RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 CHMP4AQ9BY43 222 aa19.8■□□□□ 0.76
CMTM3-212ENST00000566121 ABCC12Q96J65 1359 aa19.8■□□□□ 0.76
CMTM3-212ENST00000566121 TCIRG1Q13488 830 aa19.79■□□□□ 0.76
CMTM3-212ENST00000566121 PROSER3Q2NL68 480 aa19.79■□□□□ 0.76
CMTM3-212ENST00000566121 COPS6Q7L5N1 327 aa19.79■□□□□ 0.76
CMTM3-212ENST00000566121 NUTM1Q86Y26 1132 aa19.79■□□□□ 0.76
CMTM3-212ENST00000566121 UTP14AQ9BVJ6 771 aaKnown RBP19.79■□□□□ 0.76
CMTM3-212ENST00000566121 VPS33BQ9H267 617 aa19.79■□□□□ 0.76
CMTM3-212ENST00000566121 NEUROD2Q15784 382 aa19.78■□□□□ 0.76
CMTM3-212ENST00000566121 RBM17Q96I25 401 aaKnown RBP19.78■□□□□ 0.76
CMTM3-212ENST00000566121 NLRP3Q96P20 1036 aa19.78■□□□□ 0.76
CMTM3-212ENST00000566121 IFT57Q9NWB7 429 aa19.78■□□□□ 0.76
CMTM3-212ENST00000566121 ZNF219Q9P2Y4 722 aaPredicted RBP19.78■□□□□ 0.76
CMTM3-212ENST00000566121 DBF4Q9UBU7 674 aaPredicted RBP19.78■□□□□ 0.76
CMTM3-212ENST00000566121 TIAM2Q8IVF5 1701 aa19.78■□□□□ 0.76
CMTM3-212ENST00000566121 FAM177BA6PVY3 158 aa19.77■□□□□ 0.76
CMTM3-212ENST00000566121 FZD9O00144 591 aa19.77■□□□□ 0.76
CMTM3-212ENST00000566121 GPTP24298 496 aa19.77■□□□□ 0.76
CMTM3-212ENST00000566121 TRIM28Q13263 835 aaKnown RBP19.77■□□□□ 0.76
CMTM3-212ENST00000566121 IQCA1LA6NCM1 817 aa19.76■□□□□ 0.75
CMTM3-212ENST00000566121 GNAI1P63096 354 aa19.76■□□□□ 0.75
CMTM3-212ENST00000566121 NLRP10Q86W26 655 aa19.76■□□□□ 0.75
CMTM3-212ENST00000566121 XAGE3Q8WTP9 111 aa19.76■□□□□ 0.75
CMTM3-212ENST00000566121 RPGRQ92834 1020 aaKnown RBP19.76■□□□□ 0.75
CMTM3-212ENST00000566121 HYPKQ9NX55 129 aa19.76■□□□□ 0.75
CMTM3-212ENST00000566121 BBOX1O75936 387 aa19.75■□□□□ 0.75
CMTM3-212ENST00000566121 SYNE4Q8N205 404 aa19.75■□□□□ 0.75
CMTM3-212ENST00000566121 PLBD2Q8NHP8 589 aa19.75■□□□□ 0.75
CMTM3-212ENST00000566121 PCNTO95613 3336 aa19.75■□□□□ 0.75
CMTM3-212ENST00000566121 IARSP41252 1262 aaKnown RBP19.74■□□□□ 0.75
CMTM3-212ENST00000566121 CCDC27Q2M243 656 aa19.74■□□□□ 0.75
CMTM3-212ENST00000566121 HDGFL1Q5TGJ6 251 aa19.74■□□□□ 0.75
CMTM3-212ENST00000566121 ANKRD13DQ6ZTN6 518 aa19.74■□□□□ 0.75
CMTM3-212ENST00000566121 JMYQ8N9B5 988 aa19.74■□□□□ 0.75
CMTM3-212ENST00000566121 APAF1O14727 1248 aa19.73■□□□□ 0.75
CMTM3-212ENST00000566121 DDNO94850 711 aaPredicted RBP19.73■□□□□ 0.75
CMTM3-212ENST00000566121 ISCA1Q9BUE6 129 aa19.73■□□□□ 0.75
CMTM3-212ENST00000566121 MBIPQ9NS73 344 aa19.73■□□□□ 0.75
CMTM3-212ENST00000566121 ANXA1P04083 346 aa19.72■□□□□ 0.75
CMTM3-212ENST00000566121 DUSP27Q5VZP5 1158 aa19.72■□□□□ 0.75
CMTM3-212ENST00000566121 TMC4Q7Z404 712 aa19.72■□□□□ 0.75
CMTM3-212ENST00000566121 KLRG1Q96E93 195 aa19.72■□□□□ 0.75
CMTM3-212ENST00000566121 RTFDC1Q9BY42 306 aaPredicted RBP19.72■□□□□ 0.75
CMTM3-212ENST00000566121 ZNF277Q9NRM2 450 aaPredicted RBP19.72■□□□□ 0.75
CMTM3-212ENST00000566121 CHPF2Q9P2E5 772 aa19.72■□□□□ 0.75
CMTM3-212ENST00000566121 ATP6V0A2Q9Y487 856 aa19.72■□□□□ 0.75
CMTM3-212ENST00000566121 SCN4AP35499 1836 aa19.72■□□□□ 0.75
CMTM3-212ENST00000566121 KRT24Q2M2I5 525 aa19.71■□□□□ 0.75
CMTM3-212ENST00000566121 CHADLQ6NUI6 762 aa19.71■□□□□ 0.75
CMTM3-212ENST00000566121 GPC2Q8N158 579 aa19.71■□□□□ 0.75
CMTM3-212ENST00000566121 SH3TC1Q8TE82 1336 aa19.71■□□□□ 0.75
CMTM3-212ENST00000566121 OLFM4Q6UX06 510 aa19.7■□□□□ 0.74
CMTM3-212ENST00000566121 SP8Q8IXZ3 490 aa19.7■□□□□ 0.74
CMTM3-212ENST00000566121 JDP2Q8WYK2 163 aa19.7■□□□□ 0.74
CMTM3-212ENST00000566121 LAS1LQ9Y4W2 734 aaKnown RBP19.7■□□□□ 0.74
CMTM3-212ENST00000566121 CACNA1SQ13698 1873 aa19.7■□□□□ 0.74
CMTM3-212ENST00000566121 PPEF1O14829 653 aaPredicted RBP19.69■□□□□ 0.74
CMTM3-212ENST00000566121 AIMP1Q12904 312 aaKnown RBP19.69■□□□□ 0.74
CMTM3-212ENST00000566121 C3orf67Q6ZVT6 689 aa19.69■□□□□ 0.74
CMTM3-212ENST00000566121 TMX4Q9H1E5 349 aaPredicted RBP19.69■□□□□ 0.74
CMTM3-212ENST00000566121 TAF1DQ9H5J8 278 aaPredicted RBP19.69■□□□□ 0.74
CMTM3-212ENST00000566121 TRMT112Q9UI30 125 aaKnown RBP19.69■□□□□ 0.74
CMTM3-212ENST00000566121 SF3B3Q15393 1217 aaKnown RBP19.68■□□□□ 0.74
CMTM3-212ENST00000566121 PNMA8AQ86V59 439 aaPredicted RBP19.68■□□□□ 0.74
CMTM3-212ENST00000566121 LDHDQ86WU2 507 aa19.68■□□□□ 0.74
CMTM3-212ENST00000566121 ANKRD36CQ5JPF3 1778 aa19.67■□□□□ 0.74
CMTM3-212ENST00000566121 HSP90B1P14625 803 aaKnown RBP19.67■□□□□ 0.74
CMTM3-212ENST00000566121 SUPT20HQ8NEM7 779 aa19.67■□□□□ 0.74
CMTM3-212ENST00000566121 NECTIN2Q92692 538 aa19.67■□□□□ 0.74
CMTM3-212ENST00000566121 ABCC4O15439 1325 aa19.67■□□□□ 0.74
CMTM3-212ENST00000566121 HACL1Q9UJ83 578 aa19.66■□□□□ 0.74
CMTM3-212ENST00000566121 IL16Q14005 1332 aa19.66■□□□□ 0.74
CMTM3-212ENST00000566121 EIF6P56537 245 aaKnown RBP19.65■□□□□ 0.74
CMTM3-212ENST00000566121 GRAPQ13588 217 aa19.65■□□□□ 0.74
CMTM3-212ENST00000566121 DDX46Q7L014 1031 aaKnown RBP19.65■□□□□ 0.74
CMTM3-212ENST00000566121 GRAPLQ8TC17 118 aaPredicted RBP19.65■□□□□ 0.74
CMTM3-212ENST00000566121 ZNF541Q9H0D2 1346 aa19.65■□□□□ 0.74
CMTM3-212ENST00000566121 HCLS1P14317 486 aaPredicted RBP19.64■□□□□ 0.73
CMTM3-212ENST00000566121 CREBZFQ9NS37 354 aa19.64■□□□□ 0.73
CMTM3-212ENST00000566121 PASKQ96RG2 1323 aa19.64■□□□□ 0.73
CMTM3-212ENST00000566121 CCDC30Q5VVM6 783 aa19.63■□□□□ 0.73
CMTM3-212ENST00000566121 LARGE2Q8N3Y3 721 aa19.63■□□□□ 0.73
CMTM3-212ENST00000566121 ITGBL1O95965 494 aaPredicted RBP19.62■□□□□ 0.73
CMTM3-212ENST00000566121 EPHX2P34913 555 aa19.62■□□□□ 0.73
CMTM3-212ENST00000566121 C8orf58Q8NAV2 365 aa19.62■□□□□ 0.73
CMTM3-212ENST00000566121 CCDC191Q8NCU4 936 aa19.62■□□□□ 0.73
CMTM3-212ENST00000566121 ZNF316A6NFI3 1004 aaPredicted RBP19.61■□□□□ 0.73
CMTM3-212ENST00000566121 GOLGA2Q08379 1002 aa19.61■□□□□ 0.73
CMTM3-212ENST00000566121 KIAA2012Q0VF49 1180 aa19.61■□□□□ 0.73
CMTM3-212ENST00000566121 WWC1Q8IX03 1113 aa19.61■□□□□ 0.73
CMTM3-212ENST00000566121 MPNDQ8N594 471 aa19.61■□□□□ 0.73
CMTM3-212ENST00000566121 ZBTB38Q8NAP3 1195 aaPredicted RBP19.61■□□□□ 0.73
CMTM3-212ENST00000566121 POTEIP0CG38 1075 aa19.6■□□□□ 0.73
CMTM3-212ENST00000566121 POTEJP0CG39 1038 aa19.6■□□□□ 0.73
CMTM3-212ENST00000566121 ZNRF3Q9ULT6 936 aa19.6■□□□□ 0.73
CMTM3-212ENST00000566121 CDHR2Q9BYE9 1310 aa19.59■□□□□ 0.73
CMTM3-212ENST00000566121 DDX58O95786 925 aaKnown RBP19.59■□□□□ 0.73
CMTM3-212ENST00000566121 HTRA3P83110 453 aa19.59■□□□□ 0.73
CMTM3-212ENST00000566121 CCDC184Q52MB2 194 aa19.59■□□□□ 0.73
CMTM3-212ENST00000566121 IFFO2Q5TF58 517 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms