RNA–Protein interactions for RNA: ENST00000561904.5

E2F4-202, Transcript of E2F transcription factor 4, humanhuman

TSL 3

Gene E2F4, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F4-202ENST00000561904 HSPA1AP0DMV8 641 aaKnown RBP23.28■■□□□ 1.32
E2F4-202ENST00000561904 HSPA1BP0DMV9 641 aaKnown RBP23.28■■□□□ 1.32
E2F4-202ENST00000561904 GIGYF2Q6Y7W6 1299 aaKnown RBP23.28■■□□□ 1.32
E2F4-202ENST00000561904 LRP10Q7Z4F1 713 aa23.28■■□□□ 1.32
E2F4-202ENST00000561904 CCDC146Q8IYE0 955 aa23.28■■□□□ 1.32
E2F4-202ENST00000561904 TMPOP42166 694 aaKnown RBP23.27■■□□□ 1.32
E2F4-202ENST00000561904 NEUROD2Q15784 382 aa23.27■■□□□ 1.32
E2F4-202ENST00000561904 LDHDQ86WU2 507 aa23.27■■□□□ 1.32
E2F4-202ENST00000561904 ERBB4Q15303 1308 aa23.27■■□□□ 1.32
E2F4-202ENST00000561904 RNF123Q5XPI4 1314 aa23.27■■□□□ 1.32
E2F4-202ENST00000561904 IBTKQ9P2D0 1353 aaPredicted RBP23.27■■□□□ 1.31
E2F4-202ENST00000561904 FZD9O00144 591 aa23.26■■□□□ 1.31
E2F4-202ENST00000561904 DDX10Q13206 875 aaKnown RBP23.26■■□□□ 1.31
E2F4-202ENST00000561904 RALBP1Q15311 655 aa23.26■■□□□ 1.31
E2F4-202ENST00000561904 CREBZFQ9NS37 354 aa23.26■■□□□ 1.31
E2F4-202ENST00000561904 HOXA10P31260 410 aaPredicted RBP23.25■■□□□ 1.31
E2F4-202ENST00000561904 KRT24Q2M2I5 525 aa23.25■■□□□ 1.31
E2F4-202ENST00000561904 PSMD1Q99460 953 aa23.25■■□□□ 1.31
E2F4-202ENST00000561904 HACL1Q9UJ83 578 aa23.25■■□□□ 1.31
E2F4-202ENST00000561904 RIC1Q4ADV7 1423 aa23.25■■□□□ 1.31
E2F4-202ENST00000561904 EPHX2P34913 555 aa23.24■■□□□ 1.31
E2F4-202ENST00000561904 RBM17Q96I25 401 aaKnown RBP23.24■■□□□ 1.31
E2F4-202ENST00000561904 CLEC11AQ9Y240 323 aa23.24■■□□□ 1.31
E2F4-202ENST00000561904 PASKQ96RG2 1323 aa23.24■■□□□ 1.31
E2F4-202ENST00000561904 PPEF1O14829 653 aaPredicted RBP23.23■■□□□ 1.31
E2F4-202ENST00000561904 AIMP1Q12904 312 aaKnown RBP23.23■■□□□ 1.31
E2F4-202ENST00000561904 PPP1R42Q7Z4L9 355 aa23.23■■□□□ 1.31
E2F4-202ENST00000561904 JDP2Q8WYK2 163 aa23.23■■□□□ 1.31
E2F4-202ENST00000561904 ZNF428Q96B54 188 aa23.23■■□□□ 1.31
E2F4-202ENST00000561904 GJA3Q9Y6H8 435 aa23.23■■□□□ 1.31
E2F4-202ENST00000561904 ADAMTSL1Q8N6G6 1762 aa23.22■■□□□ 1.31
E2F4-202ENST00000561904 PARP10Q53GL7 1025 aa23.22■■□□□ 1.31
E2F4-202ENST00000561904 CRAMP1Q96RY5 1269 aa23.22■■□□□ 1.31
E2F4-202ENST00000561904 LAS1LQ9Y4W2 734 aaKnown RBP23.22■■□□□ 1.31
E2F4-202ENST00000561904 ITGBL1O95965 494 aaPredicted RBP23.21■■□□□ 1.31
E2F4-202ENST00000561904 COPS6Q7L5N1 327 aa23.21■■□□□ 1.31
E2F4-202ENST00000561904 XAGE3Q8WTP9 111 aa23.21■■□□□ 1.31
E2F4-202ENST00000561904 UTP14AQ9BVJ6 771 aaKnown RBP23.21■■□□□ 1.31
E2F4-202ENST00000561904 LTBP1Q14766 1721 aa23.21■■□□□ 1.31
E2F4-202ENST00000561904 ANKRD36CQ5JPF3 1778 aa23.2■■□□□ 1.3
E2F4-202ENST00000561904 MYBBP1AQ9BQG0 1328 aaKnown RBP23.2■■□□□ 1.3
E2F4-202ENST00000561904 CAPN15O75808 1086 aa23.2■■□□□ 1.3
E2F4-202ENST00000561904 LMOD3Q0VAK6 560 aa23.2■■□□□ 1.3
E2F4-202ENST00000561904 CC2D2BQ6DHV5 1058 aa23.2■■□□□ 1.3
E2F4-202ENST00000561904 GPC2Q8N158 579 aa23.2■■□□□ 1.3
E2F4-202ENST00000561904 LARGE2Q8N3Y3 721 aa23.2■■□□□ 1.3
E2F4-202ENST00000561904 NLRP3Q96P20 1036 aa23.2■■□□□ 1.3
E2F4-202ENST00000561904 LAMB2P55268 1798 aa23.19■■□□□ 1.3
E2F4-202ENST00000561904 EIF6P56537 245 aaKnown RBP23.19■■□□□ 1.3
E2F4-202ENST00000561904 MAP1SQ66K74 1059 aaPredicted RBP23.19■■□□□ 1.3
E2F4-202ENST00000561904 TNS4Q8IZW8 715 aa23.19■■□□□ 1.3
E2F4-202ENST00000561904 BABAM1Q9NWV8 329 aa23.19■■□□□ 1.3
E2F4-202ENST00000561904 HCLS1P14317 486 aaPredicted RBP23.18■■□□□ 1.3
E2F4-202ENST00000561904 TRIM35Q9UPQ4 493 aa23.18■■□□□ 1.3
E2F4-202ENST00000561904 CNTNAP1P78357 1384 aa23.17■■□□□ 1.3
E2F4-202ENST00000561904 ABCC4O15439 1325 aa23.17■■□□□ 1.3
E2F4-202ENST00000561904 SLC10A5Q5PT55 438 aa23.17■■□□□ 1.3
E2F4-202ENST00000561904 NLRP10Q86W26 655 aa23.17■■□□□ 1.3
E2F4-202ENST00000561904 TMEM88BA6NKF7 163 aa23.16■■□□□ 1.3
E2F4-202ENST00000561904 CHL1O00533 1208 aa23.16■■□□□ 1.3
E2F4-202ENST00000561904 AOC3Q16853 763 aa23.16■■□□□ 1.3
E2F4-202ENST00000561904 PNMA8AQ86V59 439 aaPredicted RBP23.16■■□□□ 1.3
E2F4-202ENST00000561904 CNTROBQ8N137 903 aa23.16■■□□□ 1.3
E2F4-202ENST00000561904 PPIP5K2O43314 1243 aa23.15■■□□□ 1.3
E2F4-202ENST00000561904 EPS15P42566 896 aa23.15■■□□□ 1.3
E2F4-202ENST00000561904 RUNDC1Q96C34 613 aa23.15■■□□□ 1.3
E2F4-202ENST00000561904 CHPF2Q9P2E5 772 aa23.15■■□□□ 1.3
E2F4-202ENST00000561904 ATP6V0A2Q9Y487 856 aa23.15■■□□□ 1.3
E2F4-202ENST00000561904 TAF1P21675 1872 aa23.15■■□□□ 1.3
E2F4-202ENST00000561904 VEGFBP49765 207 aa23.14■■□□□ 1.29
E2F4-202ENST00000561904 SCNN1DP51172 638 aa23.14■■□□□ 1.29
E2F4-202ENST00000561904 WDR43Q15061 677 aaKnown RBP eCLIP23.14■■□□□ 1.29
E2F4-202ENST00000561904 DDX21Q9NR30 783 aaKnown RBP eCLIP23.14■■□□□ 1.29
E2F4-202ENST00000561904 ADAMTS8Q9UP79 889 aa23.14■■□□□ 1.29
E2F4-202ENST00000561904 LMOD1P29536 600 aaPredicted RBP23.13■■□□□ 1.29
E2F4-202ENST00000561904 FMR1Q06787 632 aaKnown RBP eCLIP23.13■■□□□ 1.29
E2F4-202ENST00000561904 TCIRG1Q13488 830 aa23.13■■□□□ 1.29
E2F4-202ENST00000561904 GRIPAP1Q4V328 841 aa23.13■■□□□ 1.29
E2F4-202ENST00000561904 NIM1KQ8IY84 436 aa23.13■■□□□ 1.29
E2F4-202ENST00000561904 TRMT112Q9UI30 125 aaKnown RBP23.13■■□□□ 1.29
E2F4-202ENST00000561904 HSP90AB3PQ58FF7 597 aa23.12■■□□□ 1.29
E2F4-202ENST00000561904 TMX4Q9H1E5 349 aaPredicted RBP23.11■■□□□ 1.29
E2F4-202ENST00000561904 FOXN1O15353 648 aa23.1■■□□□ 1.29
E2F4-202ENST00000561904 HDGFL1Q5TGJ6 251 aa23.1■■□□□ 1.29
E2F4-202ENST00000561904 SH3TC1Q8TE82 1336 aa23.09■■□□□ 1.29
E2F4-202ENST00000561904 DPP8Q6V1X1 898 aaPredicted RBP23.09■■□□□ 1.29
E2F4-202ENST00000561904 DDX60Q8IY21 1712 aaKnown RBP23.08■■□□□ 1.29
E2F4-202ENST00000561904 ATP5J2-PTCD1G3V325 749 aa23.08■■□□□ 1.29
E2F4-202ENST00000561904 DDX46Q7L014 1031 aaKnown RBP23.08■■□□□ 1.29
E2F4-202ENST00000561904 SP8Q8IXZ3 490 aa23.08■■□□□ 1.29
E2F4-202ENST00000561904 BBOX1O75936 387 aa23.07■■□□□ 1.28
E2F4-202ENST00000561904 CXCL9Q07325 125 aa23.07■■□□□ 1.28
E2F4-202ENST00000561904 MPNDQ8N594 471 aa23.07■■□□□ 1.28
E2F4-202ENST00000561904 RTFDC1Q9BY42 306 aaPredicted RBP23.07■■□□□ 1.28
E2F4-202ENST00000561904 TRAF5O00463 557 aa23.06■■□□□ 1.28
E2F4-202ENST00000561904 GRAPQ13588 217 aa23.06■■□□□ 1.28
E2F4-202ENST00000561904 RTL5Q5HYW3 569 aaPredicted RBP23.06■■□□□ 1.28
E2F4-202ENST00000561904 PLBD2Q8NHP8 589 aa23.06■■□□□ 1.28
E2F4-202ENST00000561904 GRAPLQ8TC17 118 aaPredicted RBP23.06■■□□□ 1.28
E2F4-202ENST00000561904 FAM89AQ96GI7 184 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms