1759 aa14.39□□□□□ -0.11
CALCOCO2-225ENST00000570513 TNRC6CQ9HCJ0 1690 aaKnown RBP14.39□□□□□ -0.11
CALCOCO2-225ENST00000570513 MTX1Q13505 466 aa14.38□□□□□ -0.11
CALCOCO2-225ENST00000570513 RABL6Q3YEC7 729 aaPredicted RBP14.38□□□□□ -0.11
CALCOCO2-225ENST00000570513 SRGAP3O43295 1099 aa14.37□□□□□ -0.11
CALCOCO2-225ENST00000570513 HMMRO75330 724 aa14.37□□□□□ -0.11
CALCOCO2-225ENST00000570513 FOXO4P98177 505 aa14.37□□□□□ -0.11
CALCOCO2-225ENST00000570513 ERFEQ4G0M1 354 aa14.37□□□□□ -0.11
CALCOCO2-225ENST00000570513 PLA2G12BQ9BX93 195 aa14.37□□□□□ -0.11
CALCOCO2-225ENST00000570513 PDGFDQ9GZP0 370 aaPredicted RBP14.37□□□□□ -0.11
CALCOCO2-225ENST00000570513 NYXQ9GZU5 481 aa14.37□□□□□ -0.11
CALCOCO2-225ENST00000570513 RWDD1Q9H446 243 aaPredicted RBP14.37□□□□□ -0.11
CALCOCO2-225ENST00000570513 POLRMTO00411 1230 aaKnown RBP14.36□□□□□ -0.11
CALCOCO2-225ENST00000570513 HCLS1P14317 486 aaPredicted RBP14.36□□□□□ -0.11
CALCOCO2-225ENST00000570513 TM4SF1P30408 202 aa14.36□□□□□ -0.11
CALCOCO2-225ENST00000570513 CTSWP56202 376 aa14.36□□□□□ -0.11
CALCOCO2-225ENST00000570513 ATP8B2P98198 1209 aa14.36□□□□□ -0.11
CALCOCO2-225ENST00000570513 LMBR1LQ6UX01 489 aa14.36□□□□□ -0.11
CALCOCO2-225ENST00000570513 CENPQQ7L2Z9 268 aaPredicted RBP14.36□□□□□ -0.11
CALCOCO2-225ENST00000570513 NLGN1Q8N2Q7 840 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms