RNA–Protein interactions for RNA: ENST00000561321.1

SEMA4B-220, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-220ENST00000561321 RRAGCQ9HB90 399 aa15.98■□□□□ 0.15
SEMA4B-220ENST00000561321 ZC3H4Q9UPT8 1303 aaKnown RBP15.97■□□□□ 0.15
SEMA4B-220ENST00000561321 ALDH1B1P30837 517 aa15.97■□□□□ 0.15
SEMA4B-220ENST00000561321 C16orf71Q8IYS4 520 aaPredicted RBP15.97■□□□□ 0.15
SEMA4B-220ENST00000561321 C7orf43Q8WVR3 580 aa15.97■□□□□ 0.15
SEMA4B-220ENST00000561321 DICER1Q9UPY3 1922 aaKnown RBP15.96■□□□□ 0.15
SEMA4B-220ENST00000561321 TCIRG1Q13488 830 aa15.96■□□□□ 0.15
SEMA4B-220ENST00000561321 CRY2Q49AN0 593 aa15.96■□□□□ 0.15
SEMA4B-220ENST00000561321 C3orf67Q6ZVT6 689 aa15.96■□□□□ 0.15
SEMA4B-220ENST00000561321 C8orf58Q8NAV2 365 aa15.96■□□□□ 0.15
SEMA4B-220ENST00000561321 TSR2Q969E8 191 aaKnown RBP15.96■□□□□ 0.15
SEMA4B-220ENST00000561321 HYPKQ9NX55 129 aa15.96■□□□□ 0.15
SEMA4B-220ENST00000561321 SALL2Q9Y467 1007 aaPredicted RBP15.96■□□□□ 0.15
SEMA4B-220ENST00000561321 LTBP3Q9NS15 1303 aa15.95■□□□□ 0.14
SEMA4B-220ENST00000561321 RIC1Q4ADV7 1423 aa15.95■□□□□ 0.14
SEMA4B-220ENST00000561321 GLTPD2A6NH11 291 aa15.95■□□□□ 0.14
SEMA4B-220ENST00000561321 TOMM70O94826 608 aa15.95■□□□□ 0.14
SEMA4B-220ENST00000561321 ANKRD13DQ6ZTN6 518 aa15.95■□□□□ 0.14
SEMA4B-220ENST00000561321 NLRP10Q86W26 655 aa15.95■□□□□ 0.14
SEMA4B-220ENST00000561321 PLBD2Q8NHP8 589 aa15.95■□□□□ 0.14
SEMA4B-220ENST00000561321 RBM17Q96I25 401 aaKnown RBP15.95■□□□□ 0.14
SEMA4B-220ENST00000561321 CEP350Q5VT06 3117 aa15.94■□□□□ 0.14
SEMA4B-220ENST00000561321 TCERG1O14776 1098 aaKnown RBP15.94■□□□□ 0.14
SEMA4B-220ENST00000561321 WWC1Q8IX03 1113 aa15.94■□□□□ 0.14
SEMA4B-220ENST00000561321 NLRP3Q96P20 1036 aa15.94■□□□□ 0.14
SEMA4B-220ENST00000561321 ZNF277Q9NRM2 450 aaPredicted RBP15.94■□□□□ 0.14
SEMA4B-220ENST00000561321 TRMT112Q9UI30 125 aaKnown RBP15.94■□□□□ 0.14
SEMA4B-220ENST00000561321 ATP5J2-PTCD1G3V325 749 aa15.93■□□□□ 0.14
SEMA4B-220ENST00000561321 HCLS1P14317 486 aaPredicted RBP15.93■□□□□ 0.14
SEMA4B-220ENST00000561321 FKBP4Q02790 459 aaKnown RBP eCLIP15.93■□□□□ 0.14
SEMA4B-220ENST00000561321 CCDC27Q2M243 656 aa15.93■□□□□ 0.14
SEMA4B-220ENST00000561321 RTKN2Q8IZC4 609 aa15.93■□□□□ 0.14
SEMA4B-220ENST00000561321 FAM9BQ8IZU0 186 aa15.93■□□□□ 0.14
SEMA4B-220ENST00000561321 SYNE4Q8N205 404 aa15.93■□□□□ 0.14
SEMA4B-220ENST00000561321 TSPYL6Q8N831 410 aa15.93■□□□□ 0.14
SEMA4B-220ENST00000561321 PHAXQ9H814 394 aaKnown RBP15.93■□□□□ 0.14
SEMA4B-220ENST00000561321 HSPA6P17066 643 aa15.92■□□□□ 0.14
SEMA4B-220ENST00000561321 HOXA10P31260 410 aaPredicted RBP15.92■□□□□ 0.14
SEMA4B-220ENST00000561321 DPY19L2Q6NUT2 758 aa15.92■□□□□ 0.14
SEMA4B-220ENST00000561321 LAMB2P55268 1798 aa15.92■□□□□ 0.14
SEMA4B-220ENST00000561321 RNF123Q5XPI4 1314 aa15.92■□□□□ 0.14
SEMA4B-220ENST00000561321 SH3TC1Q8TE82 1336 aa15.92■□□□□ 0.14
SEMA4B-220ENST00000561321 PPEF1O14829 653 aaPredicted RBP15.91■□□□□ 0.14
SEMA4B-220ENST00000561321 GOLGA2Q08379 1002 aa15.91■□□□□ 0.14
SEMA4B-220ENST00000561321 SLC10A5Q5PT55 438 aa15.91■□□□□ 0.14
SEMA4B-220ENST00000561321 RIC3Q7Z5B4 369 aa15.91■□□□□ 0.14
SEMA4B-220ENST00000561321 SLC51AQ86UW1 340 aa15.91■□□□□ 0.14
SEMA4B-220ENST00000561321 CRAMP1Q96RY5 1269 aa15.91■□□□□ 0.14
SEMA4B-220ENST00000561321 CCDC30Q5VVM6 783 aa15.9■□□□□ 0.14
SEMA4B-220ENST00000561321 RBM46Q8TBY0 533 aaKnown RBP15.9■□□□□ 0.14
SEMA4B-220ENST00000561321 ISCA1Q9BUE6 129 aa15.9■□□□□ 0.14
SEMA4B-220ENST00000561321 ABCC4O15439 1325 aa15.9■□□□□ 0.14
SEMA4B-220ENST00000561321 VEGFAP15692 232 aaPredicted RBP15.89■□□□□ 0.13
SEMA4B-220ENST00000561321 RTL5Q5HYW3 569 aaPredicted RBP15.89■□□□□ 0.13
SEMA4B-220ENST00000561321 FAM89AQ96GI7 184 aa15.89■□□□□ 0.13
SEMA4B-220ENST00000561321 DDNO94850 711 aaPredicted RBP15.88■□□□□ 0.13
SEMA4B-220ENST00000561321 IARSP41252 1262 aaKnown RBP15.88■□□□□ 0.13
SEMA4B-220ENST00000561321 TWISTNBQ3B726 338 aaPredicted RBP15.88■□□□□ 0.13
SEMA4B-220ENST00000561321 MYD88Q99836 296 aa15.88■□□□□ 0.13
SEMA4B-220ENST00000561321 CHMP4AQ9BY43 222 aa15.88■□□□□ 0.13
SEMA4B-220ENST00000561321 IL16Q14005 1332 aa15.88■□□□□ 0.13
SEMA4B-220ENST00000561321 DDX60Q8IY21 1712 aaKnown RBP15.88■□□□□ 0.13
SEMA4B-220ENST00000561321 WDR90Q96KV7 1748 aa15.88■□□□□ 0.13
SEMA4B-220ENST00000561321 CC2D2BQ6DHV5 1058 aa15.87■□□□□ 0.13
SEMA4B-220ENST00000561321 DDX46Q7L014 1031 aaKnown RBP15.87■□□□□ 0.13
SEMA4B-220ENST00000561321 PSMD1Q99460 953 aa15.87■□□□□ 0.13
SEMA4B-220ENST00000561321 STK31Q9BXU1 1019 aa15.87■□□□□ 0.13
SEMA4B-220ENST00000561321 TMX4Q9H1E5 349 aaPredicted RBP15.87■□□□□ 0.13
SEMA4B-220ENST00000561321 TAF1P21675 1872 aa15.86■□□□□ 0.13
SEMA4B-220ENST00000561321 SNED1Q8TER0 1413 aa15.86■□□□□ 0.13
SEMA4B-220ENST00000561321 POTECB2RU33 542 aa15.86■□□□□ 0.13
SEMA4B-220ENST00000561321 DDX58O95786 925 aaKnown RBP15.86■□□□□ 0.13
SEMA4B-220ENST00000561321 NCBP3Q53F19 620 aaKnown RBP15.86■□□□□ 0.13
SEMA4B-220ENST00000561321 ZNF541Q9H0D2 1346 aa15.86■□□□□ 0.13
SEMA4B-220ENST00000561321 FANCIQ9NVI1 1328 aa15.86■□□□□ 0.13
SEMA4B-220ENST00000561321 FSTL1Q12841 308 aa15.85■□□□□ 0.13
SEMA4B-220ENST00000561321 WDR63Q8IWG1 891 aa15.85■□□□□ 0.13
SEMA4B-220ENST00000561321 SMC1BQ8NDV3 1235 aa15.85■□□□□ 0.13
SEMA4B-220ENST00000561321 ATP6V0A2Q9Y487 856 aa15.85■□□□□ 0.13
SEMA4B-220ENST00000561321 IRS4O14654 1257 aaPredicted RBP15.84■□□□□ 0.13
SEMA4B-220ENST00000561321 APLP1P51693 650 aa15.84■□□□□ 0.13
SEMA4B-220ENST00000561321 TRIM28Q13263 835 aaKnown RBP15.84■□□□□ 0.13
SEMA4B-220ENST00000561321 GRAPQ13588 217 aa15.84■□□□□ 0.13
SEMA4B-220ENST00000561321 GRIPAP1Q4V328 841 aa15.84■□□□□ 0.13
SEMA4B-220ENST00000561321 LARGE2Q8N3Y3 721 aa15.84■□□□□ 0.13
SEMA4B-220ENST00000561321 GRAPLQ8TC17 118 aaPredicted RBP15.84■□□□□ 0.13
SEMA4B-220ENST00000561321 JDP2Q8WYK2 163 aa15.84■□□□□ 0.13
SEMA4B-220ENST00000561321 MAP3K2Q9Y2U5 619 aa15.84■□□□□ 0.13
SEMA4B-220ENST00000561321 BBOX1O75936 387 aa15.83■□□□□ 0.12
SEMA4B-220ENST00000561321 ZBTB38Q8NAP3 1195 aaPredicted RBP15.83■□□□□ 0.12
SEMA4B-220ENST00000561321 JARID2Q92833 1246 aaPredicted RBP15.83■□□□□ 0.12
SEMA4B-220ENST00000561321 METTL22Q9BUU2 404 aaPredicted RBP15.83■□□□□ 0.12
SEMA4B-220ENST00000561321 COL4A5P29400 1685 aa15.83■□□□□ 0.12
SEMA4B-220ENST00000561321 PI4KAP2A4QPH2 592 aa15.82■□□□□ 0.12
SEMA4B-220ENST00000561321 FZD9O00144 591 aa15.82■□□□□ 0.12
SEMA4B-220ENST00000561321 PPIP5K2O43314 1243 aa15.82■□□□□ 0.12
SEMA4B-220ENST00000561321 SLC4A2P04920 1241 aa15.82■□□□□ 0.12
SEMA4B-220ENST00000561321 EXOSC9Q06265 439 aaKnown RBP15.82■□□□□ 0.12
SEMA4B-220ENST00000561321 DPP8Q6V1X1 898 aaPredicted RBP15.82■□□□□ 0.12
SEMA4B-220ENST00000561321 G2E3Q7L622 706 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms