RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 DDX21Q9NR30 783 aaKnown RBP eCLIP24.71■■□□□ 1.55
SPSB3-210ENST00000568416 CEP350Q5VT06 3117 aa24.71■■□□□ 1.55
SPSB3-210ENST00000568416 XAGE3Q8WTP9 111 aa24.7■■□□□ 1.54
SPSB3-210ENST00000568416 ZNF277Q9NRM2 450 aaPredicted RBP24.7■■□□□ 1.54
SPSB3-210ENST00000568416 RPGRQ92834 1020 aaKnown RBP24.69■■□□□ 1.54
SPSB3-210ENST00000568416 HOXB7P09629 217 aa24.68■■□□□ 1.54
SPSB3-210ENST00000568416 HTRA3P83110 453 aa24.68■■□□□ 1.54
SPSB3-210ENST00000568416 AIMP1Q12904 312 aaKnown RBP24.68■■□□□ 1.54
SPSB3-210ENST00000568416 C3orf67Q6ZVT6 689 aa24.68■■□□□ 1.54
SPSB3-210ENST00000568416 CFAP44Q96MT7 982 aa24.68■■□□□ 1.54
SPSB3-210ENST00000568416 UTP14AQ9BVJ6 771 aaKnown RBP24.68■■□□□ 1.54
SPSB3-210ENST00000568416 HSP90AB3PQ58FF7 597 aa24.67■■□□□ 1.54
SPSB3-210ENST00000568416 SLC10A5Q5PT55 438 aa24.67■■□□□ 1.54
SPSB3-210ENST00000568416 CC2D2BQ6DHV5 1058 aa24.67■■□□□ 1.54
SPSB3-210ENST00000568416 SYNE4Q8N205 404 aa24.67■■□□□ 1.54
SPSB3-210ENST00000568416 CRAMP1Q96RY5 1269 aa24.67■■□□□ 1.54
SPSB3-210ENST00000568416 IARSP41252 1262 aaKnown RBP24.66■■□□□ 1.54
SPSB3-210ENST00000568416 RBM17Q96I25 401 aaKnown RBP24.66■■□□□ 1.54
SPSB3-210ENST00000568416 PSMD1Q99460 953 aa24.66■■□□□ 1.54
SPSB3-210ENST00000568416 CHPF2Q9P2E5 772 aa24.66■■□□□ 1.54
SPSB3-210ENST00000568416 RNF123Q5XPI4 1314 aa24.65■■□□□ 1.54
SPSB3-210ENST00000568416 HDGFL1Q5TGJ6 251 aa24.65■■□□□ 1.54
SPSB3-210ENST00000568416 NLRP10Q86W26 655 aa24.65■■□□□ 1.54
SPSB3-210ENST00000568416 L3MBTL3Q96JM7 780 aaPredicted RBP24.65■■□□□ 1.54
SPSB3-210ENST00000568416 NLRP3Q96P20 1036 aa24.65■■□□□ 1.54
SPSB3-210ENST00000568416 ZNF541Q9H0D2 1346 aa24.64■■□□□ 1.54
SPSB3-210ENST00000568416 APAF1O14727 1248 aa24.64■■□□□ 1.54
SPSB3-210ENST00000568416 ZNF853P0CG23 659 aa24.64■■□□□ 1.54
SPSB3-210ENST00000568416 TCIRG1Q13488 830 aa24.64■■□□□ 1.54
SPSB3-210ENST00000568416 KLRG1Q96E93 195 aa24.63■■□□□ 1.53
SPSB3-210ENST00000568416 MBIPQ9NS73 344 aa24.63■■□□□ 1.53
SPSB3-210ENST00000568416 FZD9O00144 591 aa24.62■■□□□ 1.53
SPSB3-210ENST00000568416 PPEF1O14829 653 aaPredicted RBP24.62■■□□□ 1.53
SPSB3-210ENST00000568416 GRIPAP1Q4V328 841 aa24.62■■□□□ 1.53
SPSB3-210ENST00000568416 IQCA1LA6NCM1 817 aa24.61■■□□□ 1.53
SPSB3-210ENST00000568416 DUSP27Q5VZP5 1158 aa24.61■■□□□ 1.53
SPSB3-210ENST00000568416 SLC51AQ86UW1 340 aa24.61■■□□□ 1.53
SPSB3-210ENST00000568416 DBF4Q9UBU7 674 aaPredicted RBP24.61■■□□□ 1.53
SPSB3-210ENST00000568416 ANKRD36CQ5JPF3 1778 aa24.61■■□□□ 1.53
SPSB3-210ENST00000568416 POTEIP0CG38 1075 aa24.6■■□□□ 1.53
SPSB3-210ENST00000568416 POTEJP0CG39 1038 aa24.6■■□□□ 1.53
SPSB3-210ENST00000568416 CHADLQ6NUI6 762 aa24.6■■□□□ 1.53
SPSB3-210ENST00000568416 PLBD2Q8NHP8 589 aa24.6■■□□□ 1.53
SPSB3-210ENST00000568416 IFT57Q9NWB7 429 aa24.6■■□□□ 1.53
SPSB3-210ENST00000568416 TAF1DQ9H5J8 278 aaPredicted RBP24.59■■□□□ 1.53
SPSB3-210ENST00000568416 TRMT112Q9UI30 125 aaKnown RBP24.59■■□□□ 1.53
SPSB3-210ENST00000568416 ABCC4O15439 1325 aa24.59■■□□□ 1.53
SPSB3-210ENST00000568416 TCERG1O14776 1098 aaKnown RBP24.58■■□□□ 1.53
SPSB3-210ENST00000568416 GNAI1P63096 354 aa24.58■■□□□ 1.53
SPSB3-210ENST00000568416 ANKRD13DQ6ZTN6 518 aa24.58■■□□□ 1.53
SPSB3-210ENST00000568416 JMYQ8N9B5 988 aa24.58■■□□□ 1.53
SPSB3-210ENST00000568416 COL4A5P29400 1685 aa24.58■■□□□ 1.53
SPSB3-210ENST00000568416 SH3TC1Q8TE82 1336 aa24.58■■□□□ 1.52
SPSB3-210ENST00000568416 HCLS1P14317 486 aaPredicted RBP24.57■■□□□ 1.52
SPSB3-210ENST00000568416 CALD1Q05682 793 aaKnown RBP24.57■■□□□ 1.52
SPSB3-210ENST00000568416 JDP2Q8WYK2 163 aa24.57■■□□□ 1.52
SPSB3-210ENST00000568416 HYPKQ9NX55 129 aa24.57■■□□□ 1.52
SPSB3-210ENST00000568416 ATP6V0A2Q9Y487 856 aa24.57■■□□□ 1.52
SPSB3-210ENST00000568416 CCDC184Q52MB2 194 aa24.56■■□□□ 1.52
SPSB3-210ENST00000568416 ISCA1Q9BUE6 129 aa24.56■■□□□ 1.52
SPSB3-210ENST00000568416 GPC2Q8N158 579 aa24.55■■□□□ 1.52
SPSB3-210ENST00000568416 HACL1Q9UJ83 578 aa24.55■■□□□ 1.52
SPSB3-210ENST00000568416 SCN4AP35499 1836 aa24.54■■□□□ 1.52
SPSB3-210ENST00000568416 ZEB1P37275 1124 aaPredicted RBP24.54■■□□□ 1.52
SPSB3-210ENST00000568416 LDHDQ86WU2 507 aa24.54■■□□□ 1.52
SPSB3-210ENST00000568416 BBOX1O75936 387 aa24.53■■□□□ 1.52
SPSB3-210ENST00000568416 LARGE2Q8N3Y3 721 aa24.53■■□□□ 1.52
SPSB3-210ENST00000568416 EIF6P56537 245 aaKnown RBP24.52■■□□□ 1.52
SPSB3-210ENST00000568416 SP8Q8IXZ3 490 aa24.52■■□□□ 1.52
SPSB3-210ENST00000568416 TMX4Q9H1E5 349 aaPredicted RBP24.52■■□□□ 1.52
SPSB3-210ENST00000568416 LAMB2P55268 1798 aa24.52■■□□□ 1.52
SPSB3-210ENST00000568416 ATP5J2-PTCD1G3V325 749 aa24.51■■□□□ 1.51
SPSB3-210ENST00000568416 ELL2O00472 640 aaPredicted RBP24.51■■□□□ 1.51
SPSB3-210ENST00000568416 EPHX2P34913 555 aa24.51■■□□□ 1.51
SPSB3-210ENST00000568416 GRAPQ13588 217 aa24.51■■□□□ 1.51
SPSB3-210ENST00000568416 DDX46Q7L014 1031 aaKnown RBP24.51■■□□□ 1.51
SPSB3-210ENST00000568416 GRAPLQ8TC17 118 aaPredicted RBP24.51■■□□□ 1.51
SPSB3-210ENST00000568416 ZNF428Q96B54 188 aa24.51■■□□□ 1.51
SPSB3-210ENST00000568416 RTFDC1Q9BY42 306 aaPredicted RBP24.51■■□□□ 1.51
SPSB3-210ENST00000568416 VPS33BQ9H267 617 aa24.51■■□□□ 1.51
SPSB3-210ENST00000568416 TRIM28Q13263 835 aaKnown RBP24.5■■□□□ 1.51
SPSB3-210ENST00000568416 C8orf58Q8NAV2 365 aa24.5■■□□□ 1.51
SPSB3-210ENST00000568416 PHAXQ9H814 394 aaKnown RBP24.5■■□□□ 1.51
SPSB3-210ENST00000568416 PPIP5K2O43314 1243 aa24.49■■□□□ 1.51
SPSB3-210ENST00000568416 EAPPQ56P03 285 aaPredicted RBP24.49■■□□□ 1.51
SPSB3-210ENST00000568416 SUPT20HQ8NEM7 779 aa24.49■■□□□ 1.51
SPSB3-210ENST00000568416 FAM89AQ96GI7 184 aa24.49■■□□□ 1.51
SPSB3-210ENST00000568416 PASKQ96RG2 1323 aa24.49■■□□□ 1.51
SPSB3-210ENST00000568416 ADAMTSL1Q8N6G6 1762 aa24.49■■□□□ 1.51
SPSB3-210ENST00000568416 AOC3Q16853 763 aa24.48■■□□□ 1.51
SPSB3-210ENST00000568416 IFFO2Q5TF58 517 aa24.48■■□□□ 1.51
SPSB3-210ENST00000568416 PNMA8AQ86V59 439 aaPredicted RBP24.48■■□□□ 1.51
SPSB3-210ENST00000568416 NIM1KQ8IY84 436 aa24.48■■□□□ 1.51
SPSB3-210ENST00000568416 CREBZFQ9NS37 354 aa24.48■■□□□ 1.51
SPSB3-210ENST00000568416 GJA3Q9Y6H8 435 aa24.48■■□□□ 1.51
SPSB3-210ENST00000568416 GOLGA2Q08379 1002 aa24.47■■□□□ 1.51
SPSB3-210ENST00000568416 SF3B3Q15393 1217 aaKnown RBP24.47■■□□□ 1.51
SPSB3-210ENST00000568416 DPP8Q6V1X1 898 aaPredicted RBP24.47■■□□□ 1.51
SPSB3-210ENST00000568416 RIC3Q7Z5B4 369 aa24.47■■□□□ 1.51
SPSB3-210ENST00000568416 DDX60Q8IY21 1712 aaKnown RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms