RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 ELL2O00472 640 aaPredicted RBP19.05■□□□□ 0.64
FANCA-220ENST00000566409 ANP32CO43423 234 aa19.05■□□□□ 0.64
FANCA-220ENST00000566409 ALDH1B1P30837 517 aa19.05■□□□□ 0.64
FANCA-220ENST00000566409 TCIRG1Q13488 830 aa19.05■□□□□ 0.64
FANCA-220ENST00000566409 SLC10A5Q5PT55 438 aa19.05■□□□□ 0.64
FANCA-220ENST00000566409 SOGA3Q5TF21 947 aa19.05■□□□□ 0.64
FANCA-220ENST00000566409 PPP1R42Q7Z4L9 355 aa19.05■□□□□ 0.64
FANCA-220ENST00000566409 NLRP10Q86W26 655 aa19.05■□□□□ 0.64
FANCA-220ENST00000566409 SYNE4Q8N205 404 aa19.05■□□□□ 0.64
FANCA-220ENST00000566409 C8orf58Q8NAV2 365 aa19.05■□□□□ 0.64
FANCA-220ENST00000566409 MRS2Q9HD23 443 aa19.05■□□□□ 0.64
FANCA-220ENST00000566409 DBF4Q9UBU7 674 aaPredicted RBP19.05■□□□□ 0.64
FANCA-220ENST00000566409 LAMB2P55268 1798 aa19.05■□□□□ 0.64
FANCA-220ENST00000566409 CALD1Q05682 793 aaKnown RBP19.04■□□□□ 0.64
FANCA-220ENST00000566409 SLC51AQ86UW1 340 aa19.04■□□□□ 0.64
FANCA-220ENST00000566409 SNED1Q8TER0 1413 aa19.04■□□□□ 0.64
FANCA-220ENST00000566409 UTP14AQ9BVJ6 771 aaKnown RBP19.04■□□□□ 0.64
FANCA-220ENST00000566409 HSPA6P17066 643 aa19.03■□□□□ 0.64
FANCA-220ENST00000566409 CCDC93Q567U6 631 aa19.03■□□□□ 0.64
FANCA-220ENST00000566409 POTECB2RU33 542 aa19.02■□□□□ 0.64
FANCA-220ENST00000566409 CCDC27Q2M243 656 aa19.02■□□□□ 0.64
FANCA-220ENST00000566409 HSP90AB3PQ58FF7 597 aa19.02■□□□□ 0.64
FANCA-220ENST00000566409 ANKRD13DQ6ZTN6 518 aa19.02■□□□□ 0.64
FANCA-220ENST00000566409 WWC1Q8IX03 1113 aa19.02■□□□□ 0.64
FANCA-220ENST00000566409 PLBD2Q8NHP8 589 aa19.02■□□□□ 0.64
FANCA-220ENST00000566409 ZNF428Q96B54 188 aa19.02■□□□□ 0.64
FANCA-220ENST00000566409 HYPKQ9NX55 129 aa19.02■□□□□ 0.64
FANCA-220ENST00000566409 TSPYL6Q8N831 410 aa19.01■□□□□ 0.63
FANCA-220ENST00000566409 RPGRQ92834 1020 aaKnown RBP19.01■□□□□ 0.63
FANCA-220ENST00000566409 PHAXQ9H814 394 aaKnown RBP19.01■□□□□ 0.63
FANCA-220ENST00000566409 TAF1P21675 1872 aa19.01■□□□□ 0.63
FANCA-220ENST00000566409 WDR90Q96KV7 1748 aa19■□□□□ 0.63
FANCA-220ENST00000566409 HCLS1P14317 486 aaPredicted RBP19■□□□□ 0.63
FANCA-220ENST00000566409 FKBP4Q02790 459 aaKnown RBP eCLIP19■□□□□ 0.63
FANCA-220ENST00000566409 RBM46Q8TBY0 533 aaKnown RBP19■□□□□ 0.63
FANCA-220ENST00000566409 TSR2Q969E8 191 aaKnown RBP19■□□□□ 0.63
FANCA-220ENST00000566409 NLRP3Q96P20 1036 aa19■□□□□ 0.63
FANCA-220ENST00000566409 CRAMP1Q96RY5 1269 aa19■□□□□ 0.63
FANCA-220ENST00000566409 ISCA1Q9BUE6 129 aa19■□□□□ 0.63
FANCA-220ENST00000566409 ZNF277Q9NRM2 450 aaPredicted RBP19■□□□□ 0.63
FANCA-220ENST00000566409 RTKN2Q8IZC4 609 aa18.99■□□□□ 0.63
FANCA-220ENST00000566409 RBM17Q96I25 401 aaKnown RBP18.99■□□□□ 0.63
FANCA-220ENST00000566409 TRMT112Q9UI30 125 aaKnown RBP18.99■□□□□ 0.63
FANCA-220ENST00000566409 DDX60Q8IY21 1712 aaKnown RBP18.99■□□□□ 0.63
FANCA-220ENST00000566409 RNF123Q5XPI4 1314 aa18.99■□□□□ 0.63
FANCA-220ENST00000566409 ATP5J2-PTCD1G3V325 749 aa18.98■□□□□ 0.63
FANCA-220ENST00000566409 VEGFAP15692 232 aaPredicted RBP18.98■□□□□ 0.63
FANCA-220ENST00000566409 NCBP3Q53F19 620 aaKnown RBP18.97■□□□□ 0.63
FANCA-220ENST00000566409 DPY19L2Q6NUT2 758 aa18.97■□□□□ 0.63
FANCA-220ENST00000566409 SH3TC1Q8TE82 1336 aa18.97■□□□□ 0.63
FANCA-220ENST00000566409 COL4A5P29400 1685 aa18.96■□□□□ 0.63
FANCA-220ENST00000566409 TCERG1O14776 1098 aaKnown RBP18.96■□□□□ 0.63
FANCA-220ENST00000566409 DDNO94850 711 aaPredicted RBP18.96■□□□□ 0.63
FANCA-220ENST00000566409 C16orf71Q8IYS4 520 aaPredicted RBP18.96■□□□□ 0.63
FANCA-220ENST00000566409 PSMD1Q99460 953 aa18.96■□□□□ 0.63
FANCA-220ENST00000566409 ABCC4O15439 1325 aa18.96■□□□□ 0.63
FANCA-220ENST00000566409 PPEF1O14829 653 aaPredicted RBP18.95■□□□□ 0.62
FANCA-220ENST00000566409 TRIM28Q13263 835 aaKnown RBP18.95■□□□□ 0.62
FANCA-220ENST00000566409 CC2D2BQ6DHV5 1058 aa18.95■□□□□ 0.62
FANCA-220ENST00000566409 IL16Q14005 1332 aa18.95■□□□□ 0.62
FANCA-220ENST00000566409 IARSP41252 1262 aaKnown RBP18.94■□□□□ 0.62
FANCA-220ENST00000566409 FAM89AQ96GI7 184 aa18.94■□□□□ 0.62
FANCA-220ENST00000566409 SALL2Q9Y467 1007 aaPredicted RBP18.94■□□□□ 0.62
FANCA-220ENST00000566409 FSTL1Q12841 308 aa18.93■□□□□ 0.62
FANCA-220ENST00000566409 CCDC30Q5VVM6 783 aa18.93■□□□□ 0.62
FANCA-220ENST00000566409 RIC3Q7Z5B4 369 aa18.93■□□□□ 0.62
FANCA-220ENST00000566409 ATP6V0A2Q9Y487 856 aa18.93■□□□□ 0.62
FANCA-220ENST00000566409 ZNF541Q9H0D2 1346 aa18.93■□□□□ 0.62
FANCA-220ENST00000566409 COL4A1P02462 1669 aa18.92■□□□□ 0.62
FANCA-220ENST00000566409 FZD9O00144 591 aa18.92■□□□□ 0.62
FANCA-220ENST00000566409 GOLGA2Q08379 1002 aa18.92■□□□□ 0.62
FANCA-220ENST00000566409 APLP1P51693 650 aa18.91■□□□□ 0.62
FANCA-220ENST00000566409 RTL5Q5HYW3 569 aaPredicted RBP18.91■□□□□ 0.62
FANCA-220ENST00000566409 FAM9BQ8IZU0 186 aa18.91■□□□□ 0.62
FANCA-220ENST00000566409 SPINK5Q9NQ38 1064 aaPredicted RBP18.91■□□□□ 0.62
FANCA-220ENST00000566409 SCN4AP35499 1836 aa18.9■□□□□ 0.62
FANCA-220ENST00000566409 BBOX1O75936 387 aa18.9■□□□□ 0.62
FANCA-220ENST00000566409 TWISTNBQ3B726 338 aaPredicted RBP18.9■□□□□ 0.62
FANCA-220ENST00000566409 GRIPAP1Q4V328 841 aa18.9■□□□□ 0.62
FANCA-220ENST00000566409 WDR63Q8IWG1 891 aa18.9■□□□□ 0.62
FANCA-220ENST00000566409 SMC1BQ8NDV3 1235 aa18.9■□□□□ 0.62
FANCA-220ENST00000566409 L3MBTL3Q96JM7 780 aaPredicted RBP18.9■□□□□ 0.62
FANCA-220ENST00000566409 MYD88Q99836 296 aa18.9■□□□□ 0.62
FANCA-220ENST00000566409 FANCIQ9NVI1 1328 aa18.9■□□□□ 0.62
FANCA-220ENST00000566409 POTEIP0CG38 1075 aa18.89■□□□□ 0.61
FANCA-220ENST00000566409 POTEJP0CG39 1038 aa18.89■□□□□ 0.61
FANCA-220ENST00000566409 HTRA3P83110 453 aa18.89■□□□□ 0.61
FANCA-220ENST00000566409 SF3B3Q15393 1217 aaKnown RBP18.89■□□□□ 0.61
FANCA-220ENST00000566409 DDX46Q7L014 1031 aaKnown RBP18.89■□□□□ 0.61
FANCA-220ENST00000566409 G2E3Q7L622 706 aa18.89■□□□□ 0.61
FANCA-220ENST00000566409 SP8Q8IXZ3 490 aa18.89■□□□□ 0.61
FANCA-220ENST00000566409 DNAJC5GQ8N7S2 189 aa18.89■□□□□ 0.61
FANCA-220ENST00000566409 METTL22Q9BUU2 404 aaPredicted RBP18.89■□□□□ 0.61
FANCA-220ENST00000566409 IRS4O14654 1257 aaPredicted RBP18.88■□□□□ 0.61
FANCA-220ENST00000566409 GRAPQ13588 217 aa18.88■□□□□ 0.61
FANCA-220ENST00000566409 GRAPLQ8TC17 118 aaPredicted RBP18.88■□□□□ 0.61
FANCA-220ENST00000566409 LRRC37AA6NMS7 1700 aa18.88■□□□□ 0.61
FANCA-220ENST00000566409 CACNA1FO60840 1977 aa18.87■□□□□ 0.61
FANCA-220ENST00000566409 PCNTO95613 3336 aa18.87■□□□□ 0.61
FANCA-220ENST00000566409 ZBTB38Q8NAP3 1195 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms