RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 CREB3L3Q68CJ9 461 aa19.46■□□□□ 0.71
TPM1-228ENST00000560975 DDX11Q96FC9 970 aa19.46■□□□□ 0.71
TPM1-228ENST00000560975 PDCP20941 246 aa19.45■□□□□ 0.7
TPM1-228ENST00000560975 TM6SF1Q9BZW5 370 aa19.45■□□□□ 0.7
TPM1-228ENST00000560975 ARHGEF10O15013 1369 aa19.45■□□□□ 0.7
TPM1-228ENST00000560975 GLRX3O76003 335 aaKnown RBP19.45■□□□□ 0.7
TPM1-228ENST00000560975 POLA2Q14181 598 aa19.45■□□□□ 0.7
TPM1-228ENST00000560975 RBM43Q6ZSC3 357 aaKnown RBP19.45■□□□□ 0.7
TPM1-228ENST00000560975 NYAP1Q6ZVC0 841 aa19.45■□□□□ 0.7
TPM1-228ENST00000560975 GTF3C6Q969F1 213 aa19.45■□□□□ 0.7
TPM1-228ENST00000560975 ERO1AQ96HE7 468 aa19.45■□□□□ 0.7
TPM1-228ENST00000560975 ZNF446Q9NWS9 450 aa19.44■□□□□ 0.7
TPM1-228ENST00000560975 NECTIN1Q15223 517 aa19.44■□□□□ 0.7
TPM1-228ENST00000560975 SLU7O95391 586 aaKnown RBP19.43■□□□□ 0.7
TPM1-228ENST00000560975 FAM227BQ96M60 508 aa19.43■□□□□ 0.7
TPM1-228ENST00000560975 TAF6LQ9Y6J9 622 aa19.43■□□□□ 0.7
TPM1-228ENST00000560975 BECN2A8MW95 431 aa19.43■□□□□ 0.7
TPM1-228ENST00000560975 IQCB1Q15051 598 aa19.43■□□□□ 0.7
TPM1-228ENST00000560975 DLC1Q96QB1 1528 aa19.42■□□□□ 0.7
TPM1-228ENST00000560975 ERBB3P21860 1342 aa19.42■□□□□ 0.7
TPM1-228ENST00000560975 RIMS1Q86UR5 1692 aaKnown RBP19.42■□□□□ 0.7
TPM1-228ENST00000560975 NPM1P06748 294 aaKnown RBP eCLIP19.42■□□□□ 0.7
TPM1-228ENST00000560975 EIF2S2P20042 333 aaKnown RBP19.42■□□□□ 0.7
TPM1-228ENST00000560975 CDC25BP30305 580 aa19.42■□□□□ 0.7
TPM1-228ENST00000560975 FOSBP53539 338 aa19.42■□□□□ 0.7
TPM1-228ENST00000560975 ERCC6LQ2NKX8 1250 aa19.42■□□□□ 0.7
TPM1-228ENST00000560975 JAK2O60674 1132 aa19.42■□□□□ 0.7
TPM1-228ENST00000560975 CCZ1BP86790 482 aa19.42■□□□□ 0.7
TPM1-228ENST00000560975 CCZ1P86791 482 aaPredicted RBP19.42■□□□□ 0.7
TPM1-228ENST00000560975 CCAR2Q8N163 923 aaKnown RBP19.42■□□□□ 0.7
TPM1-228ENST00000560975 TTC21BQ7Z4L5 1316 aa19.41■□□□□ 0.7
TPM1-228ENST00000560975 PRR36Q9H6K5 1346 aa19.41■□□□□ 0.7
TPM1-228ENST00000560975 BLOC1S2Q6QNY1 142 aa19.41■□□□□ 0.7
TPM1-228ENST00000560975 LRRN4CLQ8ND94 238 aa19.41■□□□□ 0.7
TPM1-228ENST00000560975 NOL10Q9BSC4 688 aaKnown RBP19.41■□□□□ 0.7
TPM1-228ENST00000560975 SLC27A2O14975 620 aa19.41■□□□□ 0.7
TPM1-228ENST00000560975 HDGFL1Q5TGJ6 251 aa19.41■□□□□ 0.7
TPM1-228ENST00000560975 ERCC4Q92889 916 aaPredicted RBP19.41■□□□□ 0.7
TPM1-228ENST00000560975 FAM53CQ9NYF3 392 aa19.41■□□□□ 0.7
TPM1-228ENST00000560975 XRN1Q8IZH2 1706 aaKnown RBP19.4■□□□□ 0.7
TPM1-228ENST00000560975 CLASRPQ8N2M8 674 aaKnown RBP19.4■□□□□ 0.7
TPM1-228ENST00000560975 PLCD3Q8N3E9 789 aa19.4■□□□□ 0.7
TPM1-228ENST00000560975 MRFAP1L1Q96HT8 127 aa19.4■□□□□ 0.7
TPM1-228ENST00000560975 CALCOCO1Q9P1Z2 691 aa19.4■□□□□ 0.7
TPM1-228ENST00000560975 NEMFO60524 1076 aa19.39■□□□□ 0.7
TPM1-228ENST00000560975 NMIQ13287 307 aaPredicted RBP19.39■□□□□ 0.7
TPM1-228ENST00000560975 NRKQ7Z2Y5 1582 aa19.39■□□□□ 0.69
TPM1-228ENST00000560975 TAF7Q15545 349 aaPredicted RBP19.39■□□□□ 0.69
TPM1-228ENST00000560975 ECHDC1Q9NTX5 307 aa19.39■□□□□ 0.69
TPM1-228ENST00000560975 PA2G4Q9UQ80 394 aaKnown RBP19.39■□□□□ 0.69
TPM1-228ENST00000560975 MAP3K5Q99683 1374 aa19.39■□□□□ 0.69
TPM1-228ENST00000560975 IFIT2P09913 472 aaKnown RBP19.38■□□□□ 0.69
TPM1-228ENST00000560975 KCNB2Q92953 911 aa19.38■□□□□ 0.69
TPM1-228ENST00000560975 TTC41PQ6P2S7 1318 aa19.38■□□□□ 0.69
TPM1-228ENST00000560975 H3BQV1 296 aa19.38■□□□□ 0.69
TPM1-228ENST00000560975 PSMA5P28066 241 aa19.38■□□□□ 0.69
TPM1-228ENST00000560975 GORABQ5T7V8 394 aa19.38■□□□□ 0.69
TPM1-228ENST00000560975 IFFO2Q5TF58 517 aa19.38■□□□□ 0.69
TPM1-228ENST00000560975 SARM1Q6SZW1 724 aa19.38■□□□□ 0.69
TPM1-228ENST00000560975 BRF1Q92994 677 aa19.38■□□□□ 0.69
TPM1-228ENST00000560975 FTOQ9C0B1 505 aaKnown RBP eCLIP19.38■□□□□ 0.69
TPM1-228ENST00000560975 SNW1Q13573 536 aaKnown RBP19.37■□□□□ 0.69
TPM1-228ENST00000560975 TOB2Q14106 344 aaPredicted RBP19.37■□□□□ 0.69
TPM1-228ENST00000560975 STX1AQ16623 288 aa19.37■□□□□ 0.69
TPM1-228ENST00000560975 SYT10Q6XYQ8 523 aa19.37■□□□□ 0.69
TPM1-228ENST00000560975 EYA1Q99502 592 aa19.37■□□□□ 0.69
TPM1-228ENST00000560975 ANXA1P04083 346 aa19.37■□□□□ 0.69
TPM1-228ENST00000560975 CAPN2P17655 700 aa19.37■□□□□ 0.69
TPM1-228ENST00000560975 BMS1Q14692 1282 aaKnown RBP19.37■□□□□ 0.69
TPM1-228ENST00000560975 MAP4K1Q92918 833 aa19.36■□□□□ 0.69
TPM1-228ENST00000560975 ACEP12821 1306 aa19.36■□□□□ 0.69
TPM1-228ENST00000560975 METP08581 1390 aa19.36■□□□□ 0.69
TPM1-228ENST00000560975 RPS6KB1P23443 525 aa19.36■□□□□ 0.69
TPM1-228ENST00000560975 HNRNPH2P55795 449 aaKnown RBP19.36■□□□□ 0.69
TPM1-228ENST00000560975 SLFNL1Q499Z3 407 aa19.36■□□□□ 0.69
TPM1-228ENST00000560975 AACSQ86V21 672 aa19.36■□□□□ 0.69
TPM1-228ENST00000560975 CCAR1Q8IX12 1150 aaKnown RBP19.36■□□□□ 0.69
TPM1-228ENST00000560975 AOPEPQ8N6M6 819 aa19.36■□□□□ 0.69
TPM1-228ENST00000560975 CLCN6P51797 869 aa19.35■□□□□ 0.69
TPM1-228ENST00000560975 HSP90AB4PQ58FF6 505 aa19.35■□□□□ 0.69
TPM1-228ENST00000560975 PI4KAP2A4QPH2 592 aa19.35■□□□□ 0.69
TPM1-228ENST00000560975 GNAT3A8MTJ3 354 aa19.35■□□□□ 0.69
TPM1-228ENST00000560975 RESTQ13127 1097 aa19.35■□□□□ 0.69
TPM1-228ENST00000560975 DHX40Q8IX18 779 aaKnown RBP19.35■□□□□ 0.69
TPM1-228ENST00000560975 PI4KAP1Q8N8J0 262 aa19.35■□□□□ 0.69
TPM1-228ENST00000560975 EVI5LQ96CN4 794 aa19.35■□□□□ 0.69
TPM1-228ENST00000560975 A0A0D9SFI3 127 aa19.34■□□□□ 0.69
TPM1-228ENST00000560975 POLR3GO15318 223 aaPredicted RBP19.34■□□□□ 0.69
TPM1-228ENST00000560975 CAVIN2O95810 425 aa19.34■□□□□ 0.69
TPM1-228ENST00000560975 ANKRD1Q15327 319 aa19.34■□□□□ 0.69
TPM1-228ENST00000560975 IL17REQ8NFR9 667 aa19.34■□□□□ 0.69
TPM1-228ENST00000560975 GPATCH3Q96I76 525 aa19.34■□□□□ 0.69
TPM1-228ENST00000560975 FHOD1Q9Y613 1164 aa19.34■□□□□ 0.69
TPM1-228ENST00000560975 PEAK1Q9H792 1746 aa19.34■□□□□ 0.69
TPM1-228ENST00000560975 GOLPH3LQ9H4A5 285 aa19.34■□□□□ 0.69
TPM1-228ENST00000560975 DIP2CQ9Y2E4 1556 aa19.34■□□□□ 0.69
TPM1-228ENST00000560975 C3P01024 1663 aa19.34■□□□□ 0.69
TPM1-228ENST00000560975 MON2Q7Z3U7 1717 aa19.34■□□□□ 0.69
TPM1-228ENST00000560975 USP42Q9H9J4 1324 aaKnown RBP19.34■□□□□ 0.69
TPM1-228ENST00000560975 PPFIA3O75145 1194 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms