RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 SYNE4Q8N205 404 aa15.55■□□□□ 0.08
USP8-212ENST00000560730 STK31Q9BXU1 1019 aa15.55■□□□□ 0.08
USP8-212ENST00000560730 CHMP4AQ9BY43 222 aa15.55■□□□□ 0.08
USP8-212ENST00000560730 IBTKQ9P2D0 1353 aaPredicted RBP15.55■□□□□ 0.08
USP8-212ENST00000560730 KLRG2A4D1S0 409 aaPredicted RBP15.54■□□□□ 0.08
USP8-212ENST00000560730 PPP1R42Q7Z4L9 355 aa15.54■□□□□ 0.08
USP8-212ENST00000560730 RIC3Q7Z5B4 369 aa15.54■□□□□ 0.08
USP8-212ENST00000560730 TTLL6Q8N841 843 aa15.54■□□□□ 0.08
USP8-212ENST00000560730 ISCA1Q9BUE6 129 aa15.54■□□□□ 0.08
USP8-212ENST00000560730 UTP14AQ9BVJ6 771 aaKnown RBP15.54■□□□□ 0.08
USP8-212ENST00000560730 E9PSI1 815 aa15.53■□□□□ 0.08
USP8-212ENST00000560730 ARHGAP27Q6ZUM4 889 aa15.53■□□□□ 0.08
USP8-212ENST00000560730 C3orf67Q6ZVT6 689 aa15.53■□□□□ 0.08
USP8-212ENST00000560730 PDZRN3Q9UPQ7 1066 aa15.53■□□□□ 0.08
USP8-212ENST00000560730 STYK1Q6J9G0 422 aa15.52■□□□□ 0.08
USP8-212ENST00000560730 MASTLQ96GX5 879 aa15.52■□□□□ 0.08
USP8-212ENST00000560730 PI4KAP2A4QPH2 592 aa15.51■□□□□ 0.07
USP8-212ENST00000560730 ADCY9O60503 1353 aa15.51■□□□□ 0.07
USP8-212ENST00000560730 LAMB2P55268 1798 aa15.51■□□□□ 0.07
USP8-212ENST00000560730 TRMT2AQ8IZ69 625 aaKnown RBP15.51■□□□□ 0.07
USP8-212ENST00000560730 PI4KAP1Q8N8J0 262 aa15.51■□□□□ 0.07
USP8-212ENST00000560730 MYD88Q99836 296 aa15.51■□□□□ 0.07
USP8-212ENST00000560730 ZNF219Q9P2Y4 722 aaPredicted RBP15.51■□□□□ 0.07
USP8-212ENST00000560730 TRMT112Q9UI30 125 aaKnown RBP15.51■□□□□ 0.07
USP8-212ENST00000560730 MAP3K2Q9Y2U5 619 aa15.51■□□□□ 0.07
USP8-212ENST00000560730 SBF1O95248 1867 aa15.51■□□□□ 0.07
USP8-212ENST00000560730 DDX58O95786 925 aaKnown RBP15.51■□□□□ 0.07
USP8-212ENST00000560730 HCLS1P14317 486 aaPredicted RBP15.51■□□□□ 0.07
USP8-212ENST00000560730 TRIM28Q13263 835 aaKnown RBP15.51■□□□□ 0.07
USP8-212ENST00000560730 SLC10A5Q5PT55 438 aa15.51■□□□□ 0.07
USP8-212ENST00000560730 KSR2Q6VAB6 950 aa15.51■□□□□ 0.07
USP8-212ENST00000560730 METTL22Q9BUU2 404 aaPredicted RBP15.51■□□□□ 0.07
USP8-212ENST00000560730 CCDC88AQ3V6T2 1871 aa15.5■□□□□ 0.07
USP8-212ENST00000560730 RIC1Q4ADV7 1423 aa15.5■□□□□ 0.07
USP8-212ENST00000560730 NPR1P16066 1061 aa15.5■□□□□ 0.07
USP8-212ENST00000560730 FLIIQ13045 1269 aa15.5■□□□□ 0.07
USP8-212ENST00000560730 CRY2Q49AN0 593 aa15.5■□□□□ 0.07
USP8-212ENST00000560730 PRPF40BQ6NWY9 871 aaKnown RBP15.5■□□□□ 0.07
USP8-212ENST00000560730 CNKSR1Q969H4 720 aa15.5■□□□□ 0.07
USP8-212ENST00000560730 FAM89AQ96GI7 184 aa15.5■□□□□ 0.07
USP8-212ENST00000560730 DDX60Q8IY21 1712 aaKnown RBP15.49■□□□□ 0.07
USP8-212ENST00000560730 TAF1P21675 1872 aa15.49■□□□□ 0.07
USP8-212ENST00000560730 C21orf2O43822 256 aa15.49■□□□□ 0.07
USP8-212ENST00000560730 RTL5Q5HYW3 569 aaPredicted RBP15.49■□□□□ 0.07
USP8-212ENST00000560730 RNF123Q5XPI4 1314 aa15.48■□□□□ 0.07
USP8-212ENST00000560730 SH3TC1Q8TE82 1336 aa15.48■□□□□ 0.07
USP8-212ENST00000560730 IGKV5-2P06315 115 aa15.48■□□□□ 0.07
USP8-212ENST00000560730 HNRNPUQ00839 825 aaKnown RBP eCLIP15.48■□□□□ 0.07
USP8-212ENST00000560730 JARID2Q92833 1246 aaPredicted RBP15.48■□□□□ 0.07
USP8-212ENST00000560730 FER1L6Q2WGJ9 1857 aa15.47■□□□□ 0.07
USP8-212ENST00000560730 RASSF7Q02833 373 aa15.47■□□□□ 0.07
USP8-212ENST00000560730 FKBP5Q13451 457 aaPredicted RBP15.47■□□□□ 0.07
USP8-212ENST00000560730 OLFM4Q6UX06 510 aa15.47■□□□□ 0.07
USP8-212ENST00000560730 C7orf43Q8WVR3 580 aa15.47■□□□□ 0.07
USP8-212ENST00000560730 NLRP3Q96P20 1036 aa15.47■□□□□ 0.07
USP8-212ENST00000560730 HOXA10P31260 410 aaPredicted RBP15.46■□□□□ 0.07
USP8-212ENST00000560730 PRELPP51888 382 aa15.46■□□□□ 0.07
USP8-212ENST00000560730 CWF19L2Q2TBE0 894 aaKnown RBP15.46■□□□□ 0.07
USP8-212ENST00000560730 SLC51AQ86UW1 340 aa15.46■□□□□ 0.07
USP8-212ENST00000560730 CCDC191Q8NCU4 936 aa15.46■□□□□ 0.07
USP8-212ENST00000560730 F6X3S4 739 aa15.45■□□□□ 0.06
USP8-212ENST00000560730 NFKBIEO00221 500 aa15.45■□□□□ 0.06
USP8-212ENST00000560730 ZNF784Q8NCA9 323 aaPredicted RBP15.45■□□□□ 0.06
USP8-212ENST00000560730 RPGRQ92834 1020 aaKnown RBP15.45■□□□□ 0.06
USP8-212ENST00000560730 CWC25Q9NXE8 425 aaPredicted RBP15.45■□□□□ 0.06
USP8-212ENST00000560730 ALDH1B1P30837 517 aa15.44■□□□□ 0.06
USP8-212ENST00000560730 C9orf131Q5VYM1 1079 aa15.44■□□□□ 0.06
USP8-212ENST00000560730 MRPL50Q8N5N7 158 aaKnown RBP15.44■□□□□ 0.06
USP8-212ENST00000560730 ZBTB38Q8NAP3 1195 aaPredicted RBP15.44■□□□□ 0.06
USP8-212ENST00000560730 DNAAF4Q8WXU2 420 aa15.44■□□□□ 0.06
USP8-212ENST00000560730 SSH1Q8WYL5 1049 aa15.44■□□□□ 0.06
USP8-212ENST00000560730 CRAMP1Q96RY5 1269 aa15.44■□□□□ 0.06
USP8-212ENST00000560730 NEURL1BA8MQ27 555 aa15.43■□□□□ 0.06
USP8-212ENST00000560730 IRS4O14654 1257 aaPredicted RBP15.43■□□□□ 0.06
USP8-212ENST00000560730 PCCAP05165 728 aaPredicted RBP15.43■□□□□ 0.06
USP8-212ENST00000560730 NEXNQ0ZGT2 675 aa15.43■□□□□ 0.06
USP8-212ENST00000560730 RBM17Q96I25 401 aaKnown RBP15.43■□□□□ 0.06
USP8-212ENST00000560730 BCL2L13Q9BXK5 485 aa15.43■□□□□ 0.06
USP8-212ENST00000560730 ABCC4O15439 1325 aa15.42■□□□□ 0.06
USP8-212ENST00000560730 COL4A1P02462 1669 aa15.42■□□□□ 0.06
USP8-212ENST00000560730 RNF181Q9P0P0 153 aa15.42■□□□□ 0.06
USP8-212ENST00000560730 DICER1Q9UPY3 1922 aaKnown RBP15.41■□□□□ 0.06
USP8-212ENST00000560730 GCKRQ14397 625 aa15.41■□□□□ 0.06
USP8-212ENST00000560730 SF3B3Q15393 1217 aaKnown RBP15.41■□□□□ 0.06
USP8-212ENST00000560730 LINS1Q8NG48 757 aa15.41■□□□□ 0.06
USP8-212ENST00000560730 MYH3P11055 1940 aa15.4■□□□□ 0.06
USP8-212ENST00000560730 H7C1W4 665 aa15.4■□□□□ 0.06
USP8-212ENST00000560730 LMNB1P20700 586 aa15.4■□□□□ 0.06
USP8-212ENST00000560730 CCDC93Q567U6 631 aa15.4■□□□□ 0.06
USP8-212ENST00000560730 BEND3Q5T5X7 828 aa15.4■□□□□ 0.06
USP8-212ENST00000560730 SNED1Q8TER0 1413 aa15.39■□□□□ 0.05
USP8-212ENST00000560730 PPEF1O14829 653 aaPredicted RBP15.39■□□□□ 0.05
USP8-212ENST00000560730 ALDH1L2Q3SY69 923 aa15.39■□□□□ 0.05
USP8-212ENST00000560730 SOGA3Q5TF21 947 aa15.39■□□□□ 0.05
USP8-212ENST00000560730 DDX46Q7L014 1031 aaKnown RBP15.39■□□□□ 0.05
USP8-212ENST00000560730 UBE3BQ7Z3V4 1068 aa15.39■□□□□ 0.05
USP8-212ENST00000560730 ZNF526Q8TF50 670 aaPredicted RBP15.39■□□□□ 0.05
USP8-212ENST00000560730 CDHR2Q9BYE9 1310 aa15.39■□□□□ 0.05
USP8-212ENST00000560730 LTBP3Q9NS15 1303 aa15.39■□□□□ 0.05
USP8-212ENST00000560730 PDE8AO60658 829 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms