RNA–Protein interactions for RNA: ENST00000567910.1

ABCA3-205, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-205ENST00000567910 SMC4Q9NTJ3 1288 aa13.64□□□□□ -0.23
ABCA3-205ENST00000567910 CHD4Q14839 1912 aa13.63□□□□□ -0.23
ABCA3-205ENST00000567910 PI4KAP2A4QPH2 592 aa13.63□□□□□ -0.23
ABCA3-205ENST00000567910 IGKV5-2P06315 115 aa13.63□□□□□ -0.23
ABCA3-205ENST00000567910 SRGNP10124 158 aa13.63□□□□□ -0.23
ABCA3-205ENST00000567910 PARP10Q53GL7 1025 aa13.63□□□□□ -0.23
ABCA3-205ENST00000567910 TPTE2Q6XPS3 522 aa13.63□□□□□ -0.23
ABCA3-205ENST00000567910 SLC51AQ86UW1 340 aa13.63□□□□□ -0.23
ABCA3-205ENST00000567910 PI4KAP1Q8N8J0 262 aa13.63□□□□□ -0.23
ABCA3-205ENST00000567910 BCL2L13Q9BXK5 485 aa13.63□□□□□ -0.23
ABCA3-205ENST00000567910 STK31Q9BXU1 1019 aa13.63□□□□□ -0.23
ABCA3-205ENST00000567910 TAF1P21675 1872 aa13.62□□□□□ -0.23
ABCA3-205ENST00000567910 RARSP54136 660 aaKnown RBP13.62□□□□□ -0.23
ABCA3-205ENST00000567910 ST5P78524 1137 aa13.62□□□□□ -0.23
ABCA3-205ENST00000567910 TRIM28Q13263 835 aaKnown RBP13.62□□□□□ -0.23
ABCA3-205ENST00000567910 CRY2Q49AN0 593 aa13.62□□□□□ -0.23
ABCA3-205ENST00000567910 HSP90AB3PQ58FF7 597 aa13.62□□□□□ -0.23
ABCA3-205ENST00000567910 KSR2Q6VAB6 950 aa13.62□□□□□ -0.23
ABCA3-205ENST00000567910 RIC3Q7Z5B4 369 aa13.62□□□□□ -0.23
ABCA3-205ENST00000567910 METTL22Q9BUU2 404 aaPredicted RBP13.62□□□□□ -0.23
ABCA3-205ENST00000567910 BCS1LQ9Y276 419 aa13.62□□□□□ -0.23
ABCA3-205ENST00000567910 MAP3K2Q9Y2U5 619 aa13.62□□□□□ -0.23
ABCA3-205ENST00000567910 PDE6BP35913 854 aa13.61□□□□□ -0.23
ABCA3-205ENST00000567910 ALDH1L2Q3SY69 923 aa13.61□□□□□ -0.23
ABCA3-205ENST00000567910 MRPL50Q8N5N7 158 aaKnown RBP13.61□□□□□ -0.23
ABCA3-205ENST00000567910 SSH1Q8WYL5 1049 aa13.61□□□□□ -0.23
ABCA3-205ENST00000567910 MYD88Q99836 296 aa13.61□□□□□ -0.23
ABCA3-205ENST00000567910 UTP14AQ9BVJ6 771 aaKnown RBP13.61□□□□□ -0.23
ABCA3-205ENST00000567910 NYXQ9GZU5 481 aa13.61□□□□□ -0.23
ABCA3-205ENST00000567910 PIM2Q9P1W9 311 aa13.61□□□□□ -0.23
ABCA3-205ENST00000567910 SUPT16HQ9Y5B9 1047 aaKnown RBP13.61□□□□□ -0.23
ABCA3-205ENST00000567910 F6X3S4 739 aa13.6□□□□□ -0.23
ABCA3-205ENST00000567910 H0YIN7 160 aa13.6□□□□□ -0.23
ABCA3-205ENST00000567910 BCAR3O75815 825 aa13.6□□□□□ -0.23
ABCA3-205ENST00000567910 SLC10A5Q5PT55 438 aa13.6□□□□□ -0.23
ABCA3-205ENST00000567910 PPP1R42Q7Z4L9 355 aa13.6□□□□□ -0.23
ABCA3-205ENST00000567910 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.6□□□□□ -0.23
ABCA3-205ENST00000567910 FER1L6Q2WGJ9 1857 aa13.59□□□□□ -0.23
ABCA3-205ENST00000567910 SNED1Q8TER0 1413 aa13.59□□□□□ -0.23
ABCA3-205ENST00000567910 HCLS1P14317 486 aaPredicted RBP13.59□□□□□ -0.23
ABCA3-205ENST00000567910 PRELPP51888 382 aa13.59□□□□□ -0.23
ABCA3-205ENST00000567910 CWF19L2Q2TBE0 894 aaKnown RBP13.59□□□□□ -0.23
ABCA3-205ENST00000567910 DALRD3Q5D0E6 543 aaKnown RBP13.59□□□□□ -0.23
ABCA3-205ENST00000567910 JARID2Q92833 1246 aaPredicted RBP13.59□□□□□ -0.23
ABCA3-205ENST00000567910 FRAT1Q92837 279 aaPredicted RBP13.59□□□□□ -0.23
ABCA3-205ENST00000567910 FAM89AQ96GI7 184 aa13.59□□□□□ -0.23
ABCA3-205ENST00000567910 RNF123Q5XPI4 1314 aa13.59□□□□□ -0.23
ABCA3-205ENST00000567910 KIF16BQ96L93 1317 aa13.59□□□□□ -0.23
ABCA3-205ENST00000567910 SBF1O95248 1867 aa13.59□□□□□ -0.23
ABCA3-205ENST00000567910 NEURL1BA8MQ27 555 aa13.58□□□□□ -0.24
ABCA3-205ENST00000567910 NPHP1O15259 732 aa13.58□□□□□ -0.24
ABCA3-205ENST00000567910 DDX58O95786 925 aaKnown RBP13.58□□□□□ -0.24
ABCA3-205ENST00000567910 NEFLP07196 543 aa13.58□□□□□ -0.24
ABCA3-205ENST00000567910 FKBP5Q13451 457 aaPredicted RBP13.58□□□□□ -0.24
ABCA3-205ENST00000567910 RTL5Q5HYW3 569 aaPredicted RBP13.58□□□□□ -0.24
ABCA3-205ENST00000567910 STYK1Q6J9G0 422 aa13.58□□□□□ -0.24
ABCA3-205ENST00000567910 TTLL6Q8N841 843 aa13.58□□□□□ -0.24
ABCA3-205ENST00000567910 C7orf43Q8WVR3 580 aa13.58□□□□□ -0.24
ABCA3-205ENST00000567910 ZNF622Q969S3 477 aaKnown RBP eCLIP13.58□□□□□ -0.24
ABCA3-205ENST00000567910 MASTLQ96GX5 879 aa13.58□□□□□ -0.24
ABCA3-205ENST00000567910 TRMT112Q9UI30 125 aaKnown RBP13.58□□□□□ -0.24
ABCA3-205ENST00000567910 SH3TC1Q8TE82 1336 aa13.58□□□□□ -0.24
ABCA3-205ENST00000567910 GRIN3BO60391 1043 aa13.57□□□□□ -0.24
ABCA3-205ENST00000567910 NPR1P16066 1061 aa13.57□□□□□ -0.24
ABCA3-205ENST00000567910 GTF2E1P29083 439 aaPredicted RBP13.57□□□□□ -0.24
ABCA3-205ENST00000567910 RRP1P56182 461 aaKnown RBP13.57□□□□□ -0.24
ABCA3-205ENST00000567910 PRPF40BQ6NWY9 871 aaKnown RBP13.57□□□□□ -0.24
ABCA3-205ENST00000567910 OLFM4Q6UX06 510 aa13.57□□□□□ -0.24
ABCA3-205ENST00000567910 CCDC191Q8NCU4 936 aa13.57□□□□□ -0.24
ABCA3-205ENST00000567910 DNAAF4Q8WXU2 420 aa13.57□□□□□ -0.24
ABCA3-205ENST00000567910 HOXA10P31260 410 aaPredicted RBP13.56□□□□□ -0.24
ABCA3-205ENST00000567910 BEND3Q5T5X7 828 aa13.56□□□□□ -0.24
ABCA3-205ENST00000567910 ZBTB38Q8NAP3 1195 aaPredicted RBP13.56□□□□□ -0.24
ABCA3-205ENST00000567910 PDZRN3Q9UPQ7 1066 aa13.56□□□□□ -0.24
ABCA3-205ENST00000567910 MYH3P11055 1940 aa13.55□□□□□ -0.24
ABCA3-205ENST00000567910 NFKBIEO00221 500 aa13.55□□□□□ -0.24
ABCA3-205ENST00000567910 IPO8O15397 1037 aaKnown RBP13.55□□□□□ -0.24
ABCA3-205ENST00000567910 PCCAP05165 728 aaPredicted RBP13.55□□□□□ -0.24
ABCA3-205ENST00000567910 CASP7P55210 303 aa13.55□□□□□ -0.24
ABCA3-205ENST00000567910 RASSF7Q02833 373 aa13.55□□□□□ -0.24
ABCA3-205ENST00000567910 CWC25Q9NXE8 425 aaPredicted RBP13.55□□□□□ -0.24
ABCA3-205ENST00000567910 CCDC88AQ3V6T2 1871 aa13.55□□□□□ -0.24
ABCA3-205ENST00000567910 IRS4O14654 1257 aaPredicted RBP13.54□□□□□ -0.24
ABCA3-205ENST00000567910 C21orf2O43822 256 aa13.54□□□□□ -0.24
ABCA3-205ENST00000567910 PLIN1O60240 522 aa13.54□□□□□ -0.24
ABCA3-205ENST00000567910 GCKRQ14397 625 aa13.54□□□□□ -0.24
ABCA3-205ENST00000567910 ZKSCAN2Q63HK3 967 aa13.54□□□□□ -0.24
ABCA3-205ENST00000567910 LINS1Q8NG48 757 aa13.54□□□□□ -0.24
ABCA3-205ENST00000567910 ZNF219Q9P2Y4 722 aaPredicted RBP13.54□□□□□ -0.24
ABCA3-205ENST00000567910 NOB1Q9ULX3 412 aaKnown RBP13.54□□□□□ -0.24
ABCA3-205ENST00000567910 ABCC4O15439 1325 aa13.54□□□□□ -0.24
ABCA3-205ENST00000567910 LRRC37AA6NMS7 1700 aa13.53□□□□□ -0.24
ABCA3-205ENST00000567910 DCAF8L1A6NGE4 600 aa13.53□□□□□ -0.24
ABCA3-205ENST00000567910 H7C1W4 665 aa13.53□□□□□ -0.24
ABCA3-205ENST00000567910 BRPF1P55201 1214 aaPredicted RBP13.53□□□□□ -0.24
ABCA3-205ENST00000567910 ARHGAP27Q6ZUM4 889 aa13.53□□□□□ -0.24
ABCA3-205ENST00000567910 FTSJ3Q8IY81 847 aaKnown RBP13.53□□□□□ -0.24
ABCA3-205ENST00000567910 CNKSR1Q969H4 720 aa13.53□□□□□ -0.24
ABCA3-205ENST00000567910 NLRP3Q96P20 1036 aa13.53□□□□□ -0.24
ABCA3-205ENST00000567910 MS4A1P11836 297 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms