RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 LNPKQ9C0E8 428 aa27.29■■□□□ 1.96
LINC01960-201ENST00000563759 POLA2Q14181 598 aa27.28■■□□□ 1.96
LINC01960-201ENST00000563759 ZNF652Q9Y2D9 606 aa27.28■■□□□ 1.96
LINC01960-201ENST00000563759 APBA3O96018 575 aa27.27■■□□□ 1.96
LINC01960-201ENST00000563759 CASP7P55210 303 aa27.27■■□□□ 1.96
LINC01960-201ENST00000563759 EXOC6BQ9Y2D4 811 aa27.27■■□□□ 1.96
LINC01960-201ENST00000563759 APBB1O00213 710 aa27.27■■□□□ 1.96
LINC01960-201ENST00000563759 NLRP10Q86W26 655 aa27.27■■□□□ 1.96
LINC01960-201ENST00000563759 TXNRD1Q16881 649 aa27.25■■□□□ 1.95
LINC01960-201ENST00000563759 PLSCR1O15162 318 aa27.24■■□□□ 1.95
LINC01960-201ENST00000563759 PCCAP05165 728 aaPredicted RBP27.24■■□□□ 1.95
LINC01960-201ENST00000563759 EPHA10Q5JZY3 1008 aa27.24■■□□□ 1.95
LINC01960-201ENST00000563759 ZNF34Q8IZ26 560 aa27.24■■□□□ 1.95
LINC01960-201ENST00000563759 UBN2Q6ZU65 1347 aa27.24■■□□□ 1.95
LINC01960-201ENST00000563759 SMIM5Q71RC9 77 aa27.23■■□□□ 1.95
LINC01960-201ENST00000563759 ZBTB38Q8NAP3 1195 aaPredicted RBP27.23■■□□□ 1.95
LINC01960-201ENST00000563759 HMGB2P26583 209 aaKnown RBP27.23■■□□□ 1.95
LINC01960-201ENST00000563759 SURF6O75683 361 aaKnown RBP27.22■■□□□ 1.95
LINC01960-201ENST00000563759 PHF14O94880 888 aa27.22■■□□□ 1.95
LINC01960-201ENST00000563759 PDE4AP27815 886 aa27.22■■□□□ 1.95
LINC01960-201ENST00000563759 CLEC4GQ6UXB4 293 aa27.22■■□□□ 1.95
LINC01960-201ENST00000563759 FAM89AQ96GI7 184 aa27.22■■□□□ 1.95
LINC01960-201ENST00000563759 BCL11AQ9H165 835 aa27.22■■□□□ 1.95
LINC01960-201ENST00000563759 RABL6Q3YEC7 729 aaPredicted RBP27.21■■□□□ 1.95
LINC01960-201ENST00000563759 NARFQ9UHQ1 456 aa27.21■■□□□ 1.95
LINC01960-201ENST00000563759 TRMT112Q9UI30 125 aaKnown RBP27.21■■□□□ 1.95
LINC01960-201ENST00000563759 NIP7Q9Y221 180 aaKnown RBP eCLIP27.21■■□□□ 1.95
LINC01960-201ENST00000563759 LAMB2P55268 1798 aa27.21■■□□□ 1.95
LINC01960-201ENST00000563759 ZPR1O75312 459 aa27.21■■□□□ 1.95
LINC01960-201ENST00000563759 PARP10Q53GL7 1025 aa27.2■■□□□ 1.94
LINC01960-201ENST00000563759 RGL2O15211 777 aa27.19■■□□□ 1.94
LINC01960-201ENST00000563759 AMIGO3Q86WK7 504 aa27.19■■□□□ 1.94
LINC01960-201ENST00000563759 LRRCC1Q9C099 1032 aa27.19■■□□□ 1.94
LINC01960-201ENST00000563759 CHMP3Q9Y3E7 222 aa27.19■■□□□ 1.94
LINC01960-201ENST00000563759 CDHR2Q9BYE9 1310 aa27.19■■□□□ 1.94
LINC01960-201ENST00000563759 FOXO4P98177 505 aa27.19■■□□□ 1.94
LINC01960-201ENST00000563759 HSP90AB4PQ58FF6 505 aa27.19■■□□□ 1.94
LINC01960-201ENST00000563759 TRAPPC3LQ5T215 181 aa27.19■■□□□ 1.94
LINC01960-201ENST00000563759 USPL1Q5W0Q7 1092 aa27.19■■□□□ 1.94
LINC01960-201ENST00000563759 LMBR1LQ6UX01 489 aa27.19■■□□□ 1.94
LINC01960-201ENST00000563759 PROM2Q8N271 834 aa27.19■■□□□ 1.94
LINC01960-201ENST00000563759 ARHGEF1Q92888 912 aaKnown RBP27.19■■□□□ 1.94
LINC01960-201ENST00000563759 TUBGCP6Q96RT7 1819 aa27.18■■□□□ 1.94
LINC01960-201ENST00000563759 SMARCA5O60264 1052 aaPredicted RBP27.18■■□□□ 1.94
LINC01960-201ENST00000563759 RFC4P35249 363 aa27.18■■□□□ 1.94
LINC01960-201ENST00000563759 OS9Q13438 667 aaPredicted RBP27.18■■□□□ 1.94
LINC01960-201ENST00000563759 SRP68Q9UHB9 627 aaKnown RBP27.18■■□□□ 1.94
LINC01960-201ENST00000563759 COL24A1Q17RW2 1714 aa27.18■■□□□ 1.94
LINC01960-201ENST00000563759 DDX60Q8IY21 1712 aaKnown RBP27.18■■□□□ 1.94
LINC01960-201ENST00000563759 RAB11FIP3O75154 756 aa27.17■■□□□ 1.94
LINC01960-201ENST00000563759 ADRA2BP18089 450 aa27.17■■□□□ 1.94
LINC01960-201ENST00000563759 PA2G4Q9UQ80 394 aaKnown RBP27.17■■□□□ 1.94
LINC01960-201ENST00000563759 UTP14AQ9BVJ6 771 aaKnown RBP27.16■■□□□ 1.94
LINC01960-201ENST00000563759 CASZ1Q86V15 1759 aa27.16■■□□□ 1.94
LINC01960-201ENST00000563759 USP42Q9H9J4 1324 aaKnown RBP27.16■■□□□ 1.94
LINC01960-201ENST00000563759 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.15■■□□□ 1.94
LINC01960-201ENST00000563759 FAM177BA6PVY3 158 aa27.15■■□□□ 1.94
LINC01960-201ENST00000563759 SUSD4Q5VX71 490 aa27.15■■□□□ 1.94
LINC01960-201ENST00000563759 ILDR1Q86SU0 546 aaPredicted RBP27.15■■□□□ 1.94
LINC01960-201ENST00000563759 NOP58Q9Y2X3 529 aaKnown RBP27.15■■□□□ 1.94
LINC01960-201ENST00000563759 SH3TC1Q8TE82 1336 aa27.15■■□□□ 1.94
LINC01960-201ENST00000563759 PLA2G12BQ9BX93 195 aa27.15■■□□□ 1.94
LINC01960-201ENST00000563759 IRS4O14654 1257 aaPredicted RBP27.14■■□□□ 1.94
LINC01960-201ENST00000563759 SSFA2P28290 1259 aa27.14■■□□□ 1.94
LINC01960-201ENST00000563759 SYNE4Q8N205 404 aa27.14■■□□□ 1.94
LINC01960-201ENST00000563759 BCL2L12Q9HB09 334 aa27.14■■□□□ 1.94
LINC01960-201ENST00000563759 BICDL1Q6ZP65 573 aa27.13■■□□□ 1.93
LINC01960-201ENST00000563759 ERC1Q8IUD2 1116 aa27.13■■□□□ 1.93
LINC01960-201ENST00000563759 KLHDC4Q8TBB5 520 aa27.13■■□□□ 1.93
LINC01960-201ENST00000563759 KIF1BPQ96EK5 621 aa27.13■■□□□ 1.93
LINC01960-201ENST00000563759 RHPN1Q8TCX5 695 aa27.12■■□□□ 1.93
LINC01960-201ENST00000563759 SIL1Q9H173 461 aa27.12■■□□□ 1.93
LINC01960-201ENST00000563759 G3BP1Q13283 466 aaKnown RBP eCLIP27.11■■□□□ 1.93
LINC01960-201ENST00000563759 TBC1D9BQ66K14 1250 aa27.11■■□□□ 1.93
LINC01960-201ENST00000563759 NTSR2O95665 410 aa27.1■■□□□ 1.93
LINC01960-201ENST00000563759 RFX5P48382 616 aaPredicted RBP27.1■■□□□ 1.93
LINC01960-201ENST00000563759 COPRSQ9NQ92 184 aa27.1■■□□□ 1.93
LINC01960-201ENST00000563759 C16orf71Q8IYS4 520 aaPredicted RBP27.1■■□□□ 1.93
LINC01960-201ENST00000563759 IL1RAPL2Q9NP60 686 aa27.1■■□□□ 1.93
LINC01960-201ENST00000563759 PDE8AO60658 829 aa27.09■■□□□ 1.93
LINC01960-201ENST00000563759 CTSWP56202 376 aa27.09■■□□□ 1.93
LINC01960-201ENST00000563759 PTPN12Q05209 780 aaKnown RBP27.09■■□□□ 1.93
LINC01960-201ENST00000563759 SETDB2Q96T68 719 aa27.09■■□□□ 1.93
LINC01960-201ENST00000563759 TFCP2L1Q9NZI6 479 aa27.08■■□□□ 1.93
LINC01960-201ENST00000563759 HSP90B1P14625 803 aaKnown RBP27.08■■□□□ 1.93
LINC01960-201ENST00000563759 CCDC57Q2TAC2 916 aa27.08■■□□□ 1.93
LINC01960-201ENST00000563759 FAM161AQ3B820 660 aa27.08■■□□□ 1.93
LINC01960-201ENST00000563759 PLEKHM2Q8IWE5 1019 aa27.08■■□□□ 1.93
LINC01960-201ENST00000563759 OTUD7AQ8TE49 926 aaPredicted RBP27.08■■□□□ 1.93
LINC01960-201ENST00000563759 SF3B2Q13435 895 aaKnown RBP27.07■■□□□ 1.92
LINC01960-201ENST00000563759 ZNF827Q17R98 1081 aa27.07■■□□□ 1.92
LINC01960-201ENST00000563759 NUTM1Q86Y26 1132 aa27.07■■□□□ 1.92
LINC01960-201ENST00000563759 CCDC85AQ96PX6 553 aaPredicted RBP27.07■■□□□ 1.92
LINC01960-201ENST00000563759 CSF1RP07333 972 aa27.06■■□□□ 1.92
LINC01960-201ENST00000563759 TSHZ2Q9NRE2 1034 aa27.06■■□□□ 1.92
LINC01960-201ENST00000563759 AKT1S1Q96B36 256 aa27.06■■□□□ 1.92
LINC01960-201ENST00000563759 HCLS1P14317 486 aaPredicted RBP27.05■■□□□ 1.92
LINC01960-201ENST00000563759 IFIT5Q13325 482 aaKnown RBP27.05■■□□□ 1.92
LINC01960-201ENST00000563759 TTLL11Q8NHH1 800 aa27.05■■□□□ 1.92
LINC01960-201ENST00000563759 SPEF2Q9C093 1822 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms