RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 PRELPP51888 382 aa24.57■■□□□ 1.52
TRADD-203ENST00000563348 SOGA3Q5TF21 947 aa24.57■■□□□ 1.52
TRADD-203ENST00000563348 CCDC30Q5VVM6 783 aa24.57■■□□□ 1.52
TRADD-203ENST00000563348 RIC1Q4ADV7 1423 aa24.56■■□□□ 1.52
TRADD-203ENST00000563348 RNF123Q5XPI4 1314 aa24.56■■□□□ 1.52
TRADD-203ENST00000563348 HOXA10P31260 410 aaPredicted RBP24.55■■□□□ 1.52
TRADD-203ENST00000563348 C1QTNF8P60827 252 aa24.55■■□□□ 1.52
TRADD-203ENST00000563348 PHAXQ9H814 394 aaKnown RBP24.55■■□□□ 1.52
TRADD-203ENST00000563348 SLX4Q8IY92 1834 aa24.55■■□□□ 1.52
TRADD-203ENST00000563348 NLRP3Q96P20 1036 aa24.54■■□□□ 1.52
TRADD-203ENST00000563348 ISCA1Q9BUE6 129 aa24.54■■□□□ 1.52
TRADD-203ENST00000563348 TRMT112Q9UI30 125 aaKnown RBP24.53■■□□□ 1.52
TRADD-203ENST00000563348 LTBP3Q9NS15 1303 aa24.53■■□□□ 1.52
TRADD-203ENST00000563348 SBF1O95248 1867 aa24.53■■□□□ 1.52
TRADD-203ENST00000563348 GOLGA2Q08379 1002 aa24.52■■□□□ 1.52
TRADD-203ENST00000563348 TRIM28Q13263 835 aaKnown RBP24.52■■□□□ 1.52
TRADD-203ENST00000563348 TWISTNBQ3B726 338 aaPredicted RBP24.52■■□□□ 1.52
TRADD-203ENST00000563348 C3orf67Q6ZVT6 689 aa24.52■■□□□ 1.52
TRADD-203ENST00000563348 RIC3Q7Z5B4 369 aa24.52■■□□□ 1.52
TRADD-203ENST00000563348 RPGRQ92834 1020 aaKnown RBP24.52■■□□□ 1.52
TRADD-203ENST00000563348 TAOK3Q9H2K8 898 aa24.52■■□□□ 1.52
TRADD-203ENST00000563348 ZC3H4Q9UPT8 1303 aaKnown RBP24.52■■□□□ 1.52
TRADD-203ENST00000563348 CCDC93Q567U6 631 aa24.51■■□□□ 1.51
TRADD-203ENST00000563348 RBM17Q96I25 401 aaKnown RBP24.51■■□□□ 1.51
TRADD-203ENST00000563348 CRAMP1Q96RY5 1269 aa24.51■■□□□ 1.51
TRADD-203ENST00000563348 ATP5J2-PTCD1G3V325 749 aa24.5■■□□□ 1.51
TRADD-203ENST00000563348 SYNE4Q8N205 404 aa24.5■■□□□ 1.51
TRADD-203ENST00000563348 SH3TC1Q8TE82 1336 aa24.5■■□□□ 1.51
TRADD-203ENST00000563348 FANCIQ9NVI1 1328 aa24.5■■□□□ 1.51
TRADD-203ENST00000563348 KIF3CO14782 793 aa24.49■■□□□ 1.51
TRADD-203ENST00000563348 HCLS1P14317 486 aaPredicted RBP24.49■■□□□ 1.51
TRADD-203ENST00000563348 OLFM4Q6UX06 510 aa24.48■■□□□ 1.51
TRADD-203ENST00000563348 RTKN2Q8IZC4 609 aa24.48■■□□□ 1.51
TRADD-203ENST00000563348 STK31Q9BXU1 1019 aa24.48■■□□□ 1.51
TRADD-203ENST00000563348 TNRC6CQ9HCJ0 1690 aaKnown RBP24.48■■□□□ 1.51
TRADD-203ENST00000563348 SPINK5Q9NQ38 1064 aaPredicted RBP24.48■■□□□ 1.51
TRADD-203ENST00000563348 KDM2BQ8NHM5 1336 aa24.47■■□□□ 1.51
TRADD-203ENST00000563348 DDX58O95786 925 aaKnown RBP24.47■■□□□ 1.51
TRADD-203ENST00000563348 CC2D2BQ6DHV5 1058 aa24.47■■□□□ 1.51
TRADD-203ENST00000563348 NMRK2Q9NPI5 230 aa24.47■■□□□ 1.51
TRADD-203ENST00000563348 TCERG1O14776 1098 aaKnown RBP24.46■■□□□ 1.51
TRADD-203ENST00000563348 VAMP4O75379 141 aa24.46■■□□□ 1.51
TRADD-203ENST00000563348 ZNF428Q96B54 188 aa24.46■■□□□ 1.51
TRADD-203ENST00000563348 FER1L6Q2WGJ9 1857 aa24.46■■□□□ 1.51
TRADD-203ENST00000563348 ARFGEF2Q9Y6D5 1785 aa24.46■■□□□ 1.51
TRADD-203ENST00000563348 ANKRD36CQ5JPF3 1778 aa24.45■■□□□ 1.5
TRADD-203ENST00000563348 CCER2I3L3R5 266 aa24.45■■□□□ 1.5
TRADD-203ENST00000563348 SLC4A2P04920 1241 aa24.45■■□□□ 1.5
TRADD-203ENST00000563348 FKBP4Q02790 459 aaKnown RBP eCLIP24.45■■□□□ 1.5
TRADD-203ENST00000563348 EXOSC9Q06265 439 aaKnown RBP24.45■■□□□ 1.5
TRADD-203ENST00000563348 FAM89AQ96GI7 184 aa24.45■■□□□ 1.5
TRADD-203ENST00000563348 MYH16Q9H6N6 1097 aa24.45■■□□□ 1.5
TRADD-203ENST00000563348 GLTPD2A6NH11 291 aa24.44■■□□□ 1.5
TRADD-203ENST00000563348 KSR2Q6VAB6 950 aa24.44■■□□□ 1.5
TRADD-203ENST00000563348 MYD88Q99836 296 aa24.44■■□□□ 1.5
TRADD-203ENST00000563348 METTL22Q9BUU2 404 aaPredicted RBP24.44■■□□□ 1.5
TRADD-203ENST00000563348 ZNF521Q96K83 1311 aa24.43■■□□□ 1.5
TRADD-203ENST00000563348 CACNA1SQ13698 1873 aa24.43■■□□□ 1.5
TRADD-203ENST00000563348 PI4KAP2A4QPH2 592 aa24.42■■□□□ 1.5
TRADD-203ENST00000563348 GRIPAP1Q4V328 841 aa24.42■■□□□ 1.5
TRADD-203ENST00000563348 G2E3Q7L622 706 aa24.42■■□□□ 1.5
TRADD-203ENST00000563348 PI4KAP1Q8N8J0 262 aa24.42■■□□□ 1.5
TRADD-203ENST00000563348 CCDC191Q8NCU4 936 aa24.42■■□□□ 1.5
TRADD-203ENST00000563348 MAP3K2Q9Y2U5 619 aa24.42■■□□□ 1.5
TRADD-203ENST00000563348 PPEF1O14829 653 aaPredicted RBP24.41■■□□□ 1.5
TRADD-203ENST00000563348 BBOX1O75936 387 aa24.41■■□□□ 1.5
TRADD-203ENST00000563348 DPY19L2Q6NUT2 758 aa24.41■■□□□ 1.5
TRADD-203ENST00000563348 PSMD1Q99460 953 aa24.41■■□□□ 1.5
TRADD-203ENST00000563348 RRAGCQ9HB90 399 aa24.41■■□□□ 1.5
TRADD-203ENST00000563348 ZNF277Q9NRM2 450 aaPredicted RBP24.41■■□□□ 1.5
TRADD-203ENST00000563348 CCDC88AQ3V6T2 1871 aa24.41■■□□□ 1.5
TRADD-203ENST00000563348 ABCC4O15439 1325 aa24.4■■□□□ 1.5
TRADD-203ENST00000563348 SF3B3Q15393 1217 aaKnown RBP24.4■■□□□ 1.5
TRADD-203ENST00000563348 DDX46Q7L014 1031 aaKnown RBP24.4■■□□□ 1.5
TRADD-203ENST00000563348 ZBTB38Q8NAP3 1195 aaPredicted RBP24.4■■□□□ 1.5
TRADD-203ENST00000563348 SNED1Q8TER0 1413 aa24.39■■□□□ 1.5
TRADD-203ENST00000563348 IRS4O14654 1257 aaPredicted RBP24.39■■□□□ 1.49
TRADD-203ENST00000563348 TOMM70O94826 608 aa24.39■■□□□ 1.49
TRADD-203ENST00000563348 RTL5Q5HYW3 569 aaPredicted RBP24.39■■□□□ 1.49
TRADD-203ENST00000563348 CWC25Q9NXE8 425 aaPredicted RBP24.39■■□□□ 1.49
TRADD-203ENST00000563348 ATP6V0A2Q9Y487 856 aa24.39■■□□□ 1.49
TRADD-203ENST00000563348 TMX4Q9H1E5 349 aaPredicted RBP24.38■■□□□ 1.49
TRADD-203ENST00000563348 PCCAP05165 728 aaPredicted RBP24.37■■□□□ 1.49
TRADD-203ENST00000563348 IARSP41252 1262 aaKnown RBP24.37■■□□□ 1.49
TRADD-203ENST00000563348 FLIIQ13045 1269 aa24.37■■□□□ 1.49
TRADD-203ENST00000563348 GRAPQ13588 217 aa24.37■■□□□ 1.49
TRADD-203ENST00000563348 GRAPLQ8TC17 118 aaPredicted RBP24.37■■□□□ 1.49
TRADD-203ENST00000563348 IGKV5-2P06315 115 aa24.36■■□□□ 1.49
TRADD-203ENST00000563348 HSP90B1P14625 803 aaKnown RBP24.36■■□□□ 1.49
TRADD-203ENST00000563348 SLC51AQ86UW1 340 aa24.36■■□□□ 1.49
TRADD-203ENST00000563348 SP8Q8IXZ3 490 aa24.36■■□□□ 1.49
TRADD-203ENST00000563348 VEGFAP15692 232 aaPredicted RBP24.35■■□□□ 1.49
TRADD-203ENST00000563348 NEXNQ0ZGT2 675 aa24.35■■□□□ 1.49
TRADD-203ENST00000563348 DICER1Q9UPY3 1922 aaKnown RBP24.35■■□□□ 1.49
TRADD-203ENST00000563348 C16orf71Q8IYS4 520 aaPredicted RBP24.34■■□□□ 1.49
TRADD-203ENST00000563348 TMC4Q7Z404 712 aa24.33■■□□□ 1.49
TRADD-203ENST00000563348 RBM46Q8TBY0 533 aaKnown RBP24.33■■□□□ 1.49
TRADD-203ENST00000563348 JARID2Q92833 1246 aaPredicted RBP24.33■■□□□ 1.49
TRADD-203ENST00000563348 POTECB2RU33 542 aa24.32■■□□□ 1.48
TRADD-203ENST00000563348 DDNO94850 711 aaPredicted RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms