RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 ADAMTSL1Q8N6G6 1762 aa21.45■■□□□ 1.02
CDT1-202ENST00000562747 KLRG2A4D1S0 409 aaPredicted RBP21.44■■□□□ 1.02
CDT1-202ENST00000562747 SOGA3Q5TF21 947 aa21.44■■□□□ 1.02
CDT1-202ENST00000562747 HDGFL1Q5TGJ6 251 aa21.44■■□□□ 1.02
CDT1-202ENST00000562747 KIF6Q6ZMV9 814 aa21.44■■□□□ 1.02
CDT1-202ENST00000562747 DDX21Q9NR30 783 aaKnown RBP eCLIP21.44■■□□□ 1.02
CDT1-202ENST00000562747 SALL2Q9Y467 1007 aaPredicted RBP21.44■■□□□ 1.02
CDT1-202ENST00000562747 ZNF541Q9H0D2 1346 aa21.44■■□□□ 1.02
CDT1-202ENST00000562747 NPR1P16066 1061 aa21.43■■□□□ 1.02
CDT1-202ENST00000562747 CCDC93Q567U6 631 aa21.43■■□□□ 1.02
CDT1-202ENST00000562747 NECTIN2Q92692 538 aa21.43■■□□□ 1.02
CDT1-202ENST00000562747 NIP7Q9Y221 180 aaKnown RBP eCLIP21.43■■□□□ 1.02
CDT1-202ENST00000562747 MAP3K15Q6ZN16 1313 aa21.43■■□□□ 1.02
CDT1-202ENST00000562747 FAM177BA6PVY3 158 aa21.42■■□□□ 1.02
CDT1-202ENST00000562747 HLFQ16534 295 aa21.42■■□□□ 1.02
CDT1-202ENST00000562747 TTLL7Q6ZT98 887 aa21.42■■□□□ 1.02
CDT1-202ENST00000562747 L3MBTL3Q96JM7 780 aaPredicted RBP21.42■■□□□ 1.02
CDT1-202ENST00000562747 CREBZFQ9NS37 354 aa21.42■■□□□ 1.02
CDT1-202ENST00000562747 MKRN1Q9UHC7 482 aaKnown RBP21.42■■□□□ 1.02
CDT1-202ENST00000562747 NUP98P52948 1817 aa21.41■■□□□ 1.02
CDT1-202ENST00000562747 SNED1Q8TER0 1413 aa21.41■■□□□ 1.02
CDT1-202ENST00000562747 PASKQ96RG2 1323 aa21.41■■□□□ 1.02
CDT1-202ENST00000562747 PROSER3Q2NL68 480 aa21.41■■□□□ 1.02
CDT1-202ENST00000562747 TSR2Q969E8 191 aaKnown RBP21.41■■□□□ 1.02
CDT1-202ENST00000562747 CHMP4AQ9BY43 222 aa21.41■■□□□ 1.02
CDT1-202ENST00000562747 ZNF277Q9NRM2 450 aaPredicted RBP21.41■■□□□ 1.02
CDT1-202ENST00000562747 DBF4Q9UBU7 674 aaPredicted RBP21.41■■□□□ 1.02
CDT1-202ENST00000562747 ABCC12Q96J65 1359 aa21.4■■□□□ 1.02
CDT1-202ENST00000562747 ANXA1P04083 346 aa21.4■■□□□ 1.02
CDT1-202ENST00000562747 FKBP4Q02790 459 aaKnown RBP eCLIP21.4■■□□□ 1.02
CDT1-202ENST00000562747 C8orf58Q8NAV2 365 aa21.4■■□□□ 1.02
CDT1-202ENST00000562747 TAF1DQ9H5J8 278 aaPredicted RBP21.4■■□□□ 1.02
CDT1-202ENST00000562747 CHPF2Q9P2E5 772 aa21.4■■□□□ 1.02
CDT1-202ENST00000562747 COL4A5P29400 1685 aa21.4■■□□□ 1.02
CDT1-202ENST00000562747 ELL2O00472 640 aaPredicted RBP21.38■■□□□ 1.01
CDT1-202ENST00000562747 TPTE2Q6XPS3 522 aa21.38■■□□□ 1.01
CDT1-202ENST00000562747 LDHDQ86WU2 507 aa21.38■■□□□ 1.01
CDT1-202ENST00000562747 MIER1Q8N108 512 aa21.38■■□□□ 1.01
CDT1-202ENST00000562747 ZBTB3Q9H5J0 574 aa21.38■■□□□ 1.01
CDT1-202ENST00000562747 CNTNAP1P78357 1384 aa21.37■■□□□ 1.01
CDT1-202ENST00000562747 IQCA1LA6NCM1 817 aa21.37■■□□□ 1.01
CDT1-202ENST00000562747 GIGYF2Q6Y7W6 1299 aaKnown RBP21.37■■□□□ 1.01
CDT1-202ENST00000562747 COPS6Q7L5N1 327 aa21.37■■□□□ 1.01
CDT1-202ENST00000562747 XAGE3Q8WTP9 111 aa21.37■■□□□ 1.01
CDT1-202ENST00000562747 HYPKQ9NX55 129 aa21.37■■□□□ 1.01
CDT1-202ENST00000562747 ZNF521Q96K83 1311 aa21.36■■□□□ 1.01
CDT1-202ENST00000562747 FANCIQ9NVI1 1328 aa21.36■■□□□ 1.01
CDT1-202ENST00000562747 LTBP1Q14766 1721 aa21.36■■□□□ 1.01
CDT1-202ENST00000562747 SLC51AQ86UW1 340 aa21.36■■□□□ 1.01
CDT1-202ENST00000562747 TSPYL6Q8N831 410 aa21.36■■□□□ 1.01
CDT1-202ENST00000562747 CCDC30Q5VVM6 783 aa21.35■■□□□ 1.01
CDT1-202ENST00000562747 NUTM1Q86Y26 1132 aa21.35■■□□□ 1.01
CDT1-202ENST00000562747 ITGBL1O95965 494 aaPredicted RBP21.34■■□□□ 1.01
CDT1-202ENST00000562747 GOLGA2Q08379 1002 aa21.34■■□□□ 1.01
CDT1-202ENST00000562747 AIMP1Q12904 312 aaKnown RBP21.34■■□□□ 1.01
CDT1-202ENST00000562747 TWISTNBQ3B726 338 aaPredicted RBP21.34■■□□□ 1.01
CDT1-202ENST00000562747 EAPPQ56P03 285 aaPredicted RBP21.34■■□□□ 1.01
CDT1-202ENST00000562747 RTKN2Q8IZC4 609 aa21.34■■□□□ 1.01
CDT1-202ENST00000562747 MYH16Q9H6N6 1097 aa21.34■■□□□ 1.01
CDT1-202ENST00000562747 RNF123Q5XPI4 1314 aa21.33■■□□□ 1.01
CDT1-202ENST00000562747 IARSP41252 1262 aaKnown RBP21.33■■□□□ 1.01
CDT1-202ENST00000562747 CRY2Q49AN0 593 aa21.33■■□□□ 1.01
CDT1-202ENST00000562747 ZNF34Q8IZ26 560 aa21.33■■□□□ 1.01
CDT1-202ENST00000562747 SYNE4Q8N205 404 aa21.33■■□□□ 1.01
CDT1-202ENST00000562747 HACL1Q9UJ83 578 aa21.33■■□□□ 1.01
CDT1-202ENST00000562747 UBN2Q6ZU65 1347 aa21.32■■□□□ 1
CDT1-202ENST00000562747 FZD9O00144 591 aa21.32■■□□□ 1
CDT1-202ENST00000562747 HSP90AB3PQ58FF7 597 aa21.32■■□□□ 1
CDT1-202ENST00000562747 NYXQ9GZU5 481 aa21.32■■□□□ 1
CDT1-202ENST00000562747 SPINK5Q9NQ38 1064 aaPredicted RBP21.32■■□□□ 1
CDT1-202ENST00000562747 IBTKQ9P2D0 1353 aaPredicted RBP21.32■■□□□ 1
CDT1-202ENST00000562747 RIC1Q4ADV7 1423 aa21.31■■□□□ 1
CDT1-202ENST00000562747 FOXN1O15353 648 aa21.31■■□□□ 1
CDT1-202ENST00000562747 ALDH1B1P30837 517 aa21.31■■□□□ 1
CDT1-202ENST00000562747 EPHX2P34913 555 aa21.31■■□□□ 1
CDT1-202ENST00000562747 PARP10Q53GL7 1025 aa21.31■■□□□ 1
CDT1-202ENST00000562747 PLBD2Q8NHP8 589 aa21.31■■□□□ 1
CDT1-202ENST00000562747 GPTP24298 496 aa21.3■■□□□ 1
CDT1-202ENST00000562747 GTF2E1P29083 439 aaPredicted RBP21.3■■□□□ 1
CDT1-202ENST00000562747 VEGFBP49765 207 aa21.3■■□□□ 1
CDT1-202ENST00000562747 ANKRD13DQ6ZTN6 518 aa21.3■■□□□ 1
CDT1-202ENST00000562747 ANKRD36CQ5JPF3 1778 aa21.3■■□□□ 1
CDT1-202ENST00000562747 EXOSC9Q06265 439 aaKnown RBP21.29■■□□□ 1
CDT1-202ENST00000562747 PSMD1Q99460 953 aa21.29■■□□□ 1
CDT1-202ENST00000562747 STK31Q9BXU1 1019 aa21.29■■□□□ 1
CDT1-202ENST00000562747 TMEM88BA6NKF7 163 aa21.28■■□□□ 1
CDT1-202ENST00000562747 TCIRG1Q13488 830 aa21.28■■□□□ 1
CDT1-202ENST00000562747 MAP1SQ66K74 1059 aaPredicted RBP21.28■■□□□ 1
CDT1-202ENST00000562747 PPP1R42Q7Z4L9 355 aa21.28■■□□□ 1
CDT1-202ENST00000562747 PHAXQ9H814 394 aaKnown RBP21.28■■□□□ 1
CDT1-202ENST00000562747 CLEC11AQ9Y240 323 aa21.28■■□□□ 1
CDT1-202ENST00000562747 VAMP4O75379 141 aa21.27■■□□□ 1
CDT1-202ENST00000562747 SUSD4Q5VX71 490 aa21.27■■□□□ 1
CDT1-202ENST00000562747 C3orf67Q6ZVT6 689 aa21.27■■□□□ 1
CDT1-202ENST00000562747 GPC2Q8N158 579 aa21.27■■□□□ 1
CDT1-202ENST00000562747 E9PSI1 815 aa21.26■□□□□ 0.99
CDT1-202ENST00000562747 NTSR2O95665 410 aa21.26■□□□□ 0.99
CDT1-202ENST00000562747 LAMB2P55268 1798 aa21.25■□□□□ 0.99
CDT1-202ENST00000562747 DDX58O95786 925 aaKnown RBP21.25■□□□□ 0.99
CDT1-202ENST00000562747 HOXA10P31260 410 aaPredicted RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 167.9 ms