RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 MAP1SQ66K74 1059 aaPredicted RBP15.96■□□□□ 0.15
MARK3-221ENST00000560603 MIS18AQ9NYP9 233 aa15.96■□□□□ 0.15
MARK3-221ENST00000560603 ABT1Q9ULW3 272 aaKnown RBP15.96■□□□□ 0.15
MARK3-221ENST00000560603 RRP7AQ9Y3A4 280 aaKnown RBP15.96■□□□□ 0.15
MARK3-221ENST00000560603 GJA3Q9Y6H8 435 aa15.96■□□□□ 0.15
MARK3-221ENST00000560603 HOXA10P31260 410 aaPredicted RBP15.95■□□□□ 0.14
MARK3-221ENST00000560603 NUTM1Q86Y26 1132 aa15.95■□□□□ 0.14
MARK3-221ENST00000560603 LARGE2Q8N3Y3 721 aa15.95■□□□□ 0.14
MARK3-221ENST00000560603 RBM17Q96I25 401 aaKnown RBP15.95■□□□□ 0.14
MARK3-221ENST00000560603 ABCC12Q96J65 1359 aa15.94■□□□□ 0.14
MARK3-221ENST00000560603 IBTKQ9P2D0 1353 aaPredicted RBP15.94■□□□□ 0.14
MARK3-221ENST00000560603 ADAMTSL1Q8N6G6 1762 aa15.94■□□□□ 0.14
MARK3-221ENST00000560603 RIC1Q4ADV7 1423 aa15.94■□□□□ 0.14
MARK3-221ENST00000560603 LAMB4A4D0S4 1761 aa15.93■□□□□ 0.14
MARK3-221ENST00000560603 GPTP24298 496 aa15.93■□□□□ 0.14
MARK3-221ENST00000560603 LBX1P52954 281 aa15.93■□□□□ 0.14
MARK3-221ENST00000560603 CRAMP1Q96RY5 1269 aa15.93■□□□□ 0.14
MARK3-221ENST00000560603 PNNQ9H307 717 aaKnown RBP15.93■□□□□ 0.14
MARK3-221ENST00000560603 DDX21Q9NR30 783 aaKnown RBP eCLIP15.93■□□□□ 0.14
MARK3-221ENST00000560603 WDR33Q9C0J8 1336 aaKnown RBP15.93■□□□□ 0.14
MARK3-221ENST00000560603 PPEF1O14829 653 aaPredicted RBP15.92■□□□□ 0.14
MARK3-221ENST00000560603 MYL6BP14649 208 aa15.92■□□□□ 0.14
MARK3-221ENST00000560603 ECE1P42892 770 aa15.92■□□□□ 0.14
MARK3-221ENST00000560603 EIF4A1P60842 406 aaKnown RBP15.92■□□□□ 0.14
MARK3-221ENST00000560603 TTLL7Q6ZT98 887 aa15.92■□□□□ 0.14
MARK3-221ENST00000560603 PPP1R42Q7Z4L9 355 aa15.92■□□□□ 0.14
MARK3-221ENST00000560603 NIM1KQ8IY84 436 aa15.92■□□□□ 0.14
MARK3-221ENST00000560603 BEGAINQ9BUH8 593 aa15.92■□□□□ 0.14
MARK3-221ENST00000560603 ZBTB3Q9H5J0 574 aa15.92■□□□□ 0.14
MARK3-221ENST00000560603 SNED1Q8TER0 1413 aa15.92■□□□□ 0.14
MARK3-221ENST00000560603 ERBB4Q15303 1308 aa15.92■□□□□ 0.14
MARK3-221ENST00000560603 PARP10Q53GL7 1025 aa15.91■□□□□ 0.14
MARK3-221ENST00000560603 USP50Q70EL3 339 aaPredicted RBP15.91■□□□□ 0.14
MARK3-221ENST00000560603 VPS33BQ9H267 617 aa15.91■□□□□ 0.14
MARK3-221ENST00000560603 NUP98P52948 1817 aa15.91■□□□□ 0.14
MARK3-221ENST00000560603 HSPA8P11142 646 aaKnown RBP15.9■□□□□ 0.14
MARK3-221ENST00000560603 NFE2L2Q16236 605 aa15.9■□□□□ 0.14
MARK3-221ENST00000560603 SUSD4Q5VX71 490 aa15.9■□□□□ 0.14
MARK3-221ENST00000560603 GIGYF2Q6Y7W6 1299 aaKnown RBP15.9■□□□□ 0.14
MARK3-221ENST00000560603 PAXIP1Q6ZW49 1069 aaPredicted RBP15.9■□□□□ 0.14
MARK3-221ENST00000560603 NLRP3Q96P20 1036 aa15.9■□□□□ 0.14
MARK3-221ENST00000560603 UBN2Q6ZU65 1347 aa15.9■□□□□ 0.14
MARK3-221ENST00000560603 TCERG1O14776 1098 aaKnown RBP15.89■□□□□ 0.13
MARK3-221ENST00000560603 PPIP5K2O43314 1243 aa15.89■□□□□ 0.13
MARK3-221ENST00000560603 EPS15P42566 896 aa15.89■□□□□ 0.13
MARK3-221ENST00000560603 SCNN1DP51172 638 aa15.89■□□□□ 0.13
MARK3-221ENST00000560603 ZNF34Q8IZ26 560 aa15.89■□□□□ 0.13
MARK3-221ENST00000560603 SUPT20HQ8NEM7 779 aa15.89■□□□□ 0.13
MARK3-221ENST00000560603 MAPK8IP3Q9UPT6 1336 aa15.89■□□□□ 0.13
MARK3-221ENST00000560603 KDM3BQ7LBC6 1761 aa15.88■□□□□ 0.13
MARK3-221ENST00000560603 NTSR2O95665 410 aa15.88■□□□□ 0.13
MARK3-221ENST00000560603 CAPNS2Q96L46 248 aa15.88■□□□□ 0.13
MARK3-221ENST00000560603 ADARB2Q9NS39 739 aaKnown RBP15.88■□□□□ 0.13
MARK3-221ENST00000560603 UTP14AQ9BVJ6 771 aaKnown RBP15.87■□□□□ 0.13
MARK3-221ENST00000560603 ATP6V0A2Q9Y487 856 aa15.87■□□□□ 0.13
MARK3-221ENST00000560603 GPR101Q96P66 508 aaPredicted RBP15.86■□□□□ 0.13
MARK3-221ENST00000560603 PLEKHF1Q96S99 279 aa15.86■□□□□ 0.13
MARK3-221ENST00000560603 TSPYL4Q9UJ04 414 aa15.86■□□□□ 0.13
MARK3-221ENST00000560603 DLG5Q8TDM6 1919 aa15.86■□□□□ 0.13
MARK3-221ENST00000560603 COL4A5P29400 1685 aa15.86■□□□□ 0.13
MARK3-221ENST00000560603 BBOX1O75936 387 aa15.85■□□□□ 0.13
MARK3-221ENST00000560603 GRM1Q13255 1194 aa15.85■□□□□ 0.13
MARK3-221ENST00000560603 AOC3Q16853 763 aa15.85■□□□□ 0.13
MARK3-221ENST00000560603 HSP90AB3PQ58FF7 597 aa15.85■□□□□ 0.13
MARK3-221ENST00000560603 SLC10A5Q5PT55 438 aa15.85■□□□□ 0.13
MARK3-221ENST00000560603 ABHD8Q96I13 439 aa15.85■□□□□ 0.13
MARK3-221ENST00000560603 THUMPD2Q9BTF0 503 aaKnown RBP15.85■□□□□ 0.13
MARK3-221ENST00000560603 GPRC5DQ9NZD1 345 aa15.85■□□□□ 0.13
MARK3-221ENST00000560603 ZNRF3Q9ULT6 936 aa15.85■□□□□ 0.13
MARK3-221ENST00000560603 MAP2K2P36507 400 aa15.84■□□□□ 0.13
MARK3-221ENST00000560603 CYP4F22Q6NT55 531 aa15.84■□□□□ 0.13
MARK3-221ENST00000560603 DPP8Q6V1X1 898 aaPredicted RBP15.84■□□□□ 0.13
MARK3-221ENST00000560603 TLL2Q9Y6L7 1015 aa15.84■□□□□ 0.13
MARK3-221ENST00000560603 LTBP1Q14766 1721 aa15.83■□□□□ 0.13
MARK3-221ENST00000560603 TRPM7Q96QT4 1865 aa15.83■□□□□ 0.12
MARK3-221ENST00000560603 TRAF5O00463 557 aa15.83■□□□□ 0.12
MARK3-221ENST00000560603 EIF2S2P20042 333 aaKnown RBP15.83■□□□□ 0.12
MARK3-221ENST00000560603 CXCL9Q07325 125 aa15.83■□□□□ 0.12
MARK3-221ENST00000560603 TNIP1Q15025 636 aa15.83■□□□□ 0.12
MARK3-221ENST00000560603 CST9Q5W186 159 aa15.83■□□□□ 0.12
MARK3-221ENST00000560603 C3orf67Q6ZVT6 689 aa15.83■□□□□ 0.12
MARK3-221ENST00000560603 MPNDQ8N594 471 aa15.83■□□□□ 0.12
MARK3-221ENST00000560603 BCL2L13Q9BXK5 485 aa15.83■□□□□ 0.12
MARK3-221ENST00000560603 RTFDC1Q9BY42 306 aaPredicted RBP15.83■□□□□ 0.12
MARK3-221ENST00000560603 BABAM1Q9NWV8 329 aa15.83■□□□□ 0.12
MARK3-221ENST00000560603 CDHR2Q9BYE9 1310 aa15.83■□□□□ 0.12
MARK3-221ENST00000560603 CA12O43570 354 aa15.82■□□□□ 0.12
MARK3-221ENST00000560603 FMR1Q06787 632 aaKnown RBP eCLIP15.82■□□□□ 0.12
MARK3-221ENST00000560603 CIAPIN1Q6FI81 312 aa15.82■□□□□ 0.12
MARK3-221ENST00000560603 DDX46Q7L014 1031 aaKnown RBP15.82■□□□□ 0.12
MARK3-221ENST00000560603 SP8Q8IXZ3 490 aa15.82■□□□□ 0.12
MARK3-221ENST00000560603 ABCC4O15439 1325 aa15.82■□□□□ 0.12
MARK3-221ENST00000560603 CELF2O95319 508 aaKnown RBP15.81■□□□□ 0.12
MARK3-221ENST00000560603 GMPSP49915 693 aaPredicted RBP15.81■□□□□ 0.12
MARK3-221ENST00000560603 LMOD3Q0VAK6 560 aa15.81■□□□□ 0.12
MARK3-221ENST00000560603 TMC4Q7Z404 712 aa15.81■□□□□ 0.12
MARK3-221ENST00000560603 ZC3H15Q8WU90 426 aaKnown RBP15.81■□□□□ 0.12
MARK3-221ENST00000560603 HHIPL1Q96JK4 782 aa15.81■□□□□ 0.12
MARK3-221ENST00000560603 THSD7BQ9C0I4 1608 aa15.8■□□□□ 0.12
MARK3-221ENST00000560603 KIAA2012Q0VF49 1180 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms