RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 TOMM70O94826 608 aa14.65□□□□□ -0.06
GABPB1-210ENST00000560825 ZNF853P0CG23 659 aa14.65□□□□□ -0.06
GABPB1-210ENST00000560825 NPR1P16066 1061 aa14.65□□□□□ -0.06
GABPB1-210ENST00000560825 CRY2Q49AN0 593 aa14.65□□□□□ -0.06
GABPB1-210ENST00000560825 CNKSR1Q969H4 720 aa14.65□□□□□ -0.06
GABPB1-210ENST00000560825 DSG3P32926 999 aa14.64□□□□□ -0.07
GABPB1-210ENST00000560825 LMOD3Q0VAK6 560 aa14.64□□□□□ -0.07
GABPB1-210ENST00000560825 ZNF277Q9NRM2 450 aaPredicted RBP14.64□□□□□ -0.07
GABPB1-210ENST00000560825 BABAM1Q9NWV8 329 aa14.64□□□□□ -0.07
GABPB1-210ENST00000560825 ERBB4Q15303 1308 aa14.64□□□□□ -0.07
GABPB1-210ENST00000560825 POTEIP0CG38 1075 aa14.63□□□□□ -0.07
GABPB1-210ENST00000560825 POTEJP0CG39 1038 aa14.63□□□□□ -0.07
GABPB1-210ENST00000560825 TAOK3Q9H2K8 898 aa14.63□□□□□ -0.07
GABPB1-210ENST00000560825 LTBP1Q14766 1721 aa14.63□□□□□ -0.07
GABPB1-210ENST00000560825 KDM2BQ8NHM5 1336 aa14.63□□□□□ -0.07
GABPB1-210ENST00000560825 LTBP3Q9NS15 1303 aa14.63□□□□□ -0.07
GABPB1-210ENST00000560825 ELL2O00472 640 aaPredicted RBP14.62□□□□□ -0.07
GABPB1-210ENST00000560825 TCERG1O14776 1098 aaKnown RBP14.62□□□□□ -0.07
GABPB1-210ENST00000560825 DDNO94850 711 aaPredicted RBP14.62□□□□□ -0.07
GABPB1-210ENST00000560825 CFAP44Q96MT7 982 aa14.62□□□□□ -0.07
GABPB1-210ENST00000560825 PDZRN3Q9UPQ7 1066 aa14.62□□□□□ -0.07
GABPB1-210ENST00000560825 RIC1Q4ADV7 1423 aa14.62□□□□□ -0.07
GABPB1-210ENST00000560825 GTF2E1P29083 439 aaPredicted RBP14.61□□□□□ -0.07
GABPB1-210ENST00000560825 NLRP10Q86W26 655 aa14.61□□□□□ -0.07
GABPB1-210ENST00000560825 C8orf58Q8NAV2 365 aa14.61□□□□□ -0.07
GABPB1-210ENST00000560825 DDX21Q9NR30 783 aaKnown RBP eCLIP14.61□□□□□ -0.07
GABPB1-210ENST00000560825 ZNF541Q9H0D2 1346 aa14.61□□□□□ -0.07
GABPB1-210ENST00000560825 IBTKQ9P2D0 1353 aaPredicted RBP14.61□□□□□ -0.07
GABPB1-210ENST00000560825 HCLS1P14317 486 aaPredicted RBP14.6□□□□□ -0.07
GABPB1-210ENST00000560825 DUSP27Q5VZP5 1158 aa14.6□□□□□ -0.07
GABPB1-210ENST00000560825 ADAMTSL1Q8N6G6 1762 aa14.6□□□□□ -0.07
GABPB1-210ENST00000560825 DNAJC5GQ8N7S2 189 aa14.6□□□□□ -0.07
GABPB1-210ENST00000560825 TSPYL6Q8N831 410 aa14.6□□□□□ -0.07
GABPB1-210ENST00000560825 RBM46Q8TBY0 533 aaKnown RBP14.6□□□□□ -0.07
GABPB1-210ENST00000560825 PHAXQ9H814 394 aaKnown RBP14.6□□□□□ -0.07
GABPB1-210ENST00000560825 SCN4AP35499 1836 aa14.6□□□□□ -0.07
GABPB1-210ENST00000560825 LRRC37AA6NMS7 1700 aa14.6□□□□□ -0.07
GABPB1-210ENST00000560825 DUOX1Q9NRD9 1551 aa14.59□□□□□ -0.07
GABPB1-210ENST00000560825 ZC3H4Q9UPT8 1303 aaKnown RBP14.59□□□□□ -0.07
GABPB1-210ENST00000560825 CCDC93Q567U6 631 aa14.59□□□□□ -0.07
GABPB1-210ENST00000560825 HDGFL1Q5TGJ6 251 aa14.59□□□□□ -0.07
GABPB1-210ENST00000560825 NYXQ9GZU5 481 aa14.59□□□□□ -0.07
GABPB1-210ENST00000560825 ATP5J2-PTCD1G3V325 749 aa14.58□□□□□ -0.07
GABPB1-210ENST00000560825 HOXA10P31260 410 aaPredicted RBP14.58□□□□□ -0.07
GABPB1-210ENST00000560825 FKBP4Q02790 459 aaKnown RBP eCLIP14.58□□□□□ -0.07
GABPB1-210ENST00000560825 TSR2Q969E8 191 aaKnown RBP14.58□□□□□ -0.07
GABPB1-210ENST00000560825 SPEF2Q9C093 1822 aa14.58□□□□□ -0.08
GABPB1-210ENST00000560825 ZNF316A6NFI3 1004 aaPredicted RBP14.58□□□□□ -0.08
GABPB1-210ENST00000560825 TCIRG1Q13488 830 aa14.58□□□□□ -0.08
GABPB1-210ENST00000560825 ABCC4O15439 1325 aa14.57□□□□□ -0.08
GABPB1-210ENST00000560825 VEGFAP15692 232 aaPredicted RBP14.57□□□□□ -0.08
GABPB1-210ENST00000560825 SLC10A5Q5PT55 438 aa14.57□□□□□ -0.08
GABPB1-210ENST00000560825 UTP14AQ9BVJ6 771 aaKnown RBP14.57□□□□□ -0.08
GABPB1-210ENST00000560825 ALDH1B1P30837 517 aa14.56□□□□□ -0.08
GABPB1-210ENST00000560825 PARP10Q53GL7 1025 aa14.56□□□□□ -0.08
GABPB1-210ENST00000560825 RTL5Q5HYW3 569 aaPredicted RBP14.56□□□□□ -0.08
GABPB1-210ENST00000560825 PPP1R42Q7Z4L9 355 aa14.56□□□□□ -0.08
GABPB1-210ENST00000560825 C16orf71Q8IYS4 520 aaPredicted RBP14.56□□□□□ -0.08
GABPB1-210ENST00000560825 JARID2Q92833 1246 aaPredicted RBP14.56□□□□□ -0.08
GABPB1-210ENST00000560825 RPGRQ92834 1020 aaKnown RBP14.56□□□□□ -0.08
GABPB1-210ENST00000560825 IFT57Q9NWB7 429 aa14.56□□□□□ -0.08
GABPB1-210ENST00000560825 PPEF1O14829 653 aaPredicted RBP14.55□□□□□ -0.08
GABPB1-210ENST00000560825 CAPN15O75808 1086 aa14.55□□□□□ -0.08
GABPB1-210ENST00000560825 IARSP41252 1262 aaKnown RBP14.55□□□□□ -0.08
GABPB1-210ENST00000560825 ANKRD13DQ6ZTN6 518 aa14.55□□□□□ -0.08
GABPB1-210ENST00000560825 FAM89AQ96GI7 184 aa14.55□□□□□ -0.08
GABPB1-210ENST00000560825 ISCA1Q9BUE6 129 aa14.55□□□□□ -0.08
GABPB1-210ENST00000560825 APLP1P51693 650 aa14.54□□□□□ -0.08
GABPB1-210ENST00000560825 SOGA3Q5TF21 947 aa14.54□□□□□ -0.08
GABPB1-210ENST00000560825 PLBD2Q8NHP8 589 aa14.54□□□□□ -0.08
GABPB1-210ENST00000560825 CRAMP1Q96RY5 1269 aa14.54□□□□□ -0.08
GABPB1-210ENST00000560825 DBF4Q9UBU7 674 aaPredicted RBP14.54□□□□□ -0.08
GABPB1-210ENST00000560825 TRMT112Q9UI30 125 aaKnown RBP14.54□□□□□ -0.08
GABPB1-210ENST00000560825 SALL2Q9Y467 1007 aaPredicted RBP14.54□□□□□ -0.08
GABPB1-210ENST00000560825 FZD9O00144 591 aa14.53□□□□□ -0.08
GABPB1-210ENST00000560825 HOXB7P09629 217 aa14.53□□□□□ -0.08
GABPB1-210ENST00000560825 FSTL1Q12841 308 aa14.53□□□□□ -0.08
GABPB1-210ENST00000560825 WWC1Q8IX03 1113 aa14.53□□□□□ -0.08
GABPB1-210ENST00000560825 RBM17Q96I25 401 aaKnown RBP14.53□□□□□ -0.08
GABPB1-210ENST00000560825 RNF123Q5XPI4 1314 aa14.52□□□□□ -0.08
GABPB1-210ENST00000560825 ZEB1P37275 1124 aaPredicted RBP14.52□□□□□ -0.08
GABPB1-210ENST00000560825 GNAI1P63096 354 aa14.52□□□□□ -0.08
GABPB1-210ENST00000560825 DPY19L2Q6NUT2 758 aa14.52□□□□□ -0.08
GABPB1-210ENST00000560825 RTKN2Q8IZC4 609 aa14.52□□□□□ -0.08
GABPB1-210ENST00000560825 SMC1BQ8NDV3 1235 aa14.52□□□□□ -0.08
GABPB1-210ENST00000560825 NLRP3Q96P20 1036 aa14.52□□□□□ -0.08
GABPB1-210ENST00000560825 PSMD1Q99460 953 aa14.52□□□□□ -0.08
GABPB1-210ENST00000560825 MRS2Q9HD23 443 aa14.52□□□□□ -0.08
GABPB1-210ENST00000560825 SPINK5Q9NQ38 1064 aaPredicted RBP14.52□□□□□ -0.08
GABPB1-210ENST00000560825 SH3TC1Q8TE82 1336 aa14.52□□□□□ -0.09
GABPB1-210ENST00000560825 MYH3P11055 1940 aa14.51□□□□□ -0.09
GABPB1-210ENST00000560825 G2E3Q7L622 706 aa14.51□□□□□ -0.09
GABPB1-210ENST00000560825 CELF1Q92879 486 aaKnown RBP14.5□□□□□ -0.09
GABPB1-210ENST00000560825 L3MBTL3Q96JM7 780 aaPredicted RBP14.5□□□□□ -0.09
GABPB1-210ENST00000560825 HYPKQ9NX55 129 aa14.5□□□□□ -0.09
GABPB1-210ENST00000560825 ATP6V0A2Q9Y487 856 aa14.5□□□□□ -0.09
GABPB1-210ENST00000560825 SCN9AQ15858 1988 aa14.5□□□□□ -0.09
GABPB1-210ENST00000560825 AOC3Q16853 763 aa14.49□□□□□ -0.09
GABPB1-210ENST00000560825 HSP90AB3PQ58FF7 597 aa14.49□□□□□ -0.09
GABPB1-210ENST00000560825 MYD88Q99836 296 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms