RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 SNRPA1P09661 255 aaKnown RBP13.7□□□□□ -0.22
LINC00564-201ENST00000567258 EIF5P55010 431 aaKnown RBP13.7□□□□□ -0.22
LINC00564-201ENST00000567258 NFIXQ14938 502 aa13.7□□□□□ -0.22
LINC00564-201ENST00000567258 RALBP1Q15311 655 aa13.7□□□□□ -0.22
LINC00564-201ENST00000567258 STK24Q9Y6E0 443 aa13.7□□□□□ -0.22
LINC00564-201ENST00000567258 SENP3-EIF4A1A0A087X0R7 540 aa13.69□□□□□ -0.22
LINC00564-201ENST00000567258 LSM11P83369 360 aaKnown RBP eCLIP13.69□□□□□ -0.22
LINC00564-201ENST00000567258 TAF7Q15545 349 aaPredicted RBP13.69□□□□□ -0.22
LINC00564-201ENST00000567258 PNISRQ8TF01 805 aaKnown RBP13.69□□□□□ -0.22
LINC00564-201ENST00000567258 TBC1D2BQ9UPU7 963 aa13.69□□□□□ -0.22
LINC00564-201ENST00000567258 NRXN2Q9P2S2 1712 aa13.68□□□□□ -0.22
LINC00564-201ENST00000567258 A1BGP04217 495 aa13.68□□□□□ -0.22
LINC00564-201ENST00000567258 DDX10Q13206 875 aaKnown RBP13.68□□□□□ -0.22
LINC00564-201ENST00000567258 DCTN1Q14203 1278 aa13.68□□□□□ -0.22
LINC00564-201ENST00000567258 TAOK2Q9UL54 1235 aa13.68□□□□□ -0.22
LINC00564-201ENST00000567258 SCN7AQ01118 1682 aa13.68□□□□□ -0.22
LINC00564-201ENST00000567258 H0YIN7 160 aa13.67□□□□□ -0.22
LINC00564-201ENST00000567258 KCNQ3O43525 872 aa13.67□□□□□ -0.22
LINC00564-201ENST00000567258 KCNA3P22001 575 aa13.67□□□□□ -0.22
LINC00564-201ENST00000567258 CHRNA5P30532 468 aa13.67□□□□□ -0.22
LINC00564-201ENST00000567258 DZIP3Q86Y13 1208 aaKnown RBP13.67□□□□□ -0.22
LINC00564-201ENST00000567258 SETDB2Q96T68 719 aa13.67□□□□□ -0.22
LINC00564-201ENST00000567258 MFRPQ9BY79 579 aa13.67□□□□□ -0.22
LINC00564-201ENST00000567258 ZNF652Q9Y2D9 606 aa13.67□□□□□ -0.22
LINC00564-201ENST00000567258 DLEC1Q9Y238 1755 aa13.67□□□□□ -0.22
LINC00564-201ENST00000567258 CCDC88AQ3V6T2 1871 aa13.67□□□□□ -0.22
LINC00564-201ENST00000567258 SBF1O95248 1867 aa13.66□□□□□ -0.22
LINC00564-201ENST00000567258 NFE2L2Q16236 605 aa13.66□□□□□ -0.22
LINC00564-201ENST00000567258 BCL2L12Q9HB09 334 aa13.66□□□□□ -0.22
LINC00564-201ENST00000567258 PDZRN3Q9UPQ7 1066 aa13.66□□□□□ -0.22
LINC00564-201ENST00000567258 USP16Q9Y5T5 823 aa13.66□□□□□ -0.22
LINC00564-201ENST00000567258 ADCY9O60503 1353 aa13.66□□□□□ -0.22
LINC00564-201ENST00000567258 CARMIL3Q8ND23 1372 aa13.66□□□□□ -0.22
LINC00564-201ENST00000567258 LAMB4A4D0S4 1761 aa13.66□□□□□ -0.22
LINC00564-201ENST00000567258 BCORQ6W2J9 1755 aa13.66□□□□□ -0.22
LINC00564-201ENST00000567258 C2orf72A6NCS6 295 aa13.65□□□□□ -0.22
LINC00564-201ENST00000567258 KIF3CO14782 793 aa13.65□□□□□ -0.22
LINC00564-201ENST00000567258 PDE6BP35913 854 aa13.65□□□□□ -0.22
LINC00564-201ENST00000567258 TBC1D9BQ66K14 1250 aa13.65□□□□□ -0.22
LINC00564-201ENST00000567258 C2CD5Q86YS7 1000 aa13.65□□□□□ -0.22
LINC00564-201ENST00000567258 CACNA1SQ13698 1873 aa13.65□□□□□ -0.22
LINC00564-201ENST00000567258 KDM3BQ7LBC6 1761 aa13.64□□□□□ -0.23
LINC00564-201ENST00000567258 NUDT7P0C024 238 aa13.64□□□□□ -0.23
LINC00564-201ENST00000567258 ST5P78524 1137 aa13.64□□□□□ -0.23
LINC00564-201ENST00000567258 TTLL6Q8N841 843 aa13.64□□□□□ -0.23
LINC00564-201ENST00000567258 LMOD3Q0VAK6 560 aa13.63□□□□□ -0.23
LINC00564-201ENST00000567258 WDR43Q15061 677 aaKnown RBP eCLIP13.63□□□□□ -0.23
LINC00564-201ENST00000567258 C9orf131Q5VYM1 1079 aa13.63□□□□□ -0.23
LINC00564-201ENST00000567258 CNBD1Q8NA66 436 aa13.63□□□□□ -0.23
LINC00564-201ENST00000567258 ZNF622Q969S3 477 aaKnown RBP eCLIP13.63□□□□□ -0.23
LINC00564-201ENST00000567258 PLEKHF1Q96S99 279 aa13.63□□□□□ -0.23
LINC00564-201ENST00000567258 MIS18AQ9NYP9 233 aa13.63□□□□□ -0.23
LINC00564-201ENST00000567258 ANKRD31Q8N7Z5 1873 aa13.63□□□□□ -0.23
LINC00564-201ENST00000567258 MYBBP1AQ9BQG0 1328 aaKnown RBP13.63□□□□□ -0.23
LINC00564-201ENST00000567258 PIP4K2AP48426 406 aaPredicted RBP13.62□□□□□ -0.23
LINC00564-201ENST00000567258 CLEC4GQ6UXB4 293 aa13.62□□□□□ -0.23
LINC00564-201ENST00000567258 BRIP1Q9BX63 1249 aa13.62□□□□□ -0.23
LINC00564-201ENST00000567258 RNF181Q9P0P0 153 aa13.62□□□□□ -0.23
LINC00564-201ENST00000567258 PRAMEF22A3QJZ6 481 aa13.61□□□□□ -0.23
LINC00564-201ENST00000567258 CAMTA2O94983 1202 aa13.61□□□□□ -0.23
LINC00564-201ENST00000567258 RIPK4P57078 832 aa13.61□□□□□ -0.23
LINC00564-201ENST00000567258 NBPF5PQ86XG9 351 aaPredicted RBP13.61□□□□□ -0.23
LINC00564-201ENST00000567258 C16orf71Q8IYS4 520 aaPredicted RBP13.61□□□□□ -0.23
LINC00564-201ENST00000567258 NUP98P52948 1817 aa13.61□□□□□ -0.23
LINC00564-201ENST00000567258 KDM2BQ8NHM5 1336 aa13.61□□□□□ -0.23
LINC00564-201ENST00000567258 STK25O00506 426 aa13.6□□□□□ -0.23
LINC00564-201ENST00000567258 GTF2E1P29083 439 aaPredicted RBP13.6□□□□□ -0.23
LINC00564-201ENST00000567258 PRR5LQ6MZQ0 368 aa13.6□□□□□ -0.23
LINC00564-201ENST00000567258 PBX2P40425 430 aa13.59□□□□□ -0.23
LINC00564-201ENST00000567258 TPTE2Q6XPS3 522 aa13.59□□□□□ -0.23
LINC00564-201ENST00000567258 KIF6Q6ZMV9 814 aa13.59□□□□□ -0.23
LINC00564-201ENST00000567258 NGEFQ8N5V2 710 aa13.59□□□□□ -0.23
LINC00564-201ENST00000567258 TSPYL4Q9UJ04 414 aa13.59□□□□□ -0.23
LINC00564-201ENST00000567258 LHX6Q9UPM6 363 aa13.59□□□□□ -0.23
LINC00564-201ENST00000567258 NIP7Q9Y221 180 aaKnown RBP eCLIP13.59□□□□□ -0.23
LINC00564-201ENST00000567258 RRP7AQ9Y3A4 280 aaKnown RBP13.59□□□□□ -0.23
LINC00564-201ENST00000567258 RGL2O15211 777 aa13.58□□□□□ -0.24
LINC00564-201ENST00000567258 EIF4A1P60842 406 aaKnown RBP13.58□□□□□ -0.24
LINC00564-201ENST00000567258 NEUROD2Q15784 382 aa13.58□□□□□ -0.24
LINC00564-201ENST00000567258 CCDC24Q8N4L8 307 aa13.58□□□□□ -0.24
LINC00564-201ENST00000567258 CNKSR1Q969H4 720 aa13.58□□□□□ -0.24
LINC00564-201ENST00000567258 THUMPD2Q9BTF0 503 aaKnown RBP13.58□□□□□ -0.24
LINC00564-201ENST00000567258 DICER1Q9UPY3 1922 aaKnown RBP13.58□□□□□ -0.24
LINC00564-201ENST00000567258 TNRC6CQ9HCJ0 1690 aaKnown RBP13.57□□□□□ -0.24
LINC00564-201ENST00000567258 COL11A2P13942 1736 aaPredicted RBP13.57□□□□□ -0.24
LINC00564-201ENST00000567258 NBPF26B4DH59 902 aa13.57□□□□□ -0.24
LINC00564-201ENST00000567258 LMNB1P20700 586 aa13.57□□□□□ -0.24
LINC00564-201ENST00000567258 NBPF10Q6P3W6 841 aaKnown RBP13.57□□□□□ -0.24
LINC00564-201ENST00000567258 NBPF15Q8N660 670 aa13.57□□□□□ -0.24
LINC00564-201ENST00000567258 PCDHGA4Q9Y5G9 962 aa13.57□□□□□ -0.24
LINC00564-201ENST00000567258 ARFGEF2Q9Y6D5 1785 aa13.57□□□□□ -0.24
LINC00564-201ENST00000567258 FAM177BA6PVY3 158 aa13.56□□□□□ -0.24
LINC00564-201ENST00000567258 TOMM70O94826 608 aa13.56□□□□□ -0.24
LINC00564-201ENST00000567258 MYL6BP14649 208 aa13.56□□□□□ -0.24
LINC00564-201ENST00000567258 TMPOP42166 694 aaKnown RBP13.56□□□□□ -0.24
LINC00564-201ENST00000567258 RASSF7Q02833 373 aa13.56□□□□□ -0.24
LINC00564-201ENST00000567258 SOGA3Q5TF21 947 aa13.56□□□□□ -0.24
LINC00564-201ENST00000567258 STYK1Q6J9G0 422 aa13.56□□□□□ -0.24
LINC00564-201ENST00000567258 POTEEQ6S8J3 1075 aa13.56□□□□□ -0.24
LINC00564-201ENST00000567258 RUNDC1Q96C34 613 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms