RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 CCER1Q8TC90 406 aaPredicted RBP8.86□□□□□ -0.99
USP8-218ENST00000561330 PRR12Q9ULL5 1215 aa8.86□□□□□ -0.99
USP8-218ENST00000561330 SERPINB4P48594 390 aa8.85□□□□□ -0.99
USP8-218ENST00000561330 SPEM2Q0P670 501 aa8.85□□□□□ -0.99
USP8-218ENST00000561330 SF3B2Q13435 895 aaKnown RBP8.85□□□□□ -0.99
USP8-218ENST00000561330 MTMR3Q13615 1198 aa8.85□□□□□ -0.99
USP8-218ENST00000561330 FAM26DQ5JW98 314 aa8.85□□□□□ -0.99
USP8-218ENST00000561330 TXNDC2Q86VQ3 553 aa8.85□□□□□ -0.99
USP8-218ENST00000561330 FAM13BQ9NYF5 915 aa8.85□□□□□ -0.99
USP8-218ENST00000561330 ZBTB39O15060 712 aa8.84□□□□□ -0.99
USP8-218ENST00000561330 ZAP70P43403 619 aa8.84□□□□□ -0.99
USP8-218ENST00000561330 FKBP4Q02790 459 aaKnown RBP eCLIP8.84□□□□□ -0.99
USP8-218ENST00000561330 ZNF211Q13398 564 aaPredicted RBP8.84□□□□□ -0.99
USP8-218ENST00000561330 GRIN2CQ14957 1233 aa8.84□□□□□ -0.99
USP8-218ENST00000561330 RGL4Q8IZJ4 473 aa8.84□□□□□ -0.99
USP8-218ENST00000561330 OXCT2Q9BYC2 517 aaPredicted RBP8.84□□□□□ -0.99
USP8-218ENST00000561330 ANO2Q9NQ90 1003 aa8.84□□□□□ -0.99
USP8-218ENST00000561330 EGFL7Q9UHF1 273 aa8.84□□□□□ -0.99
USP8-218ENST00000561330 RTCBQ9Y3I0 505 aaKnown RBP8.84□□□□□ -0.99
USP8-218ENST00000561330 ARAFP10398 606 aa8.83□□□□□ -1
USP8-218ENST00000561330 MPSTP25325 297 aa8.83□□□□□ -1
USP8-218ENST00000561330 NEUROD1Q13562 356 aa8.83□□□□□ -1
USP8-218ENST00000561330 NOM1Q5C9Z4 860 aaKnown RBP8.83□□□□□ -1
USP8-218ENST00000561330 SLC30A3Q99726 388 aa8.83□□□□□ -1
USP8-218ENST00000561330 FAM13AO94988 1023 aa8.82□□□□□ -1
USP8-218ENST00000561330 ZNF468Q5VIY5 522 aaPredicted RBP8.82□□□□□ -1
USP8-218ENST00000561330 CMTR1Q8N1G2 835 aaKnown RBP8.82□□□□□ -1
USP8-218ENST00000561330 GOLGA6L1Q8N7Z2 621 aa8.82□□□□□ -1
USP8-218ENST00000561330 ZSCAN1Q8NBB4 408 aa8.82□□□□□ -1
USP8-218ENST00000561330 PIK3R5Q8WYR1 880 aa8.82□□□□□ -1
USP8-218ENST00000561330 ACDQ96AP0 544 aa8.82□□□□□ -1
USP8-218ENST00000561330 C11orf16Q9NQ32 467 aa8.82□□□□□ -1
USP8-218ENST00000561330 AVENQ9NQS1 362 aaPredicted RBP8.82□□□□□ -1
USP8-218ENST00000561330 GDF2Q9UK05 429 aaPredicted RBP8.82□□□□□ -1
USP8-218ENST00000561330 USP20Q9Y2K6 914 aa8.82□□□□□ -1
USP8-218ENST00000561330 ICMTO60725 284 aa8.81□□□□□ -1
USP8-218ENST00000561330 NPR3P17342 541 aa8.81□□□□□ -1
USP8-218ENST00000561330 ADH6P28332 368 aa8.81□□□□□ -1
USP8-218ENST00000561330 GRNP28799 593 aaKnown RBP8.81□□□□□ -1
USP8-218ENST00000561330 EIF1AXP47813 144 aaKnown RBP8.81□□□□□ -1
USP8-218ENST00000561330 KCNA1Q09470 495 aa8.81□□□□□ -1
USP8-218ENST00000561330 CCINQ13939 588 aa8.81□□□□□ -1
USP8-218ENST00000561330 ALKBH2Q6NS38 261 aa8.81□□□□□ -1
USP8-218ENST00000561330 GNEQ9Y223 722 aaKnown RBP8.81□□□□□ -1
USP8-218ENST00000561330 H3BRB1 525 aa8.8□□□□□ -1
USP8-218ENST00000561330 PCBP4P57723 403 aaKnown RBP8.8□□□□□ -1
USP8-218ENST00000561330 AAMPQ13685 434 aa8.8□□□□□ -1
USP8-218ENST00000561330 LYPD4Q6UWN0 246 aa8.8□□□□□ -1
USP8-218ENST00000561330 GLYCTKQ8IVS8 523 aa8.8□□□□□ -1
USP8-218ENST00000561330 GPR152Q8TDT2 470 aa8.8□□□□□ -1
USP8-218ENST00000561330 WHAMMQ8TF30 809 aa8.8□□□□□ -1
USP8-218ENST00000561330 BHMTQ93088 406 aa8.8□□□□□ -1
USP8-218ENST00000561330 PNMA5Q96PV4 448 aa8.8□□□□□ -1
USP8-218ENST00000561330 GSX2Q9BZM3 304 aa8.8□□□□□ -1
USP8-218ENST00000561330 TUT1Q9H6E5 874 aaKnown RBP8.8□□□□□ -1
USP8-218ENST00000561330 EFCC1Q9HA90 598 aa8.8□□□□□ -1
USP8-218ENST00000561330 GGA1Q9UJY5 639 aa8.8□□□□□ -1
USP8-218ENST00000561330 NEURL1BA8MQ27 555 aa8.79□□□□□ -1
USP8-218ENST00000561330 PATL2C9JE40 543 aaKnown RBP8.79□□□□□ -1
USP8-218ENST00000561330 XYLBO75191 536 aa8.79□□□□□ -1
USP8-218ENST00000561330 CELA2BP08218 269 aaPredicted RBP8.79□□□□□ -1
USP8-218ENST00000561330 BCRP11274 1271 aa8.79□□□□□ -1
USP8-218ENST00000561330 MAP3K10Q02779 954 aa8.79□□□□□ -1
USP8-218ENST00000561330 ZNF385CQ66K41 422 aaPredicted RBP8.79□□□□□ -1
USP8-218ENST00000561330 RAB44Q7Z6P3 723 aaPredicted RBP8.79□□□□□ -1
USP8-218ENST00000561330 SYT9Q86SS6 491 aa8.79□□□□□ -1
USP8-218ENST00000561330 ATCAYQ86WG3 371 aa8.79□□□□□ -1
USP8-218ENST00000561330 SVOPQ8N4V2 548 aa8.79□□□□□ -1
USP8-218ENST00000561330 SIN3BO75182 1162 aa8.78□□□□□ -1
USP8-218ENST00000561330 LORP23490 312 aaPredicted RBP8.78□□□□□ -1
USP8-218ENST00000561330 SLCO4C1Q6ZQN7 724 aa8.78□□□□□ -1
USP8-218ENST00000561330 KLF15Q9UIH9 416 aa8.78□□□□□ -1
USP8-218ENST00000561330 KCNMB2Q9Y691 235 aa8.78□□□□□ -1
USP8-218ENST00000561330 OIP5O43482 229 aa8.77□□□□□ -1.01
USP8-218ENST00000561330 EGFRP00533 1210 aa8.77□□□□□ -1.01
USP8-218ENST00000561330 PCSK2P16519 638 aa8.77□□□□□ -1.01
USP8-218ENST00000561330 NFKB1P19838 968 aa8.77□□□□□ -1.01
USP8-218ENST00000561330 DNM1Q05193 864 aaKnown RBP8.77□□□□□ -1.01
USP8-218ENST00000561330 AEBP1Q8IUX7 1158 aa8.77□□□□□ -1.01
USP8-218ENST00000561330 EDEM1Q92611 657 aa8.77□□□□□ -1.01
USP8-218ENST00000561330 LRRC4BQ9NT99 713 aa8.77□□□□□ -1.01
USP8-218ENST00000561330 FNDC3AQ9Y2H6 1198 aaKnown RBP8.77□□□□□ -1.01
USP8-218ENST00000561330 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.77□□□□□ -1.01
USP8-218ENST00000561330 IVNS1ABPQ9Y6Y0 642 aa8.77□□□□□ -1.01
USP8-218ENST00000561330 SASH3O75995 380 aa8.76□□□□□ -1.01
USP8-218ENST00000561330 KRT25Q7Z3Z0 450 aa8.76□□□□□ -1.01
USP8-218ENST00000561330 HOMEZQ8IX15 550 aa8.76□□□□□ -1.01
USP8-218ENST00000561330 GALNT6Q8NCL4 622 aa8.76□□□□□ -1.01
USP8-218ENST00000561330 TTC16Q8NEE8 873 aa8.76□□□□□ -1.01
USP8-218ENST00000561330 ENAMQ9NRM1 1142 aa8.76□□□□□ -1.01
USP8-218ENST00000561330 SOWAHDA6NJG2 315 aa8.75□□□□□ -1.01
USP8-218ENST00000561330 UBAP1LF5GYI3 381 aa8.75□□□□□ -1.01
USP8-218ENST00000561330 RPLP1P05386 114 aaKnown RBP8.75□□□□□ -1.01
USP8-218ENST00000561330 TARSP26639 723 aaKnown RBP8.75□□□□□ -1.01
USP8-218ENST00000561330 MZF1P28698 734 aaPredicted RBP8.75□□□□□ -1.01
USP8-218ENST00000561330 FCHSD1Q86WN1 690 aa8.75□□□□□ -1.01
USP8-218ENST00000561330 KCTD17Q8N5Z5 321 aa8.75□□□□□ -1.01
USP8-218ENST00000561330 EDARADDQ8WWZ3 215 aa8.75□□□□□ -1.01
USP8-218ENST00000561330 NUDT16Q96DE0 195 aaKnown RBP8.75□□□□□ -1.01
USP8-218ENST00000561330 PDGFAP04085 211 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms