RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 PPP1R42Q7Z4L9 355 aa16.23■□□□□ 0.19
SCAMP2-212ENST00000569904 ADAMTS8Q9UP79 889 aa16.23■□□□□ 0.19
SCAMP2-212ENST00000569904 HOXB7P09629 217 aa16.22■□□□□ 0.19
SCAMP2-212ENST00000569904 EIF2S2P20042 333 aaKnown RBP16.22■□□□□ 0.19
SCAMP2-212ENST00000569904 GPTP24298 496 aa16.22■□□□□ 0.19
SCAMP2-212ENST00000569904 WDR43Q15061 677 aaKnown RBP eCLIP16.22■□□□□ 0.19
SCAMP2-212ENST00000569904 SLC10A5Q5PT55 438 aa16.22■□□□□ 0.19
SCAMP2-212ENST00000569904 OLFM4Q6UX06 510 aa16.22■□□□□ 0.19
SCAMP2-212ENST00000569904 CCDC146Q8IYE0 955 aa16.22■□□□□ 0.19
SCAMP2-212ENST00000569904 CRAMP1Q96RY5 1269 aa16.22■□□□□ 0.19
SCAMP2-212ENST00000569904 DDX60Q8IY21 1712 aaKnown RBP16.22■□□□□ 0.19
SCAMP2-212ENST00000569904 FZD9O00144 591 aa16.21■□□□□ 0.19
SCAMP2-212ENST00000569904 HTRA3P83110 453 aa16.21■□□□□ 0.19
SCAMP2-212ENST00000569904 DDX21Q9NR30 783 aaKnown RBP eCLIP16.21■□□□□ 0.19
SCAMP2-212ENST00000569904 COL4A5P29400 1685 aa16.21■□□□□ 0.18
SCAMP2-212ENST00000569904 IQCA1LA6NCM1 817 aa16.2■□□□□ 0.18
SCAMP2-212ENST00000569904 IARSP41252 1262 aaKnown RBP16.2■□□□□ 0.18
SCAMP2-212ENST00000569904 HSP90AB3PQ58FF7 597 aa16.2■□□□□ 0.18
SCAMP2-212ENST00000569904 ZNF277Q9NRM2 450 aaPredicted RBP16.2■□□□□ 0.18
SCAMP2-212ENST00000569904 ANXA1P04083 346 aa16.19■□□□□ 0.18
SCAMP2-212ENST00000569904 NEUROD2Q15784 382 aa16.19■□□□□ 0.18
SCAMP2-212ENST00000569904 IFFO2Q5TF58 517 aa16.19■□□□□ 0.18
SCAMP2-212ENST00000569904 COPS6Q7L5N1 327 aa16.19■□□□□ 0.18
SCAMP2-212ENST00000569904 SYNE4Q8N205 404 aa16.19■□□□□ 0.18
SCAMP2-212ENST00000569904 RPGRQ92834 1020 aaKnown RBP16.19■□□□□ 0.18
SCAMP2-212ENST00000569904 CFAP44Q96MT7 982 aa16.19■□□□□ 0.18
SCAMP2-212ENST00000569904 LRRC37AA6NMS7 1700 aa16.19■□□□□ 0.18
SCAMP2-212ENST00000569904 ZNF541Q9H0D2 1346 aa16.19■□□□□ 0.18
SCAMP2-212ENST00000569904 ZNF853P0CG23 659 aa16.18■□□□□ 0.18
SCAMP2-212ENST00000569904 KRT24Q2M2I5 525 aa16.18■□□□□ 0.18
SCAMP2-212ENST00000569904 CHADLQ6NUI6 762 aa16.18■□□□□ 0.18
SCAMP2-212ENST00000569904 C3orf67Q6ZVT6 689 aa16.18■□□□□ 0.18
SCAMP2-212ENST00000569904 RBM17Q96I25 401 aaKnown RBP16.18■□□□□ 0.18
SCAMP2-212ENST00000569904 NLRP3Q96P20 1036 aa16.18■□□□□ 0.18
SCAMP2-212ENST00000569904 UTP14AQ9BVJ6 771 aaKnown RBP16.18■□□□□ 0.18
SCAMP2-212ENST00000569904 TAF1DQ9H5J8 278 aaPredicted RBP16.18■□□□□ 0.18
SCAMP2-212ENST00000569904 LTBP1Q14766 1721 aa16.17■□□□□ 0.18
SCAMP2-212ENST00000569904 TCIRG1Q13488 830 aa16.17■□□□□ 0.18
SCAMP2-212ENST00000569904 NLRP10Q86W26 655 aa16.17■□□□□ 0.18
SCAMP2-212ENST00000569904 XAGE3Q8WTP9 111 aa16.17■□□□□ 0.18
SCAMP2-212ENST00000569904 PPEF1O14829 653 aaPredicted RBP16.16■□□□□ 0.18
SCAMP2-212ENST00000569904 POTEIP0CG38 1075 aa16.16■□□□□ 0.18
SCAMP2-212ENST00000569904 POTEJP0CG39 1038 aa16.16■□□□□ 0.18
SCAMP2-212ENST00000569904 LDHDQ86WU2 507 aa16.16■□□□□ 0.18
SCAMP2-212ENST00000569904 GPC2Q8N158 579 aa16.16■□□□□ 0.18
SCAMP2-212ENST00000569904 VPS33BQ9H267 617 aa16.16■□□□□ 0.18
SCAMP2-212ENST00000569904 CHPF2Q9P2E5 772 aa16.16■□□□□ 0.18
SCAMP2-212ENST00000569904 TAF1P21675 1872 aa16.16■□□□□ 0.18
SCAMP2-212ENST00000569904 PLBD2Q8NHP8 589 aa16.15■□□□□ 0.18
SCAMP2-212ENST00000569904 DBF4Q9UBU7 674 aaPredicted RBP16.15■□□□□ 0.18
SCAMP2-212ENST00000569904 ABCC4O15439 1325 aa16.15■□□□□ 0.18
SCAMP2-212ENST00000569904 PASKQ96RG2 1323 aa16.15■□□□□ 0.18
SCAMP2-212ENST00000569904 AIMP1Q12904 312 aaKnown RBP16.14■□□□□ 0.17
SCAMP2-212ENST00000569904 HDGFL1Q5TGJ6 251 aa16.14■□□□□ 0.17
SCAMP2-212ENST00000569904 NECTIN2Q92692 538 aa16.14■□□□□ 0.17
SCAMP2-212ENST00000569904 CREBZFQ9NS37 354 aa16.14■□□□□ 0.17
SCAMP2-212ENST00000569904 MBIPQ9NS73 344 aa16.14■□□□□ 0.17
SCAMP2-212ENST00000569904 ATP6V0A2Q9Y487 856 aa16.14■□□□□ 0.17
SCAMP2-212ENST00000569904 LAS1LQ9Y4W2 734 aaKnown RBP16.14■□□□□ 0.17
SCAMP2-212ENST00000569904 JDP2Q8WYK2 163 aa16.13■□□□□ 0.17
SCAMP2-212ENST00000569904 ISCA1Q9BUE6 129 aa16.13■□□□□ 0.17
SCAMP2-212ENST00000569904 RTFDC1Q9BY42 306 aaPredicted RBP16.13■□□□□ 0.17
SCAMP2-212ENST00000569904 IFT57Q9NWB7 429 aa16.13■□□□□ 0.17
SCAMP2-212ENST00000569904 HACL1Q9UJ83 578 aa16.13■□□□□ 0.17
SCAMP2-212ENST00000569904 SH3TC1Q8TE82 1336 aa16.13■□□□□ 0.17
SCAMP2-212ENST00000569904 BBOX1O75936 387 aa16.12■□□□□ 0.17
SCAMP2-212ENST00000569904 DUSP27Q5VZP5 1158 aa16.12■□□□□ 0.17
SCAMP2-212ENST00000569904 ANKRD13DQ6ZTN6 518 aa16.12■□□□□ 0.17
SCAMP2-212ENST00000569904 SLC51AQ86UW1 340 aa16.12■□□□□ 0.17
SCAMP2-212ENST00000569904 HYPKQ9NX55 129 aa16.12■□□□□ 0.17
SCAMP2-212ENST00000569904 DUOX1Q9NRD9 1551 aa16.12■□□□□ 0.17
SCAMP2-212ENST00000569904 APAF1O14727 1248 aa16.11■□□□□ 0.17
SCAMP2-212ENST00000569904 ITGBL1O95965 494 aaPredicted RBP16.11■□□□□ 0.17
SCAMP2-212ENST00000569904 EPHX2P34913 555 aa16.11■□□□□ 0.17
SCAMP2-212ENST00000569904 CALD1Q05682 793 aaKnown RBP16.11■□□□□ 0.17
SCAMP2-212ENST00000569904 TRIM28Q13263 835 aaKnown RBP16.11■□□□□ 0.17
SCAMP2-212ENST00000569904 PNMA8AQ86V59 439 aaPredicted RBP16.11■□□□□ 0.17
SCAMP2-212ENST00000569904 SP8Q8IXZ3 490 aa16.11■□□□□ 0.17
SCAMP2-212ENST00000569904 TRMT112Q9UI30 125 aaKnown RBP16.11■□□□□ 0.17
SCAMP2-212ENST00000569904 EIF6P56537 245 aaKnown RBP16.1■□□□□ 0.17
SCAMP2-212ENST00000569904 GNAI1P63096 354 aa16.1■□□□□ 0.17
SCAMP2-212ENST00000569904 HCLS1P14317 486 aaPredicted RBP16.09■□□□□ 0.17
SCAMP2-212ENST00000569904 GRAPQ13588 217 aa16.09■□□□□ 0.17
SCAMP2-212ENST00000569904 TMC4Q7Z404 712 aa16.09■□□□□ 0.17
SCAMP2-212ENST00000569904 LARGE2Q8N3Y3 721 aa16.09■□□□□ 0.17
SCAMP2-212ENST00000569904 SUPT20HQ8NEM7 779 aa16.09■□□□□ 0.17
SCAMP2-212ENST00000569904 GRAPLQ8TC17 118 aaPredicted RBP16.09■□□□□ 0.17
SCAMP2-212ENST00000569904 COL4A1P02462 1669 aa16.08■□□□□ 0.17
SCAMP2-212ENST00000569904 TRPM7Q96QT4 1865 aa16.08■□□□□ 0.17
SCAMP2-212ENST00000569904 SCNN1DP51172 638 aa16.08■□□□□ 0.16
SCAMP2-212ENST00000569904 SF3B3Q15393 1217 aaKnown RBP16.08■□□□□ 0.16
SCAMP2-212ENST00000569904 DDX46Q7L014 1031 aaKnown RBP16.08■□□□□ 0.16
SCAMP2-212ENST00000569904 TMX4Q9H1E5 349 aaPredicted RBP16.08■□□□□ 0.16
SCAMP2-212ENST00000569904 PPIP5K2O43314 1243 aa16.07■□□□□ 0.16
SCAMP2-212ENST00000569904 NIM1KQ8IY84 436 aa16.07■□□□□ 0.16
SCAMP2-212ENST00000569904 CNTNAP1P78357 1384 aa16.07■□□□□ 0.16
SCAMP2-212ENST00000569904 TCERG1O14776 1098 aaKnown RBP16.06■□□□□ 0.16
SCAMP2-212ENST00000569904 KIAA2012Q0VF49 1180 aa16.06■□□□□ 0.16
SCAMP2-212ENST00000569904 AOC3Q16853 763 aa16.06■□□□□ 0.16
SCAMP2-212ENST00000569904 CCDC27Q2M243 656 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 174.2 ms