RNA–Protein interactions for RNA: ENST00000563705.5

SPSB3-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 876 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-203ENST00000563705 DBF4Q9UBU7 674 aaPredicted RBP27.54■■■□□ 2
SPSB3-203ENST00000563705 GLTPD2A6NH11 291 aa27.53■■■□□ 2
SPSB3-203ENST00000563705 HSPA6P17066 643 aa27.53■■■□□ 2
SPSB3-203ENST00000563705 AIMP1Q12904 312 aaKnown RBP27.53■■■□□ 2
SPSB3-203ENST00000563705 DUSP27Q5VZP5 1158 aa27.53■■■□□ 2
SPSB3-203ENST00000563705 CEP350Q5VT06 3117 aa27.52■■■□□ 2
SPSB3-203ENST00000563705 HOXA10P31260 410 aaPredicted RBP27.51■■□□□ 1.99
SPSB3-203ENST00000563705 C16orf71Q8IYS4 520 aaPredicted RBP27.51■■□□□ 1.99
SPSB3-203ENST00000563705 RBM46Q8TBY0 533 aaKnown RBP27.51■■□□□ 1.99
SPSB3-203ENST00000563705 UTP14AQ9BVJ6 771 aaKnown RBP27.51■■□□□ 1.99
SPSB3-203ENST00000563705 RPGRQ92834 1020 aaKnown RBP27.5■■□□□ 1.99
SPSB3-203ENST00000563705 RRAGCQ9HB90 399 aa27.5■■□□□ 1.99
SPSB3-203ENST00000563705 FKBP4Q02790 459 aaKnown RBP eCLIP27.49■■□□□ 1.99
SPSB3-203ENST00000563705 TCIRG1Q13488 830 aa27.49■■□□□ 1.99
SPSB3-203ENST00000563705 RTKN2Q8IZC4 609 aa27.49■■□□□ 1.99
SPSB3-203ENST00000563705 MRS2Q9HD23 443 aa27.49■■□□□ 1.99
SPSB3-203ENST00000563705 HYPKQ9NX55 129 aa27.49■■□□□ 1.99
SPSB3-203ENST00000563705 WDR90Q96KV7 1748 aa27.48■■□□□ 1.99
SPSB3-203ENST00000563705 CCDC27Q2M243 656 aa27.48■■□□□ 1.99
SPSB3-203ENST00000563705 NLRP10Q86W26 655 aa27.48■■□□□ 1.99
SPSB3-203ENST00000563705 PLBD2Q8NHP8 589 aa27.48■■□□□ 1.99
SPSB3-203ENST00000563705 SLC10A5Q5PT55 438 aa27.47■■□□□ 1.99
SPSB3-203ENST00000563705 DPY19L2Q6NUT2 758 aa27.47■■□□□ 1.99
SPSB3-203ENST00000563705 SNED1Q8TER0 1413 aa27.47■■□□□ 1.99
SPSB3-203ENST00000563705 NCBP3Q53F19 620 aaKnown RBP27.46■■□□□ 1.99
SPSB3-203ENST00000563705 CC2D2BQ6DHV5 1058 aa27.46■■□□□ 1.99
SPSB3-203ENST00000563705 RBM17Q96I25 401 aaKnown RBP27.46■■□□□ 1.99
SPSB3-203ENST00000563705 NLRP3Q96P20 1036 aa27.46■■□□□ 1.99
SPSB3-203ENST00000563705 CRAMP1Q96RY5 1269 aa27.46■■□□□ 1.99
SPSB3-203ENST00000563705 ANKRD13DQ6ZTN6 518 aa27.45■■□□□ 1.98
SPSB3-203ENST00000563705 VEGFAP15692 232 aaPredicted RBP27.44■■□□□ 1.98
SPSB3-203ENST00000563705 OLFM4Q6UX06 510 aa27.44■■□□□ 1.98
SPSB3-203ENST00000563705 CHMP4AQ9BY43 222 aa27.44■■□□□ 1.98
SPSB3-203ENST00000563705 LAMB2P55268 1798 aa27.43■■□□□ 1.98
SPSB3-203ENST00000563705 FSTL1Q12841 308 aa27.43■■□□□ 1.98
SPSB3-203ENST00000563705 C3orf67Q6ZVT6 689 aa27.43■■□□□ 1.98
SPSB3-203ENST00000563705 GRIPAP1Q4V328 841 aa27.42■■□□□ 1.98
SPSB3-203ENST00000563705 PSMD1Q99460 953 aa27.42■■□□□ 1.98
SPSB3-203ENST00000563705 TRMT112Q9UI30 125 aaKnown RBP27.42■■□□□ 1.98
SPSB3-203ENST00000563705 SH3TC1Q8TE82 1336 aa27.41■■□□□ 1.98
SPSB3-203ENST00000563705 ISCA1Q9BUE6 129 aa27.41■■□□□ 1.98
SPSB3-203ENST00000563705 ZNF277Q9NRM2 450 aaPredicted RBP27.41■■□□□ 1.98
SPSB3-203ENST00000563705 PPEF1O14829 653 aaPredicted RBP27.4■■□□□ 1.98
SPSB3-203ENST00000563705 APLP1P51693 650 aa27.4■■□□□ 1.98
SPSB3-203ENST00000563705 WWC1Q8IX03 1113 aa27.4■■□□□ 1.98
SPSB3-203ENST00000563705 C8orf58Q8NAV2 365 aa27.4■■□□□ 1.98
SPSB3-203ENST00000563705 IL16Q14005 1332 aa27.4■■□□□ 1.98
SPSB3-203ENST00000563705 ELL2O00472 640 aaPredicted RBP27.39■■□□□ 1.98
SPSB3-203ENST00000563705 IARSP41252 1262 aaKnown RBP27.38■■□□□ 1.97
SPSB3-203ENST00000563705 GOLGA2Q08379 1002 aa27.38■■□□□ 1.97
SPSB3-203ENST00000563705 SYNE4Q8N205 404 aa27.38■■□□□ 1.97
SPSB3-203ENST00000563705 SMC1BQ8NDV3 1235 aa27.38■■□□□ 1.97
SPSB3-203ENST00000563705 POTECB2RU33 542 aa27.37■■□□□ 1.97
SPSB3-203ENST00000563705 HCLS1P14317 486 aaPredicted RBP27.37■■□□□ 1.97
SPSB3-203ENST00000563705 TRIM28Q13263 835 aaKnown RBP27.37■■□□□ 1.97
SPSB3-203ENST00000563705 CCDC30Q5VVM6 783 aa27.37■■□□□ 1.97
SPSB3-203ENST00000563705 DDX60Q8IY21 1712 aaKnown RBP27.37■■□□□ 1.97
SPSB3-203ENST00000563705 ABCC4O15439 1325 aa27.37■■□□□ 1.97
SPSB3-203ENST00000563705 TSR2Q969E8 191 aaKnown RBP27.36■■□□□ 1.97
SPSB3-203ENST00000563705 DDNO94850 711 aaPredicted RBP27.35■■□□□ 1.97
SPSB3-203ENST00000563705 PHAXQ9H814 394 aaKnown RBP27.35■■□□□ 1.97
SPSB3-203ENST00000563705 RIC3Q7Z5B4 369 aa27.34■■□□□ 1.97
SPSB3-203ENST00000563705 L3MBTL3Q96JM7 780 aaPredicted RBP27.34■■□□□ 1.97
SPSB3-203ENST00000563705 TMX4Q9H1E5 349 aaPredicted RBP27.34■■□□□ 1.97
SPSB3-203ENST00000563705 ATP5J2-PTCD1G3V325 749 aa27.33■■□□□ 1.97
SPSB3-203ENST00000563705 TSPYL6Q8N831 410 aa27.33■■□□□ 1.97
SPSB3-203ENST00000563705 ATP6V0A2Q9Y487 856 aa27.33■■□□□ 1.97
SPSB3-203ENST00000563705 SCN4AP35499 1836 aa27.32■■□□□ 1.96
SPSB3-203ENST00000563705 BBOX1O75936 387 aa27.32■■□□□ 1.96
SPSB3-203ENST00000563705 DDX46Q7L014 1031 aaKnown RBP27.32■■□□□ 1.96
SPSB3-203ENST00000563705 ZNF541Q9H0D2 1346 aa27.32■■□□□ 1.96
SPSB3-203ENST00000563705 IQCA1LA6NCM1 817 aa27.31■■□□□ 1.96
SPSB3-203ENST00000563705 FZD9O00144 591 aa27.31■■□□□ 1.96
SPSB3-203ENST00000563705 JDP2Q8WYK2 163 aa27.31■■□□□ 1.96
SPSB3-203ENST00000563705 TCERG1O14776 1098 aaKnown RBP27.3■■□□□ 1.96
SPSB3-203ENST00000563705 DDX58O95786 925 aaKnown RBP27.3■■□□□ 1.96
SPSB3-203ENST00000563705 GRAPQ13588 217 aa27.3■■□□□ 1.96
SPSB3-203ENST00000563705 GRAPLQ8TC17 118 aaPredicted RBP27.3■■□□□ 1.96
SPSB3-203ENST00000563705 FAM89AQ96GI7 184 aa27.3■■□□□ 1.96
SPSB3-203ENST00000563705 SLC51AQ86UW1 340 aa27.29■■□□□ 1.96
SPSB3-203ENST00000563705 COL4A5P29400 1685 aa27.29■■□□□ 1.96
SPSB3-203ENST00000563705 TWISTNBQ3B726 338 aaPredicted RBP27.28■■□□□ 1.96
SPSB3-203ENST00000563705 TMC4Q7Z404 712 aa27.28■■□□□ 1.96
SPSB3-203ENST00000563705 WDR63Q8IWG1 891 aa27.28■■□□□ 1.96
SPSB3-203ENST00000563705 SP8Q8IXZ3 490 aa27.28■■□□□ 1.96
SPSB3-203ENST00000563705 STK31Q9BXU1 1019 aa27.28■■□□□ 1.96
SPSB3-203ENST00000563705 LRRC37AA6NMS7 1700 aa27.27■■□□□ 1.96
SPSB3-203ENST00000563705 FANCIQ9NVI1 1328 aa27.27■■□□□ 1.96
SPSB3-203ENST00000563705 SF3B3Q15393 1217 aaKnown RBP27.27■■□□□ 1.96
SPSB3-203ENST00000563705 LARGE2Q8N3Y3 721 aa27.27■■□□□ 1.96
SPSB3-203ENST00000563705 CCDC191Q8NCU4 936 aa27.27■■□□□ 1.96
SPSB3-203ENST00000563705 ZNF428Q96B54 188 aa27.27■■□□□ 1.96
SPSB3-203ENST00000563705 MYD88Q99836 296 aa27.27■■□□□ 1.96
SPSB3-203ENST00000563705 VPS33BQ9H267 617 aa27.27■■□□□ 1.96
SPSB3-203ENST00000563705 ZBTB38Q8NAP3 1195 aaPredicted RBP27.26■■□□□ 1.95
SPSB3-203ENST00000563705 SUPT20HQ8NEM7 779 aa27.26■■□□□ 1.95
SPSB3-203ENST00000563705 METTL22Q9BUU2 404 aaPredicted RBP27.26■■□□□ 1.95
SPSB3-203ENST00000563705 RTFDC1Q9BY42 306 aaPredicted RBP27.26■■□□□ 1.95
SPSB3-203ENST00000563705 IRS4O14654 1257 aaPredicted RBP27.25■■□□□ 1.95
SPSB3-203ENST00000563705 HSP90B1P14625 803 aaKnown RBP27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms