RNA–Protein interactions for RNA: ENST00000563200.5

PPP4C-205, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 5

Gene PPP4C, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-205	ENST00000563200	SENP3-EIF4A1	A0A087X0R7	540 aa		28.27	■■■□□ 2.12
PPP4C-205	ENST00000563200	ALDH1B1	P30837	517 aa		28.27	■■■□□ 2.12
PPP4C-205	ENST00000563200	HSP90AB3P	Q58FF7	597 aa		28.27	■■■□□ 2.12
PPP4C-205	ENST00000563200	TCIRG1	Q13488	830 aa		28.26	■■■□□ 2.12
PPP4C-205	ENST00000563200	NCBP3	Q53F19	620 aa	Known RBP	28.26	■■■□□ 2.12
PPP4C-205	ENST00000563200	HOXA10	P31260	410 aa	Predicted RBP	28.26	■■■□□ 2.11
PPP4C-205	ENST00000563200	SLC10A5	Q5PT55	438 aa		28.26	■■■□□ 2.11
PPP4C-205	ENST00000563200	NLRP10	Q86W26	655 aa		28.26	■■■□□ 2.11
PPP4C-205	ENST00000563200	WWC1	Q8IX03	1113 aa		28.26	■■■□□ 2.11
PPP4C-205	ENST00000563200	UTP14A	Q9BVJ6	771 aa	Known RBP	28.26	■■■□□ 2.11
PPP4C-205	ENST00000563200	HYPK	Q9NX55	129 aa		28.26	■■■□□ 2.11
PPP4C-205	ENST00000563200	CCDC93	Q567U6	631 aa		28.25	■■■□□ 2.11
PPP4C-205	ENST00000563200	C3orf67	Q6ZVT6	689 aa		28.25	■■■□□ 2.11
PPP4C-205	ENST00000563200	C8orf58	Q8NAV2	365 aa		28.25	■■■□□ 2.11
PPP4C-205	ENST00000563200	PLBD2	Q8NHP8	589 aa		28.25	■■■□□ 2.11
PPP4C-205	ENST00000563200	RNF123	Q5XPI4	1314 aa		28.24	■■■□□ 2.11
PPP4C-205	ENST00000563200	TOMM70	O94826	608 aa		28.24	■■■□□ 2.11
PPP4C-205	ENST00000563200	OLFM4	Q6UX06	510 aa		28.24	■■■□□ 2.11
PPP4C-205	ENST00000563200	SNED1	Q8TER0	1413 aa		28.24	■■■□□ 2.11
PPP4C-205	ENST00000563200	GLTPD2	A6NH11	291 aa		28.23	■■■□□ 2.11
PPP4C-205	ENST00000563200	ELL2	O00472	640 aa	Predicted RBP	28.23	■■■□□ 2.11
PPP4C-205	ENST00000563200	ANKRD13D	Q6ZTN6	518 aa		28.23	■■■□□ 2.11
PPP4C-205	ENST00000563200	RRAGC	Q9HB90	399 aa		28.21	■■■□□ 2.11
PPP4C-205	ENST00000563200	RPGR	Q92834	1020 aa	Known RBP	28.2	■■■□□ 2.11
PPP4C-205	ENST00000563200	CRAMP1	Q96RY5	1269 aa		28.2	■■■□□ 2.11
PPP4C-205	ENST00000563200	LAMB2	P55268	1798 aa		28.2	■■■□□ 2.1
PPP4C-205	ENST00000563200	RTKN2	Q8IZC4	609 aa		28.19	■■■□□ 2.1
PPP4C-205	ENST00000563200	TSPYL6	Q8N831	410 aa		28.19	■■■□□ 2.1
PPP4C-205	ENST00000563200	NLRP3	Q96P20	1036 aa		28.19	■■■□□ 2.1
PPP4C-205	ENST00000563200	ISCA1	Q9BUE6	129 aa		28.19	■■■□□ 2.1
PPP4C-205	ENST00000563200	FKBP4	Q02790	459 aa	Known RBP eCLIP	28.18	■■■□□ 2.1
PPP4C-205	ENST00000563200	SYNE4	Q8N205	404 aa		28.18	■■■□□ 2.1
PPP4C-205	ENST00000563200	TSR2	Q969E8	191 aa	Known RBP	28.18	■■■□□ 2.1
PPP4C-205	ENST00000563200	IL16	Q14005	1332 aa		28.18	■■■□□ 2.1
PPP4C-205	ENST00000563200	RBM17	Q96I25	401 aa	Known RBP	28.18	■■■□□ 2.1
PPP4C-205	ENST00000563200	PHAX	Q9H814	394 aa	Known RBP	28.18	■■■□□ 2.1
PPP4C-205	ENST00000563200	HSPA6	P17066	643 aa		28.17	■■■□□ 2.1
PPP4C-205	ENST00000563200	TRMT112	Q9UI30	125 aa	Known RBP	28.17	■■■□□ 2.1
PPP4C-205	ENST00000563200	WDR90	Q96KV7	1748 aa		28.16	■■■□□ 2.1
PPP4C-205	ENST00000563200	RBM46	Q8TBY0	533 aa	Known RBP	28.16	■■■□□ 2.1
PPP4C-205	ENST00000563200	SH3TC1	Q8TE82	1336 aa		28.15	■■■□□ 2.1
PPP4C-205	ENST00000563200	TRIM28	Q13263	835 aa	Known RBP	28.15	■■■□□ 2.1
PPP4C-205	ENST00000563200	POTEC	B2RU33	542 aa		28.14	■■■□□ 2.1
PPP4C-205	ENST00000563200	HCLS1	P14317	486 aa	Predicted RBP	28.14	■■■□□ 2.1
PPP4C-205	ENST00000563200	CC2D2B	Q6DHV5	1058 aa		28.14	■■■□□ 2.1
PPP4C-205	ENST00000563200	DPY19L2	Q6NUT2	758 aa		28.14	■■■□□ 2.1
PPP4C-205	ENST00000563200	ZNF277	Q9NRM2	450 aa	Predicted RBP	28.14	■■■□□ 2.1
PPP4C-205	ENST00000563200	DDX60	Q8IY21	1712 aa	Known RBP	28.13	■■■□□ 2.09
PPP4C-205	ENST00000563200	ATP5J2-PTCD1	G3V325	749 aa		28.13	■■■□□ 2.09
PPP4C-205	ENST00000563200	CCDC30	Q5VVM6	783 aa		28.13	■■■□□ 2.09
PPP4C-205	ENST00000563200	SLC51A	Q86UW1	340 aa		28.13	■■■□□ 2.09
PPP4C-205	ENST00000563200	PSMD1	Q99460	953 aa		28.13	■■■□□ 2.09
PPP4C-205	ENST00000563200	CHMP4A	Q9BY43	222 aa		28.13	■■■□□ 2.09
PPP4C-205	ENST00000563200	VEGFA	P15692	232 aa	Predicted RBP	28.12	■■■□□ 2.09
PPP4C-205	ENST00000563200	PPEF1	O14829	653 aa	Predicted RBP	28.11	■■■□□ 2.09
PPP4C-205	ENST00000563200	C16orf71	Q8IYS4	520 aa	Predicted RBP	28.11	■■■□□ 2.09
PPP4C-205	ENST00000563200	ZNF428	Q96B54	188 aa		28.11	■■■□□ 2.09
PPP4C-205	ENST00000563200	GOLGA2	Q08379	1002 aa		28.1	■■■□□ 2.09
PPP4C-205	ENST00000563200	GRIPAP1	Q4V328	841 aa		28.1	■■■□□ 2.09
PPP4C-205	ENST00000563200	ABCC4	O15439	1325 aa		28.1	■■■□□ 2.09
PPP4C-205	ENST00000563200	RIC3	Q7Z5B4	369 aa		28.09	■■■□□ 2.09
PPP4C-205	ENST00000563200	WDR63	Q8IWG1	891 aa		28.09	■■■□□ 2.09
PPP4C-205	ENST00000563200	IARS	P41252	1262 aa	Known RBP	28.09	■■■□□ 2.09
PPP4C-205	ENST00000563200	FAM89A	Q96GI7	184 aa		28.09	■■■□□ 2.09
PPP4C-205	ENST00000563200	FSTL1	Q12841	308 aa		28.08	■■■□□ 2.09
PPP4C-205	ENST00000563200	TWISTNB	Q3B726	338 aa	Predicted RBP	28.08	■■■□□ 2.09
PPP4C-205	ENST00000563200	FAM9B	Q8IZU0	186 aa		28.08	■■■□□ 2.09
PPP4C-205	ENST00000563200	SALL2	Q9Y467	1007 aa	Predicted RBP	28.08	■■■□□ 2.09
PPP4C-205	ENST00000563200	ATP6V0A2	Q9Y487	856 aa		28.08	■■■□□ 2.09
PPP4C-205	ENST00000563200	FANCI	Q9NVI1	1328 aa		28.08	■■■□□ 2.09
PPP4C-205	ENST00000563200	TAF1	P21675	1872 aa		28.07	■■■□□ 2.08
PPP4C-205	ENST00000563200	DDN	O94850	711 aa	Predicted RBP	28.07	■■■□□ 2.08
PPP4C-205	ENST00000563200	COL4A5	P29400	1685 aa		28.06	■■■□□ 2.08
PPP4C-205	ENST00000563200	TCERG1	O14776	1098 aa	Known RBP	28.05	■■■□□ 2.08
PPP4C-205	ENST00000563200	BBOX1	O75936	387 aa		28.05	■■■□□ 2.08
PPP4C-205	ENST00000563200	FZD9	O00144	591 aa		28.04	■■■□□ 2.08
PPP4C-205	ENST00000563200	SF3B3	Q15393	1217 aa	Known RBP	28.04	■■■□□ 2.08
PPP4C-205	ENST00000563200	ZNF541	Q9H0D2	1346 aa		28.03	■■■□□ 2.08
PPP4C-205	ENST00000563200	DDX58	O95786	925 aa	Known RBP	28.03	■■■□□ 2.08
PPP4C-205	ENST00000563200	DDX46	Q7L014	1031 aa	Known RBP	28.03	■■■□□ 2.08
PPP4C-205	ENST00000563200	MYD88	Q99836	296 aa		28.03	■■■□□ 2.08
PPP4C-205	ENST00000563200	METTL22	Q9BUU2	404 aa	Predicted RBP	28.03	■■■□□ 2.08
PPP4C-205	ENST00000563200	GRAP	Q13588	217 aa		28.02	■■■□□ 2.08
PPP4C-205	ENST00000563200	SP8	Q8IXZ3	490 aa		28.02	■■■□□ 2.08
PPP4C-205	ENST00000563200	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	28.02	■■■□□ 2.08
PPP4C-205	ENST00000563200	CCDC191	Q8NCU4	936 aa		28.02	■■■□□ 2.08
PPP4C-205	ENST00000563200	SMC1B	Q8NDV3	1235 aa		28.02	■■■□□ 2.08
PPP4C-205	ENST00000563200	GRAPL	Q8TC17	118 aa	Predicted RBP	28.02	■■■□□ 2.08
PPP4C-205	ENST00000563200	L3MBTL3	Q96JM7	780 aa	Predicted RBP	28.02	■■■□□ 2.08
PPP4C-205	ENST00000563200	STK31	Q9BXU1	1019 aa		28.02	■■■□□ 2.08
PPP4C-205	ENST00000563200	SPINK5	Q9NQ38	1064 aa	Predicted RBP	28.02	■■■□□ 2.08
PPP4C-205	ENST00000563200	CACNA1F	O60840	1977 aa		28.01	■■■□□ 2.08
PPP4C-205	ENST00000563200	APLP1	P51693	650 aa		28.01	■■■□□ 2.08
PPP4C-205	ENST00000563200	SCN4A	P35499	1836 aa		28.01	■■■□□ 2.07
PPP4C-205	ENST00000563200	IRS4	O14654	1257 aa	Predicted RBP	28.01	■■■□□ 2.07
PPP4C-205	ENST00000563200	RTL5	Q5HYW3	569 aa	Predicted RBP	28.01	■■■□□ 2.07
PPP4C-205	ENST00000563200	KSR2	Q6VAB6	950 aa		28.01	■■■□□ 2.07
PPP4C-205	ENST00000563200	MAP3K2	Q9Y2U5	619 aa		28.01	■■■□□ 2.07
PPP4C-205	ENST00000563200	LRRC37A	A6NMS7	1700 aa		28	■■■□□ 2.07
PPP4C-205	ENST00000563200	G2E3	Q7L622	706 aa		28	■■■□□ 2.07

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms