RNA–Protein interactions for RNA: ENST00000563009.5

EDC3-206, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-206ENST00000563009 RIC1Q4ADV7 1423 aa19.41■□□□□ 0.7
EDC3-206ENST00000563009 KIF16BQ96L93 1317 aa19.4■□□□□ 0.7
EDC3-206ENST00000563009 ABCC12Q96J65 1359 aa19.4■□□□□ 0.7
EDC3-206ENST00000563009 NEURL1BA8MQ27 555 aa19.39■□□□□ 0.69
EDC3-206ENST00000563009 NPHP1O15259 732 aa19.39■□□□□ 0.69
EDC3-206ENST00000563009 BCAR3O75815 825 aa19.39■□□□□ 0.69
EDC3-206ENST00000563009 ERFEQ4G0M1 354 aa19.39■□□□□ 0.69
EDC3-206ENST00000563009 NUTM1Q86Y26 1132 aa19.39■□□□□ 0.69
EDC3-206ENST00000563009 CCDC24Q8N4L8 307 aa19.39■□□□□ 0.69
EDC3-206ENST00000563009 LINS1Q8NG48 757 aa19.39■□□□□ 0.69
EDC3-206ENST00000563009 CWC25Q9NXE8 425 aaPredicted RBP19.39■□□□□ 0.69
EDC3-206ENST00000563009 NOB1Q9ULX3 412 aaKnown RBP19.39■□□□□ 0.69
EDC3-206ENST00000563009 GTF2E1P29083 439 aaPredicted RBP19.38■□□□□ 0.69
EDC3-206ENST00000563009 PDE6BP35913 854 aa19.38■□□□□ 0.69
EDC3-206ENST00000563009 SLC10A5Q5PT55 438 aa19.38■□□□□ 0.69
EDC3-206ENST00000563009 BEND3Q5T5X7 828 aa19.38■□□□□ 0.69
EDC3-206ENST00000563009 N4BP2Q86UW6 1770 aaPredicted RBP19.38■□□□□ 0.69
EDC3-206ENST00000563009 SH3TC1Q8TE82 1336 aa19.38■□□□□ 0.69
EDC3-206ENST00000563009 ARHGAP45Q92619 1136 aa19.38■□□□□ 0.69
EDC3-206ENST00000563009 TRMT112Q9UI30 125 aaKnown RBP19.38■□□□□ 0.69
EDC3-206ENST00000563009 DLEC1Q9Y238 1755 aa19.37■□□□□ 0.69
EDC3-206ENST00000563009 TNRC6CQ9HCJ0 1690 aaKnown RBP19.37■□□□□ 0.69
EDC3-206ENST00000563009 KLRG2A4D1S0 409 aaPredicted RBP19.37■□□□□ 0.69
EDC3-206ENST00000563009 CWF19L2Q2TBE0 894 aaKnown RBP19.37■□□□□ 0.69
EDC3-206ENST00000563009 PDZRN3Q9UPQ7 1066 aa19.37■□□□□ 0.69
EDC3-206ENST00000563009 COL11A2P13942 1736 aaPredicted RBP19.37■□□□□ 0.69
EDC3-206ENST00000563009 DPEP1P16444 411 aa19.36■□□□□ 0.69
EDC3-206ENST00000563009 KCNA3P22001 575 aa19.36■□□□□ 0.69
EDC3-206ENST00000563009 ZBTB38Q8NAP3 1195 aaPredicted RBP19.36■□□□□ 0.69
EDC3-206ENST00000563009 BRCA1P38398 1863 aaKnown RBP19.36■□□□□ 0.69
EDC3-206ENST00000563009 DDX60Q8IY21 1712 aaKnown RBP19.35■□□□□ 0.69
EDC3-206ENST00000563009 A0A0G2JLW4 131 aa19.35■□□□□ 0.69
EDC3-206ENST00000563009 PCCAP05165 728 aaPredicted RBP19.35■□□□□ 0.69
EDC3-206ENST00000563009 SYNE4Q8N205 404 aa19.35■□□□□ 0.69
EDC3-206ENST00000563009 FAM89AQ96GI7 184 aa19.35■□□□□ 0.69
EDC3-206ENST00000563009 API5Q9BZZ5 524 aaKnown RBP19.35■□□□□ 0.69
EDC3-206ENST00000563009 LAMB2P55268 1798 aa19.34■□□□□ 0.69
EDC3-206ENST00000563009 IPO8O15397 1037 aaKnown RBP19.34■□□□□ 0.69
EDC3-206ENST00000563009 CHRNA5P30532 468 aa19.34■□□□□ 0.69
EDC3-206ENST00000563009 GCKRQ14397 625 aa19.34■□□□□ 0.69
EDC3-206ENST00000563009 CRY2Q49AN0 593 aa19.34■□□□□ 0.69
EDC3-206ENST00000563009 SLC4A10Q6U841 1118 aa19.34■□□□□ 0.69
EDC3-206ENST00000563009 C2CD5Q86YS7 1000 aa19.34■□□□□ 0.69
EDC3-206ENST00000563009 H0YIN7 160 aa19.33■□□□□ 0.68
EDC3-206ENST00000563009 ALDH1L1O75891 902 aa19.33■□□□□ 0.68
EDC3-206ENST00000563009 SRCIN1Q9C0H9 1055 aa19.33■□□□□ 0.68
EDC3-206ENST00000563009 RCAN3Q9UKA8 241 aa19.33■□□□□ 0.68
EDC3-206ENST00000563009 CDHR2Q9BYE9 1310 aa19.32■□□□□ 0.68
EDC3-206ENST00000563009 H7C1W4 665 aa19.32■□□□□ 0.68
EDC3-206ENST00000563009 SRGNP10124 158 aa19.32■□□□□ 0.68
EDC3-206ENST00000563009 ATF7IPQ6VMQ6 1270 aa19.32■□□□□ 0.68
EDC3-206ENST00000563009 GOLGB1Q14789 3259 aaKnown RBP19.31■□□□□ 0.68
EDC3-206ENST00000563009 IRS4O14654 1257 aaPredicted RBP19.31■□□□□ 0.68
EDC3-206ENST00000563009 HCLS1P14317 486 aaPredicted RBP19.31■□□□□ 0.68
EDC3-206ENST00000563009 TRIM27P14373 513 aa19.31■□□□□ 0.68
EDC3-206ENST00000563009 RTL5Q5HYW3 569 aaPredicted RBP19.31■□□□□ 0.68
EDC3-206ENST00000563009 C3orf67Q6ZVT6 689 aa19.31■□□□□ 0.68
EDC3-206ENST00000563009 FRAT1Q92837 279 aaPredicted RBP19.31■□□□□ 0.68
EDC3-206ENST00000563009 NLRP3Q96P20 1036 aa19.31■□□□□ 0.68
EDC3-206ENST00000563009 ABCC4O15439 1325 aa19.3■□□□□ 0.68
EDC3-206ENST00000563009 HSP90B1P14625 803 aaKnown RBP19.3■□□□□ 0.68
EDC3-206ENST00000563009 CASP7P55210 303 aa19.3■□□□□ 0.68
EDC3-206ENST00000563009 ZKSCAN2Q63HK3 967 aa19.3■□□□□ 0.68
EDC3-206ENST00000563009 STYK1Q6J9G0 422 aa19.3■□□□□ 0.68
EDC3-206ENST00000563009 PIM2Q9P1W9 311 aa19.3■□□□□ 0.68
EDC3-206ENST00000563009 NPR1P16066 1061 aa19.29■□□□□ 0.68
EDC3-206ENST00000563009 CCT4P50991 539 aaKnown RBP19.29■□□□□ 0.68
EDC3-206ENST00000563009 JARID2Q92833 1246 aaPredicted RBP19.29■□□□□ 0.68
EDC3-206ENST00000563009 MASTLQ96GX5 879 aa19.29■□□□□ 0.68
EDC3-206ENST00000563009 GRM8O00222 908 aa19.28■□□□□ 0.68
EDC3-206ENST00000563009 HOXA10P31260 410 aaPredicted RBP19.28■□□□□ 0.68
EDC3-206ENST00000563009 UBE3BQ7Z3V4 1068 aa19.28■□□□□ 0.68
EDC3-206ENST00000563009 UTYO14607 1347 aa19.27■□□□□ 0.68
EDC3-206ENST00000563009 PDE8AO60658 829 aa19.27■□□□□ 0.68
EDC3-206ENST00000563009 SF3B3Q15393 1217 aaKnown RBP19.27■□□□□ 0.68
EDC3-206ENST00000563009 INTS3Q68E01 1043 aaKnown RBP19.27■□□□□ 0.68
EDC3-206ENST00000563009 PLA2G12BQ9BX93 195 aa19.27■□□□□ 0.68
EDC3-206ENST00000563009 ARFGEF1Q9Y6D6 1849 aa19.26■□□□□ 0.67
EDC3-206ENST00000563009 YBX3P16989 372 aaKnown RBP eCLIP19.26■□□□□ 0.67
EDC3-206ENST00000563009 DALRD3Q5D0E6 543 aaKnown RBP19.26■□□□□ 0.67
EDC3-206ENST00000563009 TTLL6Q8N841 843 aa19.26■□□□□ 0.67
EDC3-206ENST00000563009 RPGRQ92834 1020 aaKnown RBP19.26■□□□□ 0.67
EDC3-206ENST00000563009 CNKSR1Q969H4 720 aa19.26■□□□□ 0.67
EDC3-206ENST00000563009 ZNF622Q969S3 477 aaKnown RBP eCLIP19.26■□□□□ 0.67
EDC3-206ENST00000563009 C9orf78Q9NZ63 289 aaPredicted RBP19.26■□□□□ 0.67
EDC3-206ENST00000563009 TNNQ9UQP3 1299 aa19.26■□□□□ 0.67
EDC3-206ENST00000563009 MYH3P11055 1940 aa19.25■□□□□ 0.67
EDC3-206ENST00000563009 CRAMP1Q96RY5 1269 aa19.25■□□□□ 0.67
EDC3-206ENST00000563009 SLX4Q8IY92 1834 aa19.24■□□□□ 0.67
EDC3-206ENST00000563009 ALDH1B1P30837 517 aa19.24■□□□□ 0.67
EDC3-206ENST00000563009 RBM17Q96I25 401 aaKnown RBP19.24■□□□□ 0.67
EDC3-206ENST00000563009 USP44Q9H0E7 712 aa19.24■□□□□ 0.67
EDC3-206ENST00000563009 WWC3Q9ULE0 1092 aa19.24■□□□□ 0.67
EDC3-206ENST00000563009 BCS1LQ9Y276 419 aa19.24■□□□□ 0.67
EDC3-206ENST00000563009 UTRNP46939 3433 aa19.23■□□□□ 0.67
EDC3-206ENST00000563009 CACNA1SQ13698 1873 aa19.23■□□□□ 0.67
EDC3-206ENST00000563009 NBPF7P0C2Y1 421 aaPredicted RBP19.23■□□□□ 0.67
EDC3-206ENST00000563009 CTSWP56202 376 aa19.23■□□□□ 0.67
EDC3-206ENST00000563009 GPR162Q16538 588 aa19.23■□□□□ 0.67
EDC3-206ENST00000563009 PRPF40BQ6NWY9 871 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms