RNA–Protein interactions for RNA: ENST00000568820.5

LYRM1-210, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-210ENST00000568820 ATP10DQ9P241 1426 aa13.92□□□□□ -0.18
LYRM1-210ENST00000568820 NHSL1Q5SYE7 1610 aa13.92□□□□□ -0.18
LYRM1-210ENST00000568820 KCNQ3O43525 872 aa13.91□□□□□ -0.18
LYRM1-210ENST00000568820 EIF5BO60841 1220 aaKnown RBP13.91□□□□□ -0.18
LYRM1-210ENST00000568820 VIRMAQ69YN4 1812 aaKnown RBP13.91□□□□□ -0.18
LYRM1-210ENST00000568820 ZNF790Q6PG37 636 aa13.91□□□□□ -0.18
LYRM1-210ENST00000568820 HYPKQ9NX55 129 aa13.91□□□□□ -0.18
LYRM1-210ENST00000568820 CHPF2Q9P2E5 772 aa13.91□□□□□ -0.18
LYRM1-210ENST00000568820 DAXXQ9UER7 740 aaPredicted RBP13.91□□□□□ -0.18
LYRM1-210ENST00000568820 PCDH11XQ9BZA7 1347 aa13.9□□□□□ -0.18
LYRM1-210ENST00000568820 PCDH11YQ9BZA8 1340 aa13.9□□□□□ -0.18
LYRM1-210ENST00000568820 EVA1CP58658 441 aa13.9□□□□□ -0.18
LYRM1-210ENST00000568820 BMP2KLQ5H9B9 411 aa13.9□□□□□ -0.18
LYRM1-210ENST00000568820 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.9□□□□□ -0.18
LYRM1-210ENST00000568820 ANP32EQ9BTT0 268 aa13.9□□□□□ -0.18
LYRM1-210ENST00000568820 CARD10Q9BWT7 1032 aa13.9□□□□□ -0.18
LYRM1-210ENST00000568820 SRCIN1Q9C0H9 1055 aa13.9□□□□□ -0.18
LYRM1-210ENST00000568820 NPDC1Q9NQX5 325 aaPredicted RBP13.9□□□□□ -0.18
LYRM1-210ENST00000568820 COL5A2P05997 1499 aaPredicted RBP13.9□□□□□ -0.18
LYRM1-210ENST00000568820 KDM6AO15550 1401 aaPredicted RBP13.89□□□□□ -0.19
LYRM1-210ENST00000568820 TTC5Q8N0Z6 440 aa13.89□□□□□ -0.19
LYRM1-210ENST00000568820 PHAXQ9H814 394 aaKnown RBP13.89□□□□□ -0.19
LYRM1-210ENST00000568820 HDAC5Q9UQL6 1122 aa13.89□□□□□ -0.19
LYRM1-210ENST00000568820 PKD1L3Q7Z443 1732 aa13.89□□□□□ -0.19
LYRM1-210ENST00000568820 CYP27B1O15528 508 aa13.88□□□□□ -0.19
LYRM1-210ENST00000568820 DDX58O95786 925 aaKnown RBP13.88□□□□□ -0.19
LYRM1-210ENST00000568820 UBTFL1P0CB47 393 aaPredicted RBP13.88□□□□□ -0.19
LYRM1-210ENST00000568820 NFATC2IPQ8NCF5 419 aa13.88□□□□□ -0.19
LYRM1-210ENST00000568820 ZCRB1Q8TBF4 217 aaKnown RBP13.88□□□□□ -0.19
LYRM1-210ENST00000568820 DNAAF4Q8WXU2 420 aa13.88□□□□□ -0.19
LYRM1-210ENST00000568820 SIPA1L3O60292 1781 aaPredicted RBP13.88□□□□□ -0.19
LYRM1-210ENST00000568820 MRC1P22897 1456 aa13.88□□□□□ -0.19
LYRM1-210ENST00000568820 IL2RBP14784 551 aa13.88□□□□□ -0.19
LYRM1-210ENST00000568820 CABP4P57796 275 aa13.88□□□□□ -0.19
LYRM1-210ENST00000568820 ADGRD1Q6QNK2 874 aa13.88□□□□□ -0.19
LYRM1-210ENST00000568820 ANKRD13DQ6ZTN6 518 aa13.88□□□□□ -0.19
LYRM1-210ENST00000568820 VPS9D1Q9Y2B5 631 aa13.88□□□□□ -0.19
LYRM1-210ENST00000568820 SCN11AQ9UI33 1791 aa13.87□□□□□ -0.19
LYRM1-210ENST00000568820 PTGDRQ13258 359 aa13.87□□□□□ -0.19
LYRM1-210ENST00000568820 DDX21Q9NR30 783 aaKnown RBP eCLIP13.87□□□□□ -0.19
LYRM1-210ENST00000568820 PARP4Q9UKK3 1724 aaKnown RBP13.87□□□□□ -0.19
LYRM1-210ENST00000568820 PI4KAP2A4QPH2 592 aa13.86□□□□□ -0.19
LYRM1-210ENST00000568820 ATP8B2P98198 1209 aa13.86□□□□□ -0.19
LYRM1-210ENST00000568820 PI4KAP1Q8N8J0 262 aa13.86□□□□□ -0.19
LYRM1-210ENST00000568820 FMNL2Q96PY5 1086 aa13.86□□□□□ -0.19
LYRM1-210ENST00000568820 N4BP2Q86UW6 1770 aaPredicted RBP13.86□□□□□ -0.19
LYRM1-210ENST00000568820 ABCA3Q99758 1704 aa13.86□□□□□ -0.19
LYRM1-210ENST00000568820 ERVV-2B6SEH9 535 aa13.85□□□□□ -0.19
LYRM1-210ENST00000568820 ONECUT3O60422 494 aaPredicted RBP13.85□□□□□ -0.19
LYRM1-210ENST00000568820 ALDH1L1O75891 902 aa13.85□□□□□ -0.19
LYRM1-210ENST00000568820 SNRPA1P09661 255 aaKnown RBP13.85□□□□□ -0.19
LYRM1-210ENST00000568820 KSR2Q6VAB6 950 aa13.85□□□□□ -0.19
LYRM1-210ENST00000568820 USP44Q9H0E7 712 aa13.85□□□□□ -0.19
LYRM1-210ENST00000568820 GPR37O15354 613 aa13.85□□□□□ -0.19
LYRM1-210ENST00000568820 BEND3Q5T5X7 828 aa13.85□□□□□ -0.19
LYRM1-210ENST00000568820 STRN4Q9NRL3 753 aa13.85□□□□□ -0.19
LYRM1-210ENST00000568820 RBM27Q9P2N5 1060 aaKnown RBP13.85□□□□□ -0.19
LYRM1-210ENST00000568820 SLC39A6Q13433 755 aa13.84□□□□□ -0.19
LYRM1-210ENST00000568820 TBC1D32Q96NH3 1257 aa13.84□□□□□ -0.19
LYRM1-210ENST00000568820 PRSS12P56730 875 aa13.83□□□□□ -0.2
LYRM1-210ENST00000568820 BECN1Q14457 450 aa13.83□□□□□ -0.2
LYRM1-210ENST00000568820 PROX2Q3B8N5 592 aa13.83□□□□□ -0.2
LYRM1-210ENST00000568820 GPIHBP1Q8IV16 184 aa13.83□□□□□ -0.2
LYRM1-210ENST00000568820 PLEKHM2Q8IWE5 1019 aa13.83□□□□□ -0.2
LYRM1-210ENST00000568820 LRRFIP2Q9Y608 721 aaKnown RBP13.83□□□□□ -0.2
LYRM1-210ENST00000568820 ADCY9O60503 1353 aa13.83□□□□□ -0.2
LYRM1-210ENST00000568820 AHDC1Q5TGY3 1603 aaPredicted RBP13.83□□□□□ -0.2
LYRM1-210ENST00000568820 TRIM6-TRIM34B2RNG4 842 aa13.82□□□□□ -0.2
LYRM1-210ENST00000568820 LARP1Q6PKG0 1096 aaKnown RBP13.82□□□□□ -0.2
LYRM1-210ENST00000568820 ZNF496Q96IT1 587 aaPredicted RBP13.82□□□□□ -0.2
LYRM1-210ENST00000568820 MAP3K2Q9Y2U5 619 aa13.82□□□□□ -0.2
LYRM1-210ENST00000568820 IBTKQ9P2D0 1353 aaPredicted RBP13.82□□□□□ -0.2
LYRM1-210ENST00000568820 HRO43593 1189 aa13.82□□□□□ -0.2
LYRM1-210ENST00000568820 TTC13Q8NBP0 860 aa13.82□□□□□ -0.2
LYRM1-210ENST00000568820 LINS1Q8NG48 757 aa13.82□□□□□ -0.2
LYRM1-210ENST00000568820 LRRCC1Q9C099 1032 aa13.82□□□□□ -0.2
LYRM1-210ENST00000568820 ANXA1P04083 346 aa13.81□□□□□ -0.2
LYRM1-210ENST00000568820 NEXNQ0ZGT2 675 aa13.81□□□□□ -0.2
LYRM1-210ENST00000568820 HSP90AB4PQ58FF6 505 aa13.81□□□□□ -0.2
LYRM1-210ENST00000568820 SSH3Q8TE77 659 aa13.81□□□□□ -0.2
LYRM1-210ENST00000568820 ERBB4Q15303 1308 aa13.81□□□□□ -0.2
LYRM1-210ENST00000568820 ROBO1Q9Y6N7 1651 aa13.8□□□□□ -0.2
LYRM1-210ENST00000568820 PRAMEF22A3QJZ6 481 aa13.8□□□□□ -0.2
LYRM1-210ENST00000568820 RAB11FIP3O75154 756 aa13.8□□□□□ -0.2
LYRM1-210ENST00000568820 CDC45O75419 566 aa13.8□□□□□ -0.2
LYRM1-210ENST00000568820 MFAP1P55081 439 aaKnown RBP13.8□□□□□ -0.2
LYRM1-210ENST00000568820 PROSER3Q2NL68 480 aa13.8□□□□□ -0.2
LYRM1-210ENST00000568820 TTC22Q5TAA0 569 aa13.8□□□□□ -0.2
LYRM1-210ENST00000568820 CASC1Q6TDU7 716 aa13.8□□□□□ -0.2
LYRM1-210ENST00000568820 C22orf23Q9BZE7 217 aa13.8□□□□□ -0.2
LYRM1-210ENST00000568820 BTG4Q9NY30 223 aa13.8□□□□□ -0.2
LYRM1-210ENST00000568820 C9orf78Q9NZ63 289 aaPredicted RBP13.8□□□□□ -0.2
LYRM1-210ENST00000568820 PNMA6EA0A0J9YXQ4 647 aa13.79□□□□□ -0.2
LYRM1-210ENST00000568820 RIC3Q7Z5B4 369 aa13.79□□□□□ -0.2
LYRM1-210ENST00000568820 OSBPL3Q9H4L5 887 aa13.79□□□□□ -0.2
LYRM1-210ENST00000568820 RABGEF1Q9UJ41 708 aa13.79□□□□□ -0.2
LYRM1-210ENST00000568820 APBB1O00213 710 aa13.79□□□□□ -0.2
LYRM1-210ENST00000568820 DDX54Q8TDD1 881 aaKnown RBP13.79□□□□□ -0.2
LYRM1-210ENST00000568820 TSKSQ9UJT2 592 aa13.79□□□□□ -0.2
LYRM1-210ENST00000568820 LTBP4Q8N2S1 1624 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms