RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 JDP2Q8WYK2 163 aa17.18■□□□□ 0.34
SPG7-221ENST00000569720 PSMD1Q99460 953 aa17.18■□□□□ 0.34
SPG7-221ENST00000569720 ANKRD36CQ5JPF3 1778 aa17.17■□□□□ 0.34
SPG7-221ENST00000569720 NTSR2O95665 410 aa17.17■□□□□ 0.34
SPG7-221ENST00000569720 NEUROD2Q15784 382 aa17.17■□□□□ 0.34
SPG7-221ENST00000569720 LDHDQ86WU2 507 aa17.17■□□□□ 0.34
SPG7-221ENST00000569720 NLRP3Q96P20 1036 aa17.17■□□□□ 0.34
SPG7-221ENST00000569720 TMX4Q9H1E5 349 aaPredicted RBP17.17■□□□□ 0.34
SPG7-221ENST00000569720 ZNF541Q9H0D2 1346 aa17.17■□□□□ 0.34
SPG7-221ENST00000569720 PDIA6Q15084 440 aa17.16■□□□□ 0.34
SPG7-221ENST00000569720 HSP90AB3PQ58FF7 597 aa17.16■□□□□ 0.34
SPG7-221ENST00000569720 CCDC146Q8IYE0 955 aa17.16■□□□□ 0.34
SPG7-221ENST00000569720 RUNDC1Q96C34 613 aa17.16■□□□□ 0.34
SPG7-221ENST00000569720 CRAMP1Q96RY5 1269 aa17.16■□□□□ 0.34
SPG7-221ENST00000569720 UTP14AQ9BVJ6 771 aaKnown RBP17.16■□□□□ 0.34
SPG7-221ENST00000569720 TAF1DQ9H5J8 278 aaPredicted RBP17.16■□□□□ 0.34
SPG7-221ENST00000569720 HACL1Q9UJ83 578 aa17.16■□□□□ 0.34
SPG7-221ENST00000569720 FZD9O00144 591 aa17.15■□□□□ 0.34
SPG7-221ENST00000569720 POTEIP0CG38 1075 aa17.15■□□□□ 0.34
SPG7-221ENST00000569720 POTEJP0CG39 1038 aa17.15■□□□□ 0.34
SPG7-221ENST00000569720 LRP10Q7Z4F1 713 aa17.15■□□□□ 0.34
SPG7-221ENST00000569720 CREBZFQ9NS37 354 aa17.15■□□□□ 0.34
SPG7-221ENST00000569720 RNF123Q5XPI4 1314 aa17.15■□□□□ 0.34
SPG7-221ENST00000569720 PPEF1O14829 653 aaPredicted RBP17.14■□□□□ 0.33
SPG7-221ENST00000569720 ANXA1P04083 346 aa17.14■□□□□ 0.33
SPG7-221ENST00000569720 EIF6P56537 245 aaKnown RBP17.14■□□□□ 0.33
SPG7-221ENST00000569720 AIMP1Q12904 312 aaKnown RBP17.14■□□□□ 0.33
SPG7-221ENST00000569720 PROSER3Q2NL68 480 aa17.14■□□□□ 0.33
SPG7-221ENST00000569720 EAPPQ56P03 285 aaPredicted RBP17.14■□□□□ 0.33
SPG7-221ENST00000569720 GPC2Q8N158 579 aa17.14■□□□□ 0.33
SPG7-221ENST00000569720 NECTIN2Q92692 538 aa17.14■□□□□ 0.33
SPG7-221ENST00000569720 CLEC11AQ9Y240 323 aa17.14■□□□□ 0.33
SPG7-221ENST00000569720 LAS1LQ9Y4W2 734 aaKnown RBP17.14■□□□□ 0.33
SPG7-221ENST00000569720 PCNTO95613 3336 aa17.14■□□□□ 0.33
SPG7-221ENST00000569720 SNED1Q8TER0 1413 aa17.13■□□□□ 0.33
SPG7-221ENST00000569720 COPS6Q7L5N1 327 aa17.13■□□□□ 0.33
SPG7-221ENST00000569720 PNMA8AQ86V59 439 aaPredicted RBP17.13■□□□□ 0.33
SPG7-221ENST00000569720 CHL1O00533 1208 aa17.12■□□□□ 0.33
SPG7-221ENST00000569720 TCERG1O14776 1098 aaKnown RBP17.12■□□□□ 0.33
SPG7-221ENST00000569720 EPHX2P34913 555 aa17.12■□□□□ 0.33
SPG7-221ENST00000569720 SLC10A5Q5PT55 438 aa17.12■□□□□ 0.33
SPG7-221ENST00000569720 LARGE2Q8N3Y3 721 aa17.12■□□□□ 0.33
SPG7-221ENST00000569720 XAGE3Q8WTP9 111 aa17.12■□□□□ 0.33
SPG7-221ENST00000569720 DDX21Q9NR30 783 aaKnown RBP eCLIP17.12■□□□□ 0.33
SPG7-221ENST00000569720 LAMB2P55268 1798 aa17.11■□□□□ 0.33
SPG7-221ENST00000569720 GJA3Q9Y6H8 435 aa17.11■□□□□ 0.33
SPG7-221ENST00000569720 LMOD1P29536 600 aaPredicted RBP17.1■□□□□ 0.33
SPG7-221ENST00000569720 C3orf67Q6ZVT6 689 aa17.1■□□□□ 0.33
SPG7-221ENST00000569720 NLRP10Q86W26 655 aa17.1■□□□□ 0.33
SPG7-221ENST00000569720 TRMT112Q9UI30 125 aaKnown RBP17.1■□□□□ 0.33
SPG7-221ENST00000569720 ADAMTS8Q9UP79 889 aa17.1■□□□□ 0.33
SPG7-221ENST00000569720 TRIM35Q9UPQ4 493 aa17.1■□□□□ 0.33
SPG7-221ENST00000569720 PASKQ96RG2 1323 aa17.1■□□□□ 0.33
SPG7-221ENST00000569720 ZNF316A6NFI3 1004 aaPredicted RBP17.09■□□□□ 0.33
SPG7-221ENST00000569720 HOXB7P09629 217 aa17.09■□□□□ 0.33
SPG7-221ENST00000569720 HSPA1AP0DMV8 641 aaKnown RBP17.09■□□□□ 0.33
SPG7-221ENST00000569720 HSPA1BP0DMV9 641 aaKnown RBP17.09■□□□□ 0.33
SPG7-221ENST00000569720 TCIRG1Q13488 830 aa17.09■□□□□ 0.33
SPG7-221ENST00000569720 HDGFL1Q5TGJ6 251 aa17.09■□□□□ 0.33
SPG7-221ENST00000569720 NIM1KQ8IY84 436 aa17.09■□□□□ 0.33
SPG7-221ENST00000569720 SUPT20HQ8NEM7 779 aa17.09■□□□□ 0.33
SPG7-221ENST00000569720 VPS33BQ9H267 617 aa17.09■□□□□ 0.33
SPG7-221ENST00000569720 MKRN1Q9UHC7 482 aaKnown RBP17.09■□□□□ 0.33
SPG7-221ENST00000569720 ATP6V0A2Q9Y487 856 aa17.09■□□□□ 0.33
SPG7-221ENST00000569720 ADAMTSL1Q8N6G6 1762 aa17.09■□□□□ 0.33
SPG7-221ENST00000569720 ABCC4O15439 1325 aa17.08■□□□□ 0.32
SPG7-221ENST00000569720 PPIP5K2O43314 1243 aa17.08■□□□□ 0.32
SPG7-221ENST00000569720 BBOX1O75936 387 aa17.08■□□□□ 0.32
SPG7-221ENST00000569720 KRT24Q2M2I5 525 aa17.08■□□□□ 0.32
SPG7-221ENST00000569720 COL13A1Q5TAT6 717 aaPredicted RBP17.08■□□□□ 0.32
SPG7-221ENST00000569720 DDX46Q7L014 1031 aaKnown RBP17.08■□□□□ 0.32
SPG7-221ENST00000569720 CHPF2Q9P2E5 772 aa17.08■□□□□ 0.32
SPG7-221ENST00000569720 SH3TC1Q8TE82 1336 aa17.07■□□□□ 0.32
SPG7-221ENST00000569720 TMEM88BA6NKF7 163 aa17.07■□□□□ 0.32
SPG7-221ENST00000569720 ITGBL1O95965 494 aaPredicted RBP17.07■□□□□ 0.32
SPG7-221ENST00000569720 HCLS1P14317 486 aaPredicted RBP17.07■□□□□ 0.32
SPG7-221ENST00000569720 CFAP44Q96MT7 982 aa17.07■□□□□ 0.32
SPG7-221ENST00000569720 DBF4Q9UBU7 674 aaPredicted RBP17.07■□□□□ 0.32
SPG7-221ENST00000569720 COL4A5P29400 1685 aa17.07■□□□□ 0.32
SPG7-221ENST00000569720 SP8Q8IXZ3 490 aa17.06■□□□□ 0.32
SPG7-221ENST00000569720 CNTROBQ8N137 903 aa17.06■□□□□ 0.32
SPG7-221ENST00000569720 PLBD2Q8NHP8 589 aa17.06■□□□□ 0.32
SPG7-221ENST00000569720 PRKRIP1Q9H875 184 aaPredicted RBP17.06■□□□□ 0.32
SPG7-221ENST00000569720 CNTNAP1P78357 1384 aa17.05■□□□□ 0.32
SPG7-221ENST00000569720 AOC3Q16853 763 aa17.05■□□□□ 0.32
SPG7-221ENST00000569720 DPP8Q6V1X1 898 aaPredicted RBP17.05■□□□□ 0.32
SPG7-221ENST00000569720 ANKRD13DQ6ZTN6 518 aa17.05■□□□□ 0.32
SPG7-221ENST00000569720 HYPKQ9NX55 129 aa17.05■□□□□ 0.32
SPG7-221ENST00000569720 CALD1Q05682 793 aaKnown RBP17.04■□□□□ 0.32
SPG7-221ENST00000569720 GRAPQ13588 217 aa17.04■□□□□ 0.32
SPG7-221ENST00000569720 MAP1SQ66K74 1059 aaPredicted RBP17.04■□□□□ 0.32
SPG7-221ENST00000569720 TMC4Q7Z404 712 aa17.04■□□□□ 0.32
SPG7-221ENST00000569720 TNS4Q8IZW8 715 aa17.04■□□□□ 0.32
SPG7-221ENST00000569720 MPNDQ8N594 471 aa17.04■□□□□ 0.32
SPG7-221ENST00000569720 GRAPLQ8TC17 118 aaPredicted RBP17.04■□□□□ 0.32
SPG7-221ENST00000569720 RTFDC1Q9BY42 306 aaPredicted RBP17.04■□□□□ 0.32
SPG7-221ENST00000569720 TAF1P21675 1872 aa17.03■□□□□ 0.32
SPG7-221ENST00000569720 SCNN1DP51172 638 aa17.03■□□□□ 0.32
SPG7-221ENST00000569720 DUSP27Q5VZP5 1158 aa17.03■□□□□ 0.32
SPG7-221ENST00000569720 USP50Q70EL3 339 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms