RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 ABTB2Q8N961 1025 aa9.12□□□□□ -0.95
LINC00254-201ENST00000563416 ACDQ96AP0 544 aa9.12□□□□□ -0.95
LINC00254-201ENST00000563416 CELA2BP08218 269 aaPredicted RBP9.11□□□□□ -0.95
LINC00254-201ENST00000563416 LORP23490 312 aaPredicted RBP9.11□□□□□ -0.95
LINC00254-201ENST00000563416 ADH6P28332 368 aa9.11□□□□□ -0.95
LINC00254-201ENST00000563416 SPEM2Q0P670 501 aa9.11□□□□□ -0.95
LINC00254-201ENST00000563416 ZNF468Q5VIY5 522 aaPredicted RBP9.11□□□□□ -0.95
LINC00254-201ENST00000563416 LYPD4Q6UWN0 246 aa9.11□□□□□ -0.95
LINC00254-201ENST00000563416 EFCC1Q9HA90 598 aa9.11□□□□□ -0.95
LINC00254-201ENST00000563416 FAM13BQ9NYF5 915 aa9.11□□□□□ -0.95
LINC00254-201ENST00000563416 STIM2Q9P246 746 aa9.11□□□□□ -0.95
LINC00254-201ENST00000563416 SEPT3Q9UH03 358 aa9.11□□□□□ -0.95
LINC00254-201ENST00000563416 INPP5BP32019 993 aa9.1□□□□□ -0.95
LINC00254-201ENST00000563416 SLCO4C1Q6ZQN7 724 aa9.1□□□□□ -0.95
LINC00254-201ENST00000563416 HELQQ8TDG4 1101 aa9.1□□□□□ -0.95
LINC00254-201ENST00000563416 C11orf16Q9NQ32 467 aa9.1□□□□□ -0.95
LINC00254-201ENST00000563416 HCN2Q9UL51 889 aa9.1□□□□□ -0.95
LINC00254-201ENST00000563416 WHAMMQ8TF30 809 aa9.09□□□□□ -0.95
LINC00254-201ENST00000563416 GGA1Q9UJY5 639 aa9.09□□□□□ -0.95
LINC00254-201ENST00000563416 NEURL1BA8MQ27 555 aa9.08□□□□□ -0.96
LINC00254-201ENST00000563416 TNFRSF10BO14763 440 aa9.08□□□□□ -0.96
LINC00254-201ENST00000563416 OIP5O43482 229 aa9.08□□□□□ -0.96
LINC00254-201ENST00000563416 PHLDB3Q6NSJ2 640 aa9.08□□□□□ -0.96
LINC00254-201ENST00000563416 ETFBKMTQ8IXQ9 262 aa9.08□□□□□ -0.96
LINC00254-201ENST00000563416 GTF3C2Q8WUA4 911 aaPredicted RBP9.08□□□□□ -0.96
LINC00254-201ENST00000563416 PNMA5Q96PV4 448 aa9.08□□□□□ -0.96
LINC00254-201ENST00000563416 DNMT3AQ9Y6K1 912 aaPredicted RBP9.08□□□□□ -0.96
LINC00254-201ENST00000563416 SIN3BO75182 1162 aa9.07□□□□□ -0.96
LINC00254-201ENST00000563416 ARID4AP29374 1257 aaPredicted RBP9.07□□□□□ -0.96
LINC00254-201ENST00000563416 PCBP4P57723 403 aaKnown RBP9.07□□□□□ -0.96
LINC00254-201ENST00000563416 CCINQ13939 588 aa9.07□□□□□ -0.96
LINC00254-201ENST00000563416 SYT9Q86SS6 491 aa9.07□□□□□ -0.96
LINC00254-201ENST00000563416 GALNT6Q8NCL4 622 aa9.07□□□□□ -0.96
LINC00254-201ENST00000563416 NEDD1Q8NHV4 660 aa9.07□□□□□ -0.96
LINC00254-201ENST00000563416 SLC30A3Q99726 388 aa9.07□□□□□ -0.96
LINC00254-201ENST00000563416 SCNN1AP37088 669 aa9.06□□□□□ -0.96
LINC00254-201ENST00000563416 RGL4Q8IZJ4 473 aa9.06□□□□□ -0.96
LINC00254-201ENST00000563416 EDARADDQ8WWZ3 215 aa9.06□□□□□ -0.96
LINC00254-201ENST00000563416 RTCBQ9Y3I0 505 aaKnown RBP9.06□□□□□ -0.96
LINC00254-201ENST00000563416 ARHGEF15O94989 841 aa9.05□□□□□ -0.96
LINC00254-201ENST00000563416 ZAP70P43403 619 aa9.05□□□□□ -0.96
LINC00254-201ENST00000563416 SF3B2Q13435 895 aaKnown RBP9.05□□□□□ -0.96
LINC00254-201ENST00000563416 GRIN2CQ14957 1233 aa9.05□□□□□ -0.96
LINC00254-201ENST00000563416 PIK3R5Q8WYR1 880 aa9.05□□□□□ -0.96
LINC00254-201ENST00000563416 BHMTQ93088 406 aa9.05□□□□□ -0.96
LINC00254-201ENST00000563416 OPLAHO14841 1288 aa9.04□□□□□ -0.96
LINC00254-201ENST00000563416 ABL1P00519 1130 aa9.04□□□□□ -0.96
LINC00254-201ENST00000563416 EPXP11678 715 aa9.04□□□□□ -0.96
LINC00254-201ENST00000563416 ALAS2P22557 587 aa9.04□□□□□ -0.96
LINC00254-201ENST00000563416 RAB44Q7Z6P3 723 aaPredicted RBP9.04□□□□□ -0.96
LINC00254-201ENST00000563416 CMTR1Q8N1G2 835 aaKnown RBP9.04□□□□□ -0.96
LINC00254-201ENST00000563416 GSX2Q9BZM3 304 aa9.04□□□□□ -0.96
LINC00254-201ENST00000563416 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.04□□□□□ -0.96
LINC00254-201ENST00000563416 BRD1O95696 1058 aa9.03□□□□□ -0.96
LINC00254-201ENST00000563416 AMPD1P23109 780 aa9.03□□□□□ -0.96
LINC00254-201ENST00000563416 MARSP56192 900 aaKnown RBP9.03□□□□□ -0.96
LINC00254-201ENST00000563416 NOM1Q5C9Z4 860 aaKnown RBP9.03□□□□□ -0.96
LINC00254-201ENST00000563416 ALKBH2Q6NS38 261 aa9.03□□□□□ -0.96
LINC00254-201ENST00000563416 FCHSD1Q86WN1 690 aa9.03□□□□□ -0.96
LINC00254-201ENST00000563416 TNFRSF25Q93038 417 aa9.03□□□□□ -0.96
LINC00254-201ENST00000563416 EGFL7Q9UHF1 273 aa9.03□□□□□ -0.96
LINC00254-201ENST00000563416 ADAMTS8Q9UP79 889 aa9.03□□□□□ -0.96
LINC00254-201ENST00000563416 FNDC3AQ9Y2H6 1198 aaKnown RBP9.03□□□□□ -0.96
LINC00254-201ENST00000563416 ELOA3CA0A087WX78 387 aaPredicted RBP9.02□□□□□ -0.97
LINC00254-201ENST00000563416 ELOA3DA6NLF2 546 aaPredicted RBP9.02□□□□□ -0.97
LINC00254-201ENST00000563416 FAM13AO94988 1023 aa9.02□□□□□ -0.97
LINC00254-201ENST00000563416 FKBP4Q02790 459 aaKnown RBP eCLIP9.02□□□□□ -0.97
LINC00254-201ENST00000563416 ELOA3BQ3SY89 546 aa9.02□□□□□ -0.97
LINC00254-201ENST00000563416 ELOA3Q8NG57 546 aa9.02□□□□□ -0.97
LINC00254-201ENST00000563416 CCER1Q8TC90 406 aaPredicted RBP9.02□□□□□ -0.97
LINC00254-201ENST00000563416 KLF15Q9UIH9 416 aa9.02□□□□□ -0.97
LINC00254-201ENST00000563416 XYLBO75191 536 aa9.01□□□□□ -0.97
LINC00254-201ENST00000563416 EGFRP00533 1210 aa9.01□□□□□ -0.97
LINC00254-201ENST00000563416 RPLP1P05386 114 aaKnown RBP9.01□□□□□ -0.97
LINC00254-201ENST00000563416 PCSK2P16519 638 aa9.01□□□□□ -0.97
LINC00254-201ENST00000563416 NFKB1P19838 968 aa9.01□□□□□ -0.97
LINC00254-201ENST00000563416 GRNP28799 593 aaKnown RBP9.01□□□□□ -0.97
LINC00254-201ENST00000563416 FAM26DQ5JW98 314 aa9.01□□□□□ -0.97
LINC00254-201ENST00000563416 C1orf229Q6ZS94 237 aaPredicted RBP9.01□□□□□ -0.97
LINC00254-201ENST00000563416 USP20Q9Y2K6 914 aa9.01□□□□□ -0.97
LINC00254-201ENST00000563416 ADARB2-AS1A8MUL3 147 aa9□□□□□ -0.97
LINC00254-201ENST00000563416 SHISA8B8ZZ34 492 aa9□□□□□ -0.97
LINC00254-201ENST00000563416 MPSTP25325 297 aa9□□□□□ -0.97
LINC00254-201ENST00000563416 PODNQ7Z5L7 613 aa9□□□□□ -0.97
LINC00254-201ENST00000563416 TTC16Q8NEE8 873 aa9□□□□□ -0.97
LINC00254-201ENST00000563416 GPR152Q8TDT2 470 aa9□□□□□ -0.97
LINC00254-201ENST00000563416 SCARF2Q96GP6 870 aaPredicted RBP9□□□□□ -0.97
LINC00254-201ENST00000563416 UBE2OQ9C0C9 1292 aaKnown RBP9□□□□□ -0.97
LINC00254-201ENST00000563416 RNF225M0QZC1 329 aaPredicted RBP8.99□□□□□ -0.97
LINC00254-201ENST00000563416 ZBTB39O15060 712 aa8.99□□□□□ -0.97
LINC00254-201ENST00000563416 RARAP10276 462 aa8.99□□□□□ -0.97
LINC00254-201ENST00000563416 NPR3P17342 541 aa8.99□□□□□ -0.97
LINC00254-201ENST00000563416 EIF1AXP47813 144 aaKnown RBP8.99□□□□□ -0.97
LINC00254-201ENST00000563416 ZNF211Q13398 564 aaPredicted RBP8.99□□□□□ -0.97
LINC00254-201ENST00000563416 MTMR3Q13615 1198 aa8.99□□□□□ -0.97
LINC00254-201ENST00000563416 AAMPQ13685 434 aa8.99□□□□□ -0.97
LINC00254-201ENST00000563416 PCSK7Q16549 785 aa8.99□□□□□ -0.97
LINC00254-201ENST00000563416 KRT25Q7Z3Z0 450 aa8.99□□□□□ -0.97
LINC00254-201ENST00000563416 RRAGCQ9HB90 399 aa8.99□□□□□ -0.97
LINC00254-201ENST00000563416 KCNMB2Q9Y691 235 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms