RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-222ENST00000569820 MYRIPQ8NFW9 859 aa14.46□□□□□ -0.1
SPG7-222ENST00000569820 CWC22Q9HCG8 908 aaKnown RBP14.46□□□□□ -0.1
SPG7-222ENST00000569820 EXOC6BQ9Y2D4 811 aa14.46□□□□□ -0.1
SPG7-222ENST00000569820 DDX58O95786 925 aaKnown RBP14.45□□□□□ -0.1
SPG7-222ENST00000569820 PTMAP06454 111 aaKnown RBP14.45□□□□□ -0.1
SPG7-222ENST00000569820 MYL6BP14649 208 aa14.45□□□□□ -0.1
SPG7-222ENST00000569820 SSH3Q8TE77 659 aa14.45□□□□□ -0.1
SPG7-222ENST00000569820 LRP6O75581 1613 aa14.45□□□□□ -0.1
SPG7-222ENST00000569820 NUP188Q5SRE5 1749 aa14.45□□□□□ -0.1
SPG7-222ENST00000569820 AIMP1Q12904 312 aaKnown RBP14.44□□□□□ -0.1
SPG7-222ENST00000569820 ZFP91Q96JP5 570 aaPredicted RBP14.44□□□□□ -0.1
SPG7-222ENST00000569820 TMEM63CQ9P1W3 806 aa14.44□□□□□ -0.1
SPG7-222ENST00000569820 POLA2Q14181 598 aa14.44□□□□□ -0.1
SPG7-222ENST00000569820 CWF19L2Q2TBE0 894 aaKnown RBP14.44□□□□□ -0.1
SPG7-222ENST00000569820 DNTTIP2Q5QJE6 756 aaKnown RBP14.44□□□□□ -0.1
SPG7-222ENST00000569820 TTC22Q5TAA0 569 aa14.44□□□□□ -0.1
SPG7-222ENST00000569820 LINS1Q8NG48 757 aa14.44□□□□□ -0.1
SPG7-222ENST00000569820 XAGE3Q8WTP9 111 aa14.43□□□□□ -0.1
SPG7-222ENST00000569820 NWD2Q9ULI1 1742 aa14.43□□□□□ -0.1
SPG7-222ENST00000569820 PIP4K2AP48426 406 aaPredicted RBP14.43□□□□□ -0.1
SPG7-222ENST00000569820 PPP1R42Q7Z4L9 355 aa14.43□□□□□ -0.1
SPG7-222ENST00000569820 PLCD3Q8N3E9 789 aa14.43□□□□□ -0.1
SPG7-222ENST00000569820 COPS6Q7L5N1 327 aa14.42□□□□□ -0.1
SPG7-222ENST00000569820 RNF214Q8ND24 703 aa14.42□□□□□ -0.1
SPG7-222ENST00000569820 UTYO14607 1347 aa14.42□□□□□ -0.1
SPG7-222ENST00000569820 SALL3Q9BXA9 1300 aa14.42□□□□□ -0.1
SPG7-222ENST00000569820 VGLL3A8MV65 326 aa14.42□□□□□ -0.1
SPG7-222ENST00000569820 IGKV5-2P06315 115 aa14.42□□□□□ -0.1
SPG7-222ENST00000569820 PRIMPOLQ96LW4 560 aa14.42□□□□□ -0.1
SPG7-222ENST00000569820 LRRCC1Q9C099 1032 aa14.42□□□□□ -0.1
SPG7-222ENST00000569820 HMGN5P82970 282 aaKnown RBP14.41□□□□□ -0.1
SPG7-222ENST00000569820 MTX1Q13505 466 aa14.41□□□□□ -0.1
SPG7-222ENST00000569820 RIC3Q7Z5B4 369 aa14.41□□□□□ -0.1
SPG7-222ENST00000569820 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.41□□□□□ -0.1
SPG7-222ENST00000569820 DOT1LQ8TEK3 1739 aa14.41□□□□□ -0.1
SPG7-222ENST00000569820 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.41□□□□□ -0.1
SPG7-222ENST00000569820 MBD3O95983 291 aa14.41□□□□□ -0.1
SPG7-222ENST00000569820 OSBPL3Q9H4L5 887 aa14.41□□□□□ -0.1
SPG7-222ENST00000569820 C9orf78Q9NZ63 289 aaPredicted RBP14.41□□□□□ -0.1
SPG7-222ENST00000569820 GRM8O00222 908 aa14.4□□□□□ -0.1
SPG7-222ENST00000569820 SRGAP3O43295 1099 aa14.4□□□□□ -0.1
SPG7-222ENST00000569820 ST18O60284 1047 aa14.4□□□□□ -0.1
SPG7-222ENST00000569820 CDK11BP21127 795 aaKnown RBP14.4□□□□□ -0.1
SPG7-222ENST00000569820 NBPF26B4DH59 902 aa14.4□□□□□ -0.11
SPG7-222ENST00000569820 NBPF14Q5TI25 921 aa14.4□□□□□ -0.11
SPG7-222ENST00000569820 NBPF10Q6P3W6 841 aaKnown RBP14.4□□□□□ -0.11
SPG7-222ENST00000569820 ZGPATQ8N5A5 531 aaKnown RBP14.4□□□□□ -0.11
SPG7-222ENST00000569820 NBPF15Q8N660 670 aa14.4□□□□□ -0.11
SPG7-222ENST00000569820 METTL22Q9BUU2 404 aaPredicted RBP14.4□□□□□ -0.11
SPG7-222ENST00000569820 TMOD3Q9NYL9 352 aa14.4□□□□□ -0.11
SPG7-222ENST00000569820 NEURL1BA8MQ27 555 aa14.39□□□□□ -0.11
SPG7-222ENST00000569820 ADAMTS2O95450 1211 aa14.39□□□□□ -0.11
SPG7-222ENST00000569820 PDE1AP54750 535 aa14.39□□□□□ -0.11
SPG7-222ENST00000569820 ANKRD13DQ6ZTN6 518 aa14.39□□□□□ -0.11
SPG7-222ENST00000569820 ZNF710Q8N1W2 664 aa14.39□□□□□ -0.11
SPG7-222ENST00000569820 NSFL1CQ9UNZ2 370 aaKnown RBP14.39□□□□□ -0.11
SPG7-222ENST00000569820 ZDHHC9Q9Y397 364 aa14.39□□□□□ -0.11
SPG7-222ENST00000569820 TJP1Q07157 1748 aa14.39□□□□□ -0.11
SPG7-222ENST00000569820 TOM1O60784 492 aa14.38□□□□□ -0.11
SPG7-222ENST00000569820 PTCD1O75127 700 aaKnown RBP14.38□□□□□ -0.11
SPG7-222ENST00000569820 GTF2F1P35269 517 aaKnown RBP eCLIP14.38□□□□□ -0.11
SPG7-222ENST00000569820 PIP4K2BP78356 416 aa14.38□□□□□ -0.11
SPG7-222ENST00000569820 CBX1P83916 185 aa14.38□□□□□ -0.11
SPG7-222ENST00000569820 KAZALD1Q96I82 304 aa14.38□□□□□ -0.11
SPG7-222ENST00000569820 TSPY26PQ9H489 355 aa14.38□□□□□ -0.11
SPG7-222ENST00000569820 NEXNQ0ZGT2 675 aa14.38□□□□□ -0.11
SPG7-222ENST00000569820 MYD88Q99836 296 aa14.38□□□□□ -0.11
SPG7-222ENST00000569820 USP26Q9BXU7 913 aa14.38□□□□□ -0.11
SPG7-222ENST00000569820 SLIT2O94813 1529 aa14.37□□□□□ -0.11
SPG7-222ENST00000569820 SDSP20132 328 aa14.37□□□□□ -0.11
SPG7-222ENST00000569820 PIGBQ92521 554 aa14.37□□□□□ -0.11
SPG7-222ENST00000569820 JARID2Q92833 1246 aaPredicted RBP14.37□□□□□ -0.11
SPG7-222ENST00000569820 SUCLG2Q96I99 432 aa14.37□□□□□ -0.11
SPG7-222ENST00000569820 BCL9O00512 1426 aa14.37□□□□□ -0.11
SPG7-222ENST00000569820 SPATA31A1Q5TZJ5 1347 aa14.37□□□□□ -0.11
SPG7-222ENST00000569820 RAB11FIP3O75154 756 aa14.37□□□□□ -0.11
SPG7-222ENST00000569820 SURF6O75683 361 aaKnown RBP14.37□□□□□ -0.11
SPG7-222ENST00000569820 GCKRQ14397 625 aa14.37□□□□□ -0.11
SPG7-222ENST00000569820 PIBF1Q8WXW3 757 aa14.37□□□□□ -0.11
SPG7-222ENST00000569820 TSC1Q92574 1164 aa14.37□□□□□ -0.11
SPG7-222ENST00000569820 MX1P20591 662 aa14.36□□□□□ -0.11
SPG7-222ENST00000569820 SLC20A2Q08357 652 aa14.36□□□□□ -0.11
SPG7-222ENST00000569820 PLBD2Q8NHP8 589 aa14.36□□□□□ -0.11
SPG7-222ENST00000569820 CHAMP1Q96JM3 812 aa14.36□□□□□ -0.11
SPG7-222ENST00000569820 HDAC5Q9UQL6 1122 aa14.36□□□□□ -0.11
SPG7-222ENST00000569820 A1BGP04217 495 aa14.36□□□□□ -0.11
SPG7-222ENST00000569820 ASAP1Q9ULH1 1129 aa14.36□□□□□ -0.11
SPG7-222ENST00000569820 NOLC1Q14978 699 aaKnown RBP eCLIP14.35□□□□□ -0.11
SPG7-222ENST00000569820 TSHZ3Q63HK5 1081 aa14.35□□□□□ -0.11
SPG7-222ENST00000569820 RHPN1Q8TCX5 695 aa14.35□□□□□ -0.11
SPG7-222ENST00000569820 SYAP1Q96A49 352 aaPredicted RBP14.35□□□□□ -0.11
SPG7-222ENST00000569820 BICC1Q9H694 974 aaKnown RBP14.35□□□□□ -0.11
SPG7-222ENST00000569820 IL1RAPL2Q9NP60 686 aa14.35□□□□□ -0.11
SPG7-222ENST00000569820 STAP2Q9UGK3 403 aa14.35□□□□□ -0.11
SPG7-222ENST00000569820 KIF3AQ9Y496 699 aa14.35□□□□□ -0.11
SPG7-222ENST00000569820 KIF1BPQ96EK5 621 aa14.35□□□□□ -0.11
SPG7-222ENST00000569820 ATG3Q9NT62 314 aa14.35□□□□□ -0.11
SPG7-222ENST00000569820 NUTM2BA6NNL0 878 aaPredicted RBP14.34□□□□□ -0.11
SPG7-222ENST00000569820 NUTM2EB1AL46 878 aaPredicted RBP14.34□□□□□ -0.11
SPG7-222ENST00000569820 EXOC5O00471 708 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms