RNA–Protein interactions for RNA: ENST00000562515.2

AC055876.4-201, humanhuman

BASIC

Gene AC055876.4, Length 712 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.4-201ENST00000562515 LAMB2P55268 1798 aa12.58□□□□□ -0.39
AC055876.4-201ENST00000562515 IBTKQ9P2D0 1353 aaPredicted RBP12.58□□□□□ -0.4
AC055876.4-201ENST00000562515 PCNTO95613 3336 aa12.58□□□□□ -0.4
AC055876.4-201ENST00000562515 KLRG2A4D1S0 409 aaPredicted RBP12.58□□□□□ -0.4
AC055876.4-201ENST00000562515 TMEM88BA6NKF7 163 aa12.58□□□□□ -0.4
AC055876.4-201ENST00000562515 ERVV-1B6SEH8 477 aa12.58□□□□□ -0.4
AC055876.4-201ENST00000562515 C7orf43Q8WVR3 580 aa12.58□□□□□ -0.4
AC055876.4-201ENST00000562515 TRPM7Q96QT4 1865 aa12.58□□□□□ -0.4
AC055876.4-201ENST00000562515 PASKQ96RG2 1323 aa12.58□□□□□ -0.4
AC055876.4-201ENST00000562515 RIC1Q4ADV7 1423 aa12.57□□□□□ -0.4
AC055876.4-201ENST00000562515 TCERG1O14776 1098 aaKnown RBP12.57□□□□□ -0.4
AC055876.4-201ENST00000562515 PPEF1O14829 653 aaPredicted RBP12.57□□□□□ -0.4
AC055876.4-201ENST00000562515 NFE2L2Q16236 605 aa12.57□□□□□ -0.4
AC055876.4-201ENST00000562515 CC2D2BQ6DHV5 1058 aa12.57□□□□□ -0.4
AC055876.4-201ENST00000562515 PAXIP1Q6ZW49 1069 aaPredicted RBP12.57□□□□□ -0.4
AC055876.4-201ENST00000562515 GPC2Q8N158 579 aa12.57□□□□□ -0.4
AC055876.4-201ENST00000562515 LARGE2Q8N3Y3 721 aa12.57□□□□□ -0.4
AC055876.4-201ENST00000562515 RBM17Q96I25 401 aaKnown RBP12.57□□□□□ -0.4
AC055876.4-201ENST00000562515 PSMD1Q99460 953 aa12.57□□□□□ -0.4
AC055876.4-201ENST00000562515 THUMPD2Q9BTF0 503 aaKnown RBP12.57□□□□□ -0.4
AC055876.4-201ENST00000562515 TSPYL4Q9UJ04 414 aa12.57□□□□□ -0.4
AC055876.4-201ENST00000562515 ABT1Q9ULW3 272 aaKnown RBP12.57□□□□□ -0.4
AC055876.4-201ENST00000562515 EIF4A1P60842 406 aaKnown RBP12.56□□□□□ -0.4
AC055876.4-201ENST00000562515 MAP1SQ66K74 1059 aaPredicted RBP12.56□□□□□ -0.4
AC055876.4-201ENST00000562515 TTLL7Q6ZT98 887 aa12.56□□□□□ -0.4
AC055876.4-201ENST00000562515 PPP1R42Q7Z4L9 355 aa12.56□□□□□ -0.4
AC055876.4-201ENST00000562515 LTBP1Q14766 1721 aa12.56□□□□□ -0.4
AC055876.4-201ENST00000562515 UBN2Q6ZU65 1347 aa12.56□□□□□ -0.4
AC055876.4-201ENST00000562515 FZD9O00144 591 aa12.55□□□□□ -0.4
AC055876.4-201ENST00000562515 FOXN1O15353 648 aa12.55□□□□□ -0.4
AC055876.4-201ENST00000562515 CRY2Q49AN0 593 aa12.55□□□□□ -0.4
AC055876.4-201ENST00000562515 GRIPAP1Q4V328 841 aa12.55□□□□□ -0.4
AC055876.4-201ENST00000562515 NIM1KQ8IY84 436 aa12.55□□□□□ -0.4
AC055876.4-201ENST00000562515 ERBB4Q15303 1308 aa12.55□□□□□ -0.4
AC055876.4-201ENST00000562515 COL4A5P29400 1685 aa12.54□□□□□ -0.4
AC055876.4-201ENST00000562515 PPIP5K2O43314 1243 aa12.54□□□□□ -0.4
AC055876.4-201ENST00000562515 EIF2S2P20042 333 aaKnown RBP12.54□□□□□ -0.4
AC055876.4-201ENST00000562515 CTCFP49711 727 aaPredicted RBP12.54□□□□□ -0.4
AC055876.4-201ENST00000562515 VEGFBP49765 207 aa12.54□□□□□ -0.4
AC055876.4-201ENST00000562515 SUSD4Q5VX71 490 aa12.54□□□□□ -0.4
AC055876.4-201ENST00000562515 CNTROBQ8N137 903 aa12.54□□□□□ -0.4
AC055876.4-201ENST00000562515 SNED1Q8TER0 1413 aa12.54□□□□□ -0.4
AC055876.4-201ENST00000562515 NTSR2O95665 410 aa12.53□□□□□ -0.4
AC055876.4-201ENST00000562515 LMOD3Q0VAK6 560 aa12.53□□□□□ -0.4
AC055876.4-201ENST00000562515 GRM1Q13255 1194 aa12.53□□□□□ -0.4
AC055876.4-201ENST00000562515 DEFB115Q30KQ5 88 aa12.53□□□□□ -0.4
AC055876.4-201ENST00000562515 PARP10Q53GL7 1025 aa12.53□□□□□ -0.4
AC055876.4-201ENST00000562515 GIGYF2Q6Y7W6 1299 aaKnown RBP12.53□□□□□ -0.4
AC055876.4-201ENST00000562515 NLRP3Q96P20 1036 aa12.53□□□□□ -0.4
AC055876.4-201ENST00000562515 THSD7BQ9C0I4 1608 aa12.52□□□□□ -0.4
AC055876.4-201ENST00000562515 ITGBL1O95965 494 aaPredicted RBP12.52□□□□□ -0.41
AC055876.4-201ENST00000562515 CRAMP1Q96RY5 1269 aa12.52□□□□□ -0.41
AC055876.4-201ENST00000562515 PLEKHF1Q96S99 279 aa12.52□□□□□ -0.41
AC055876.4-201ENST00000562515 UTP14AQ9BVJ6 771 aaKnown RBP12.52□□□□□ -0.41
AC055876.4-201ENST00000562515 HOXA10P31260 410 aaPredicted RBP12.51□□□□□ -0.41
AC055876.4-201ENST00000562515 HOXD11P31277 338 aaPredicted RBP12.51□□□□□ -0.41
AC055876.4-201ENST00000562515 RIPK4P57078 832 aa12.51□□□□□ -0.41
AC055876.4-201ENST00000562515 AOC3Q16853 763 aa12.51□□□□□ -0.41
AC055876.4-201ENST00000562515 HSP90AB3PQ58FF7 597 aa12.51□□□□□ -0.41
AC055876.4-201ENST00000562515 ZNF34Q8IZ26 560 aa12.51□□□□□ -0.41
AC055876.4-201ENST00000562515 SUPT20HQ8NEM7 779 aa12.51□□□□□ -0.41
AC055876.4-201ENST00000562515 NECTIN2Q92692 538 aa12.51□□□□□ -0.41
AC055876.4-201ENST00000562515 BEGAINQ9BUH8 593 aa12.51□□□□□ -0.41
AC055876.4-201ENST00000562515 PRDM10Q9NQV6 1147 aa12.51□□□□□ -0.41
AC055876.4-201ENST00000562515 RNF216Q9NWF9 866 aaPredicted RBP12.51□□□□□ -0.41
AC055876.4-201ENST00000562515 DDX60Q8IY21 1712 aaKnown RBP12.51□□□□□ -0.41
AC055876.4-201ENST00000562515 TAF1P21675 1872 aa12.51□□□□□ -0.41
AC055876.4-201ENST00000562515 RASSF10A6NK89 507 aa12.5□□□□□ -0.41
AC055876.4-201ENST00000562515 ANXA1P04083 346 aa12.5□□□□□ -0.41
AC055876.4-201ENST00000562515 SCNN1DP51172 638 aa12.5□□□□□ -0.41
AC055876.4-201ENST00000562515 AIMP1Q12904 312 aaKnown RBP12.5□□□□□ -0.41
AC055876.4-201ENST00000562515 DDX21Q9NR30 783 aaKnown RBP eCLIP12.5□□□□□ -0.41
AC055876.4-201ENST00000562515 ABCC4O15439 1325 aa12.5□□□□□ -0.41
AC055876.4-201ENST00000562515 WDR33Q9C0J8 1336 aaKnown RBP12.5□□□□□ -0.41
AC055876.4-201ENST00000562515 EPS15P42566 896 aa12.49□□□□□ -0.41
AC055876.4-201ENST00000562515 ECE1P42892 770 aa12.49□□□□□ -0.41
AC055876.4-201ENST00000562515 LBX1P52954 281 aa12.49□□□□□ -0.41
AC055876.4-201ENST00000562515 MAP2K1Q02750 393 aaPredicted RBP12.49□□□□□ -0.41
AC055876.4-201ENST00000562515 DPP8Q6V1X1 898 aaPredicted RBP12.49□□□□□ -0.41
AC055876.4-201ENST00000562515 USP50Q70EL3 339 aaPredicted RBP12.49□□□□□ -0.41
AC055876.4-201ENST00000562515 LRRC37AA6NMS7 1700 aa12.48□□□□□ -0.41
AC055876.4-201ENST00000562515 NEUROD2Q15784 382 aa12.48□□□□□ -0.41
AC055876.4-201ENST00000562515 C3orf67Q6ZVT6 689 aa12.48□□□□□ -0.41
AC055876.4-201ENST00000562515 DDX46Q7L014 1031 aaKnown RBP12.48□□□□□ -0.41
AC055876.4-201ENST00000562515 SLC51AQ86UW1 340 aa12.48□□□□□ -0.41
AC055876.4-201ENST00000562515 BCL2L13Q9BXK5 485 aa12.48□□□□□ -0.41
AC055876.4-201ENST00000562515 ATP6V0A2Q9Y487 856 aa12.48□□□□□ -0.41
AC055876.4-201ENST00000562515 LAS1LQ9Y4W2 734 aaKnown RBP12.48□□□□□ -0.41
AC055876.4-201ENST00000562515 PROSER3Q2NL68 480 aa12.47□□□□□ -0.41
AC055876.4-201ENST00000562515 XAGE3Q8WTP9 111 aa12.47□□□□□ -0.41
AC055876.4-201ENST00000562515 CAPNS2Q96L46 248 aa12.47□□□□□ -0.41
AC055876.4-201ENST00000562515 ZNF408Q9H9D4 720 aa12.47□□□□□ -0.41
AC055876.4-201ENST00000562515 ADARB2Q9NS39 739 aaKnown RBP12.47□□□□□ -0.41
AC055876.4-201ENST00000562515 WBP1LQ9NX94 342 aa12.47□□□□□ -0.41
AC055876.4-201ENST00000562515 TRMT112Q9UI30 125 aaKnown RBP12.47□□□□□ -0.41
AC055876.4-201ENST00000562515 SH3TC1Q8TE82 1336 aa12.46□□□□□ -0.41
AC055876.4-201ENST00000562515 HCLS1P14317 486 aaPredicted RBP12.46□□□□□ -0.41
AC055876.4-201ENST00000562515 WDR43Q15061 677 aaKnown RBP eCLIP12.46□□□□□ -0.41
AC055876.4-201ENST00000562515 CIAPIN1Q6FI81 312 aa12.46□□□□□ -0.41
AC055876.4-201ENST00000562515 COPS6Q7L5N1 327 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms