RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 SUPT20HQ8NEM7 779 aa11.66□□□□□ -0.54
SMG1-216ENST00000569122 GCC1Q96CN9 775 aa11.66□□□□□ -0.54
SMG1-216ENST00000569122 GPRC5DQ9NZD1 345 aa11.66□□□□□ -0.54
SMG1-216ENST00000569122 CDHR2Q9BYE9 1310 aa11.65□□□□□ -0.54
SMG1-216ENST00000569122 HOXA10P31260 410 aaPredicted RBP11.65□□□□□ -0.54
SMG1-216ENST00000569122 FMR1Q06787 632 aaKnown RBP eCLIP11.65□□□□□ -0.54
SMG1-216ENST00000569122 CCDC102AQ96A19 550 aa11.65□□□□□ -0.54
SMG1-216ENST00000569122 RBM17Q96I25 401 aaKnown RBP11.65□□□□□ -0.54
SMG1-216ENST00000569122 PGAP2Q9UHJ9 254 aa11.65□□□□□ -0.54
SMG1-216ENST00000569122 USP16Q9Y5T5 823 aa11.65□□□□□ -0.54
SMG1-216ENST00000569122 KIF7Q2M1P5 1343 aa11.64□□□□□ -0.55
SMG1-216ENST00000569122 ANKRD31Q8N7Z5 1873 aa11.64□□□□□ -0.55
SMG1-216ENST00000569122 FAM177BA6PVY3 158 aa11.64□□□□□ -0.55
SMG1-216ENST00000569122 PPIP5K2O43314 1243 aa11.64□□□□□ -0.55
SMG1-216ENST00000569122 TNIP1Q15025 636 aa11.64□□□□□ -0.55
SMG1-216ENST00000569122 REM2Q8IYK8 340 aaPredicted RBP11.64□□□□□ -0.55
SMG1-216ENST00000569122 CRAMP1Q96RY5 1269 aa11.64□□□□□ -0.55
SMG1-216ENST00000569122 ZNRF3Q9ULT6 936 aa11.64□□□□□ -0.55
SMG1-216ENST00000569122 THSD7BQ9C0I4 1608 aa11.64□□□□□ -0.55
SMG1-216ENST00000569122 COL11A2P13942 1736 aaPredicted RBP11.63□□□□□ -0.55
SMG1-216ENST00000569122 ERVV-1B6SEH8 477 aa11.63□□□□□ -0.55
SMG1-216ENST00000569122 NBPF15Q8N660 670 aa11.63□□□□□ -0.55
SMG1-216ENST00000569122 BCL2L13Q9BXK5 485 aa11.63□□□□□ -0.55
SMG1-216ENST00000569122 ZNF408Q9H9D4 720 aa11.63□□□□□ -0.55
SMG1-216ENST00000569122 SCN7AQ01118 1682 aa11.62□□□□□ -0.55
SMG1-216ENST00000569122 H7C1D1 291 aa11.62□□□□□ -0.55
SMG1-216ENST00000569122 PPEF1O14829 653 aaPredicted RBP11.62□□□□□ -0.55
SMG1-216ENST00000569122 HUNKP57058 714 aa11.62□□□□□ -0.55
SMG1-216ENST00000569122 PKN2Q16513 984 aaKnown RBP11.62□□□□□ -0.55
SMG1-216ENST00000569122 C2orf69Q8N8R5 385 aa11.62□□□□□ -0.55
SMG1-216ENST00000569122 RTF1Q92541 710 aaKnown RBP11.62□□□□□ -0.55
SMG1-216ENST00000569122 GLIS2Q9BZE0 524 aaPredicted RBP11.62□□□□□ -0.55
SMG1-216ENST00000569122 U2SURPO15042 1029 aaKnown RBP11.61□□□□□ -0.55
SMG1-216ENST00000569122 SOX10P56693 466 aa11.61□□□□□ -0.55
SMG1-216ENST00000569122 CXCL9Q07325 125 aa11.61□□□□□ -0.55
SMG1-216ENST00000569122 AMER1Q5JTC6 1135 aaPredicted RBP11.61□□□□□ -0.55
SMG1-216ENST00000569122 RGMBQ6NW40 437 aa11.61□□□□□ -0.55
SMG1-216ENST00000569122 CEMIPQ8WUJ3 1361 aa11.61□□□□□ -0.55
SMG1-216ENST00000569122 NPC1L1Q9UHC9 1359 aa11.61□□□□□ -0.55
SMG1-216ENST00000569122 SNED1Q8TER0 1413 aa11.6□□□□□ -0.55
SMG1-216ENST00000569122 PIP4K2AP48426 406 aaPredicted RBP11.6□□□□□ -0.55
SMG1-216ENST00000569122 GMPSP49915 693 aaPredicted RBP11.6□□□□□ -0.55
SMG1-216ENST00000569122 CTU1Q7Z7A3 348 aaKnown RBP11.6□□□□□ -0.55
SMG1-216ENST00000569122 NLRP3Q96P20 1036 aa11.6□□□□□ -0.55
SMG1-216ENST00000569122 ARFGEF2Q9Y6D5 1785 aa11.59□□□□□ -0.55
SMG1-216ENST00000569122 PDE4DIPQ5VU43 2346 aa11.59□□□□□ -0.55
SMG1-216ENST00000569122 KCNQ3O43525 872 aa11.59□□□□□ -0.55
SMG1-216ENST00000569122 BBOX1O75936 387 aa11.59□□□□□ -0.55
SMG1-216ENST00000569122 HLFQ16534 295 aa11.59□□□□□ -0.55
SMG1-216ENST00000569122 AOC3Q16853 763 aa11.59□□□□□ -0.55
SMG1-216ENST00000569122 KIF6Q6ZMV9 814 aa11.59□□□□□ -0.55
SMG1-216ENST00000569122 PPP1R42Q7Z4L9 355 aa11.59□□□□□ -0.55
SMG1-216ENST00000569122 NUTM1Q86Y26 1132 aa11.59□□□□□ -0.55
SMG1-216ENST00000569122 RTFDC1Q9BY42 306 aaPredicted RBP11.59□□□□□ -0.55
SMG1-216ENST00000569122 ATP6V0A2Q9Y487 856 aa11.59□□□□□ -0.55
SMG1-216ENST00000569122 UBR2Q8IWV8 1755 aa11.59□□□□□ -0.55
SMG1-216ENST00000569122 IBTKQ9P2D0 1353 aaPredicted RBP11.58□□□□□ -0.56
SMG1-216ENST00000569122 NBPF26B4DH59 902 aa11.58□□□□□ -0.56
SMG1-216ENST00000569122 TRPA1O75762 1119 aa11.58□□□□□ -0.56
SMG1-216ENST00000569122 HSPA5P11021 654 aaKnown RBP11.58□□□□□ -0.56
SMG1-216ENST00000569122 ZNF157P51786 506 aaPredicted RBP11.58□□□□□ -0.56
SMG1-216ENST00000569122 NBPF10Q6P3W6 841 aaKnown RBP11.58□□□□□ -0.56
SMG1-216ENST00000569122 DPP8Q6V1X1 898 aaPredicted RBP11.58□□□□□ -0.56
SMG1-216ENST00000569122 DPF2Q92785 391 aa11.58□□□□□ -0.56
SMG1-216ENST00000569122 GBA2Q9HCG7 927 aaPredicted RBP11.58□□□□□ -0.56
SMG1-216ENST00000569122 CNOT7Q9UIV1 285 aaKnown RBP11.58□□□□□ -0.56
SMG1-216ENST00000569122 TCERG1O14776 1098 aaKnown RBP11.57□□□□□ -0.56
SMG1-216ENST00000569122 HTATSF1O43719 755 aaKnown RBP11.57□□□□□ -0.56
SMG1-216ENST00000569122 KIF23Q02241 960 aaPredicted RBP11.57□□□□□ -0.56
SMG1-216ENST00000569122 PARP10Q53GL7 1025 aa11.57□□□□□ -0.56
SMG1-216ENST00000569122 KRT26Q7Z3Y9 468 aa11.57□□□□□ -0.56
SMG1-216ENST00000569122 USP48Q86UV5 1035 aa11.57□□□□□ -0.56
SMG1-216ENST00000569122 MPNDQ8N594 471 aa11.57□□□□□ -0.56
SMG1-216ENST00000569122 RNF186Q9NXI6 227 aa11.57□□□□□ -0.56
SMG1-216ENST00000569122 RIC1Q4ADV7 1423 aa11.57□□□□□ -0.56
SMG1-216ENST00000569122 LTBP1Q14766 1721 aa11.57□□□□□ -0.56
SMG1-216ENST00000569122 MAP3K15Q6ZN16 1313 aa11.57□□□□□ -0.56
SMG1-216ENST00000569122 PRAMEF22A3QJZ6 481 aa11.56□□□□□ -0.56
SMG1-216ENST00000569122 HIRAP54198 1017 aaPredicted RBP11.56□□□□□ -0.56
SMG1-216ENST00000569122 KIAA2012Q0VF49 1180 aa11.56□□□□□ -0.56
SMG1-216ENST00000569122 SP8Q8IXZ3 490 aa11.56□□□□□ -0.56
SMG1-216ENST00000569122 DCPSQ96C86 337 aaKnown RBP11.56□□□□□ -0.56
SMG1-216ENST00000569122 NUDCQ9Y266 331 aa11.56□□□□□ -0.56
SMG1-216ENST00000569122 TNRC18O15417 2968 aaPredicted RBP11.55□□□□□ -0.56
SMG1-216ENST00000569122 FAM155AB1AL88 458 aaPredicted RBP11.55□□□□□ -0.56
SMG1-216ENST00000569122 RAD17O75943 681 aa11.55□□□□□ -0.56
SMG1-216ENST00000569122 TAF7Q15545 349 aaPredicted RBP11.55□□□□□ -0.56
SMG1-216ENST00000569122 TMC4Q7Z404 712 aa11.55□□□□□ -0.56
SMG1-216ENST00000569122 PNISRQ8TF01 805 aaKnown RBP11.55□□□□□ -0.56
SMG1-216ENST00000569122 CFAP53Q96M91 514 aa11.55□□□□□ -0.56
SMG1-216ENST00000569122 ZIC5Q96T25 663 aa11.55□□□□□ -0.56
SMG1-216ENST00000569122 HDAC9Q9UKV0 1011 aa11.55□□□□□ -0.56
SMG1-216ENST00000569122 HPS5Q9UPZ3 1129 aa11.55□□□□□ -0.56
SMG1-216ENST00000569122 CLSPNQ9HAW4 1339 aa11.55□□□□□ -0.56
SMG1-216ENST00000569122 ABCC12Q96J65 1359 aa11.54□□□□□ -0.56
SMG1-216ENST00000569122 RPS12P25398 132 aaKnown RBP11.54□□□□□ -0.56
SMG1-216ENST00000569122 PRKAR2BP31323 418 aa11.54□□□□□ -0.56
SMG1-216ENST00000569122 SLC10A5Q5PT55 438 aa11.54□□□□□ -0.56
SMG1-216ENST00000569122 SUSD4Q5VX71 490 aa11.54□□□□□ -0.56
SMG1-216ENST00000569122 MICALL2Q8IY33 904 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms