RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 SCN4AP35499 1836 aa18.17■□□□□ 0.5
GTF3C1-211ENST00000569653 FKBP4Q02790 459 aaKnown RBP eCLIP18.17■□□□□ 0.5
GTF3C1-211ENST00000569653 LMOD3Q0VAK6 560 aa18.17■□□□□ 0.5
GTF3C1-211ENST00000569653 SOGA3Q5TF21 947 aa18.17■□□□□ 0.5
GTF3C1-211ENST00000569653 NYXQ9GZU5 481 aa18.17■□□□□ 0.5
GTF3C1-211ENST00000569653 DDX60Q8IY21 1712 aaKnown RBP18.16■□□□□ 0.5
GTF3C1-211ENST00000569653 GTF2E1P29083 439 aaPredicted RBP18.16■□□□□ 0.5
GTF3C1-211ENST00000569653 HOXA10P31260 410 aaPredicted RBP18.16■□□□□ 0.5
GTF3C1-211ENST00000569653 SYNE4Q8N205 404 aa18.16■□□□□ 0.5
GTF3C1-211ENST00000569653 XAGE3Q8WTP9 111 aa18.16■□□□□ 0.5
GTF3C1-211ENST00000569653 ADAMTSL1Q8N6G6 1762 aa18.16■□□□□ 0.5
GTF3C1-211ENST00000569653 COL4A1P02462 1669 aa18.15■□□□□ 0.5
GTF3C1-211ENST00000569653 LTBP1Q14766 1721 aa18.15■□□□□ 0.5
GTF3C1-211ENST00000569653 WDR43Q15061 677 aaKnown RBP eCLIP18.15■□□□□ 0.5
GTF3C1-211ENST00000569653 COPS6Q7L5N1 327 aa18.15■□□□□ 0.5
GTF3C1-211ENST00000569653 CCDC184Q52MB2 194 aa18.14■□□□□ 0.49
GTF3C1-211ENST00000569653 DPY19L2Q6NUT2 758 aa18.14■□□□□ 0.49
GTF3C1-211ENST00000569653 ZNF428Q96B54 188 aa18.14■□□□□ 0.49
GTF3C1-211ENST00000569653 LAS1LQ9Y4W2 734 aaKnown RBP18.14■□□□□ 0.49
GTF3C1-211ENST00000569653 ALDH1B1P30837 517 aa18.13■□□□□ 0.49
GTF3C1-211ENST00000569653 AIMP1Q12904 312 aaKnown RBP18.13■□□□□ 0.49
GTF3C1-211ENST00000569653 KLRG1Q96E93 195 aa18.13■□□□□ 0.49
GTF3C1-211ENST00000569653 L3MBTL3Q96JM7 780 aaPredicted RBP18.13■□□□□ 0.49
GTF3C1-211ENST00000569653 DDX21Q9NR30 783 aaKnown RBP eCLIP18.13■□□□□ 0.49
GTF3C1-211ENST00000569653 CHPF2Q9P2E5 772 aa18.13■□□□□ 0.49
GTF3C1-211ENST00000569653 IARSP41252 1262 aaKnown RBP18.12■□□□□ 0.49
GTF3C1-211ENST00000569653 SLC10A5Q5PT55 438 aa18.12■□□□□ 0.49
GTF3C1-211ENST00000569653 NLRP10Q86W26 655 aa18.12■□□□□ 0.49
GTF3C1-211ENST00000569653 RTKN2Q8IZC4 609 aa18.12■□□□□ 0.49
GTF3C1-211ENST00000569653 MBIPQ9NS73 344 aa18.12■□□□□ 0.49
GTF3C1-211ENST00000569653 FZD9O00144 591 aa18.11■□□□□ 0.49
GTF3C1-211ENST00000569653 ZNF853P0CG23 659 aa18.11■□□□□ 0.49
GTF3C1-211ENST00000569653 PARP10Q53GL7 1025 aa18.11■□□□□ 0.49
GTF3C1-211ENST00000569653 JMYQ8N9B5 988 aa18.11■□□□□ 0.49
GTF3C1-211ENST00000569653 RPGRQ92834 1020 aaKnown RBP18.11■□□□□ 0.49
GTF3C1-211ENST00000569653 PSMD1Q99460 953 aa18.11■□□□□ 0.49
GTF3C1-211ENST00000569653 APAF1O14727 1248 aa18.1■□□□□ 0.49
GTF3C1-211ENST00000569653 TCERG1O14776 1098 aaKnown RBP18.1■□□□□ 0.49
GTF3C1-211ENST00000569653 CRAMP1Q96RY5 1269 aa18.1■□□□□ 0.49
GTF3C1-211ENST00000569653 UTP14AQ9BVJ6 771 aaKnown RBP18.1■□□□□ 0.49
GTF3C1-211ENST00000569653 TAF1DQ9H5J8 278 aaPredicted RBP18.1■□□□□ 0.49
GTF3C1-211ENST00000569653 LRRC37AA6NMS7 1700 aa18.09■□□□□ 0.49
GTF3C1-211ENST00000569653 ABCC4O15439 1325 aa18.09■□□□□ 0.49
GTF3C1-211ENST00000569653 HCLS1P14317 486 aaPredicted RBP18.09■□□□□ 0.49
GTF3C1-211ENST00000569653 TCIRG1Q13488 830 aa18.09■□□□□ 0.49
GTF3C1-211ENST00000569653 HDGFL1Q5TGJ6 251 aa18.09■□□□□ 0.49
GTF3C1-211ENST00000569653 PPP1R42Q7Z4L9 355 aa18.09■□□□□ 0.49
GTF3C1-211ENST00000569653 CFAP44Q96MT7 982 aa18.09■□□□□ 0.49
GTF3C1-211ENST00000569653 DUOX1Q9NRD9 1551 aa18.08■□□□□ 0.49
GTF3C1-211ENST00000569653 PPEF1O14829 653 aaPredicted RBP18.08■□□□□ 0.48
GTF3C1-211ENST00000569653 DUSP27Q5VZP5 1158 aa18.08■□□□□ 0.48
GTF3C1-211ENST00000569653 CHADLQ6NUI6 762 aa18.08■□□□□ 0.48
GTF3C1-211ENST00000569653 RNF123Q5XPI4 1314 aa18.07■□□□□ 0.48
GTF3C1-211ENST00000569653 HOXB7P09629 217 aa18.07■□□□□ 0.48
GTF3C1-211ENST00000569653 RBM17Q96I25 401 aaKnown RBP18.07■□□□□ 0.48
GTF3C1-211ENST00000569653 NLRP3Q96P20 1036 aa18.06■□□□□ 0.48
GTF3C1-211ENST00000569653 ISCA1Q9BUE6 129 aa18.06■□□□□ 0.48
GTF3C1-211ENST00000569653 PASKQ96RG2 1323 aa18.05■□□□□ 0.48
GTF3C1-211ENST00000569653 IFFO2Q5TF58 517 aa18.05■□□□□ 0.48
GTF3C1-211ENST00000569653 CC2D2BQ6DHV5 1058 aa18.05■□□□□ 0.48
GTF3C1-211ENST00000569653 ATP6V0A2Q9Y487 856 aa18.05■□□□□ 0.48
GTF3C1-211ENST00000569653 ATP5J2-PTCD1G3V325 749 aa18.04■□□□□ 0.48
GTF3C1-211ENST00000569653 HSP90AB3PQ58FF7 597 aa18.04■□□□□ 0.48
GTF3C1-211ENST00000569653 PLBD2Q8NHP8 589 aa18.04■□□□□ 0.48
GTF3C1-211ENST00000569653 TRMT112Q9UI30 125 aaKnown RBP18.04■□□□□ 0.48
GTF3C1-211ENST00000569653 SH3TC1Q8TE82 1336 aa18.03■□□□□ 0.48
GTF3C1-211ENST00000569653 IQCA1LA6NCM1 817 aa18.03■□□□□ 0.48
GTF3C1-211ENST00000569653 ITGBL1O95965 494 aaPredicted RBP18.03■□□□□ 0.48
GTF3C1-211ENST00000569653 LDHDQ86WU2 507 aa18.03■□□□□ 0.48
GTF3C1-211ENST00000569653 C8orf58Q8NAV2 365 aa18.03■□□□□ 0.48
GTF3C1-211ENST00000569653 IFT57Q9NWB7 429 aa18.03■□□□□ 0.48
GTF3C1-211ENST00000569653 DBF4Q9UBU7 674 aaPredicted RBP18.03■□□□□ 0.48
GTF3C1-211ENST00000569653 ELL2O00472 640 aaPredicted RBP18.02■□□□□ 0.48
GTF3C1-211ENST00000569653 EPHX2P34913 555 aa18.02■□□□□ 0.48
GTF3C1-211ENST00000569653 SCNN1DP51172 638 aa18.02■□□□□ 0.48
GTF3C1-211ENST00000569653 ANKRD13DQ6ZTN6 518 aa18.02■□□□□ 0.48
GTF3C1-211ENST00000569653 GPC2Q8N158 579 aa18.02■□□□□ 0.48
GTF3C1-211ENST00000569653 PHAXQ9H814 394 aaKnown RBP18.02■□□□□ 0.48
GTF3C1-211ENST00000569653 HACL1Q9UJ83 578 aa18.02■□□□□ 0.48
GTF3C1-211ENST00000569653 AOC3Q16853 763 aa18.01■□□□□ 0.47
GTF3C1-211ENST00000569653 EAPPQ56P03 285 aaPredicted RBP18.01■□□□□ 0.47
GTF3C1-211ENST00000569653 LARGE2Q8N3Y3 721 aa18.01■□□□□ 0.47
GTF3C1-211ENST00000569653 FAM89AQ96GI7 184 aa18.01■□□□□ 0.47
GTF3C1-211ENST00000569653 RTFDC1Q9BY42 306 aaPredicted RBP18.01■□□□□ 0.47
GTF3C1-211ENST00000569653 TSPYL6Q8N831 410 aa18■□□□□ 0.47
GTF3C1-211ENST00000569653 JDP2Q8WYK2 163 aa18■□□□□ 0.47
GTF3C1-211ENST00000569653 GJA3Q9Y6H8 435 aa18■□□□□ 0.47
GTF3C1-211ENST00000569653 PPIP5K2O43314 1243 aa17.99■□□□□ 0.47
GTF3C1-211ENST00000569653 EPS15P42566 896 aa17.99■□□□□ 0.47
GTF3C1-211ENST00000569653 GNAI1P63096 354 aa17.99■□□□□ 0.47
GTF3C1-211ENST00000569653 GRAPQ13588 217 aa17.99■□□□□ 0.47
GTF3C1-211ENST00000569653 RTL5Q5HYW3 569 aaPredicted RBP17.99■□□□□ 0.47
GTF3C1-211ENST00000569653 MAP1SQ66K74 1059 aaPredicted RBP17.99■□□□□ 0.47
GTF3C1-211ENST00000569653 GRAPLQ8TC17 118 aaPredicted RBP17.99■□□□□ 0.47
GTF3C1-211ENST00000569653 CREBZFQ9NS37 354 aa17.99■□□□□ 0.47
GTF3C1-211ENST00000569653 HYPKQ9NX55 129 aa17.99■□□□□ 0.47
GTF3C1-211ENST00000569653 GRIPAP1Q4V328 841 aa17.98■□□□□ 0.47
GTF3C1-211ENST00000569653 SP8Q8IXZ3 490 aa17.98■□□□□ 0.47
GTF3C1-211ENST00000569653 CELF1Q92879 486 aaKnown RBP17.98■□□□□ 0.47
GTF3C1-211ENST00000569653 TSR2Q969E8 191 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms