RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 OPLAHO14841 1288 aa6.86□□□□□ -1.31
LINC00561-201ENST00000565815 MAN1A2O60476 641 aa6.86□□□□□ -1.31
LINC00561-201ENST00000565815 NPR3P17342 541 aa6.86□□□□□ -1.31
LINC00561-201ENST00000565815 GGNBP2Q9H3C7 697 aa6.86□□□□□ -1.31
LINC00561-201ENST00000565815 CHMP3Q9Y3E7 222 aa6.86□□□□□ -1.31
LINC00561-201ENST00000565815 CCDC88BA6NC98 1476 aa6.86□□□□□ -1.31
LINC00561-201ENST00000565815 SNAPC4Q5SXM2 1469 aa6.86□□□□□ -1.31
LINC00561-201ENST00000565815 SPATA31C2B4DYI2 1134 aa6.86□□□□□ -1.31
LINC00561-201ENST00000565815 PTSQ03393 145 aa6.86□□□□□ -1.31
LINC00561-201ENST00000565815 ORC1Q13415 861 aa6.86□□□□□ -1.31
LINC00561-201ENST00000565815 SF3B2Q13435 895 aaKnown RBP6.86□□□□□ -1.31
LINC00561-201ENST00000565815 RAB44Q7Z6P3 723 aaPredicted RBP6.86□□□□□ -1.31
LINC00561-201ENST00000565815 GIPC2Q8TF65 315 aa6.86□□□□□ -1.31
LINC00561-201ENST00000565815 ZIC5Q96T25 663 aa6.86□□□□□ -1.31
LINC00561-201ENST00000565815 DMGDHQ9UI17 866 aaKnown RBP6.86□□□□□ -1.31
LINC00561-201ENST00000565815 DCTN4Q9UJW0 460 aa6.86□□□□□ -1.31
LINC00561-201ENST00000565815 DCDC2BA2VCK2 349 aa6.85□□□□□ -1.31
LINC00561-201ENST00000565815 P4HBP07237 508 aaKnown RBP6.85□□□□□ -1.31
LINC00561-201ENST00000565815 TMC1Q8TDI8 760 aa6.85□□□□□ -1.31
LINC00561-201ENST00000565815 VEGFBP49765 207 aa6.85□□□□□ -1.31
LINC00561-201ENST00000565815 SCARF1Q14162 830 aa6.85□□□□□ -1.31
LINC00561-201ENST00000565815 C11orf91Q3C1V1 193 aa6.85□□□□□ -1.31
LINC00561-201ENST00000565815 IDH3AP50213 366 aa6.85□□□□□ -1.31
LINC00561-201ENST00000565815 NBPF1Q3BBV0 1214 aa6.85□□□□□ -1.31
LINC00561-201ENST00000565815 RIPOR1Q6ZS17 1223 aa6.85□□□□□ -1.31
LINC00561-201ENST00000565815 A0A1W2PNR3 127 aa6.84□□□□□ -1.31
LINC00561-201ENST00000565815 GPR25O00155 361 aa6.84□□□□□ -1.31
LINC00561-201ENST00000565815 SMCPP49901 116 aaPredicted RBP6.84□□□□□ -1.31
LINC00561-201ENST00000565815 C8orf34Q49A92 452 aa6.84□□□□□ -1.31
LINC00561-201ENST00000565815 FAM13AO94988 1023 aa6.84□□□□□ -1.32
LINC00561-201ENST00000565815 PDGFAP04085 211 aa6.84□□□□□ -1.32
LINC00561-201ENST00000565815 BRD2P25440 801 aaKnown RBP6.84□□□□□ -1.32
LINC00561-201ENST00000565815 CRIPAKQ8N1N5 446 aa6.84□□□□□ -1.32
LINC00561-201ENST00000565815 STRN4Q9NRL3 753 aa6.84□□□□□ -1.32
LINC00561-201ENST00000565815 KIAA1522Q9P206 1035 aaPredicted RBP6.84□□□□□ -1.32
LINC00561-201ENST00000565815 DGAT1O75907 488 aa6.83□□□□□ -1.32
LINC00561-201ENST00000565815 MICAL2O94851 1124 aa6.83□□□□□ -1.32
LINC00561-201ENST00000565815 MAPK8P45983 427 aa6.83□□□□□ -1.32
LINC00561-201ENST00000565815 BTLAQ7Z6A9 289 aa6.83□□□□□ -1.32
LINC00561-201ENST00000565815 ZNF16P17020 682 aaPredicted RBP6.83□□□□□ -1.32
LINC00561-201ENST00000565815 GTF2E1P29083 439 aaPredicted RBP6.83□□□□□ -1.32
LINC00561-201ENST00000565815 TYRO3Q06418 890 aa6.83□□□□□ -1.32
LINC00561-201ENST00000565815 USPL1Q5W0Q7 1092 aa6.83□□□□□ -1.32
LINC00561-201ENST00000565815 PI16Q6UXB8 463 aa6.83□□□□□ -1.32
LINC00561-201ENST00000565815 ASB16Q96NS5 453 aa6.83□□□□□ -1.32
LINC00561-201ENST00000565815 BCL2L13Q9BXK5 485 aa6.83□□□□□ -1.32
LINC00561-201ENST00000565815 FOXD3Q9UJU5 478 aaPredicted RBP6.83□□□□□ -1.32
LINC00561-201ENST00000565815 CTC1Q2NKJ3 1217 aa6.82□□□□□ -1.32
LINC00561-201ENST00000565815 NIF3L1Q9GZT8 377 aa6.82□□□□□ -1.32
LINC00561-201ENST00000565815 UBAP2LQ14157 1087 aaKnown RBP6.82□□□□□ -1.32
LINC00561-201ENST00000565815 Q6ZNB5 142 aa6.82□□□□□ -1.32
LINC00561-201ENST00000565815 KRT25Q7Z3Z0 450 aa6.82□□□□□ -1.32
LINC00561-201ENST00000565815 FBXO33Q7Z6M2 555 aa6.82□□□□□ -1.32
LINC00561-201ENST00000565815 BRPF3Q9ULD4 1205 aa6.82□□□□□ -1.32
LINC00561-201ENST00000565815 KCNMB2Q9Y691 235 aa6.82□□□□□ -1.32
LINC00561-201ENST00000565815 A0A1B0GTH6 734 aa6.81□□□□□ -1.32
LINC00561-201ENST00000565815 TGFBR3LH3BV60 316 aa6.81□□□□□ -1.32
LINC00561-201ENST00000565815 IRS1P35568 1242 aa6.81□□□□□ -1.32
LINC00561-201ENST00000565815 DBN1Q16643 649 aa6.81□□□□□ -1.32
LINC00561-201ENST00000565815 IRX2Q9BZI1 471 aaPredicted RBP6.81□□□□□ -1.32
LINC00561-201ENST00000565815 TMEM63CQ9P1W3 806 aa6.81□□□□□ -1.32
LINC00561-201ENST00000565815 INPP5BP32019 993 aa6.81□□□□□ -1.32
LINC00561-201ENST00000565815 CMTR1Q8N1G2 835 aaKnown RBP6.81□□□□□ -1.32
LINC00561-201ENST00000565815 TATP17735 454 aaPredicted RBP6.8□□□□□ -1.32
LINC00561-201ENST00000565815 GJD3Q8N144 294 aa6.8□□□□□ -1.32
LINC00561-201ENST00000565815 TDRD9Q8NDG6 1382 aaKnown RBP6.8□□□□□ -1.32
LINC00561-201ENST00000565815 TREHO43280 583 aa6.8□□□□□ -1.32
LINC00561-201ENST00000565815 SFSWAPQ12872 951 aaKnown RBP6.8□□□□□ -1.32
LINC00561-201ENST00000565815 CEP63Q96MT8 703 aa6.8□□□□□ -1.32
LINC00561-201ENST00000565815 FAM129BQ96TA1 746 aa6.8□□□□□ -1.32
LINC00561-201ENST00000565815 RTCBQ9Y3I0 505 aaKnown RBP6.8□□□□□ -1.32
LINC00561-201ENST00000565815 NDUFB5O43674 189 aa6.79□□□□□ -1.32
LINC00561-201ENST00000565815 EHHADHQ08426 723 aa6.79□□□□□ -1.32
LINC00561-201ENST00000565815 ABHD17AQ96GS6 310 aa6.79□□□□□ -1.32
LINC00561-201ENST00000565815 BRD7Q9NPI1 651 aa6.79□□□□□ -1.32
LINC00561-201ENST00000565815 ZDHHC3Q9NYG2 299 aa6.79□□□□□ -1.32
LINC00561-201ENST00000565815 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.79□□□□□ -1.32
LINC00561-201ENST00000565815 C1orf53Q5VUE5 145 aa6.79□□□□□ -1.32
LINC00561-201ENST00000565815 CCDC155Q8N6L0 562 aa6.79□□□□□ -1.32
LINC00561-201ENST00000565815 CFHR5Q9BXR6 569 aa6.79□□□□□ -1.32
LINC00561-201ENST00000565815 FGD5Q6ZNL6 1462 aa6.79□□□□□ -1.32
LINC00561-201ENST00000565815 PBRM1Q86U86 1689 aa6.78□□□□□ -1.32
LINC00561-201ENST00000565815 ABTB2Q8N961 1025 aa6.78□□□□□ -1.32
LINC00561-201ENST00000565815 MRRFQ96E11 262 aaKnown RBP6.78□□□□□ -1.32
LINC00561-201ENST00000565815 RBCK1Q9BYM8 510 aa6.78□□□□□ -1.32
LINC00561-201ENST00000565815 DYRK1BQ9Y463 629 aa6.78□□□□□ -1.32
LINC00561-201ENST00000565815 RAD54L2Q9Y4B4 1467 aa6.78□□□□□ -1.32
LINC00561-201ENST00000565815 RGS20O76081 388 aa6.78□□□□□ -1.32
LINC00561-201ENST00000565815 POLR3DP05423 398 aaPredicted RBP6.78□□□□□ -1.32
LINC00561-201ENST00000565815 DSC3Q14574 896 aa6.78□□□□□ -1.32
LINC00561-201ENST00000565815 NUP160Q12769 1436 aa6.78□□□□□ -1.32
LINC00561-201ENST00000565815 SHROOM2Q13796 1616 aa6.78□□□□□ -1.32
LINC00561-201ENST00000565815 SLC35F4A4IF30 521 aa6.78□□□□□ -1.32
LINC00561-201ENST00000565815 F11P03951 625 aa6.78□□□□□ -1.32
LINC00561-201ENST00000565815 CYP2E1P05181 493 aaPredicted RBP6.78□□□□□ -1.32
LINC00561-201ENST00000565815 CD33P20138 364 aa6.78□□□□□ -1.32
LINC00561-201ENST00000565815 TARSP26639 723 aaKnown RBP6.78□□□□□ -1.32
LINC00561-201ENST00000565815 TRIM52Q96A61 297 aa6.78□□□□□ -1.32
LINC00561-201ENST00000565815 ERCC6L2Q5T890 1561 aa6.77□□□□□ -1.33
LINC00561-201ENST00000565815 ABCC10Q5T3U5 1492 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms