RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 MEIS3Q99687 375 aa17.19■□□□□ 0.34
HMBOX1-213ENST00000560269 GRM8O00222 908 aa17.18■□□□□ 0.34
HMBOX1-213ENST00000560269 GPTP24298 496 aa17.18■□□□□ 0.34
HMBOX1-213ENST00000560269 TBC1D9BQ66K14 1250 aa17.18■□□□□ 0.34
HMBOX1-213ENST00000560269 NIP7Q9Y221 180 aaKnown RBP eCLIP17.18■□□□□ 0.34
HMBOX1-213ENST00000560269 H7C1W4 665 aa17.17■□□□□ 0.34
HMBOX1-213ENST00000560269 NBPF7P0C2Y1 421 aaPredicted RBP17.17■□□□□ 0.34
HMBOX1-213ENST00000560269 CASP7P55210 303 aa17.17■□□□□ 0.34
HMBOX1-213ENST00000560269 C9orf78Q9NZ63 289 aaPredicted RBP17.17■□□□□ 0.34
HMBOX1-213ENST00000560269 MSH5O43196 834 aa17.16■□□□□ 0.34
HMBOX1-213ENST00000560269 PCCAP05165 728 aaPredicted RBP17.16■□□□□ 0.34
HMBOX1-213ENST00000560269 UBTFL1P0CB47 393 aaPredicted RBP17.16■□□□□ 0.34
HMBOX1-213ENST00000560269 TM4SF1P30408 202 aa17.16■□□□□ 0.34
HMBOX1-213ENST00000560269 SUSD4Q5VX71 490 aa17.16■□□□□ 0.34
HMBOX1-213ENST00000560269 NFIXQ14938 502 aa17.15■□□□□ 0.34
HMBOX1-213ENST00000560269 NLGN1Q8N2Q7 840 aa17.15■□□□□ 0.34
HMBOX1-213ENST00000560269 ZBTB38Q8NAP3 1195 aaPredicted RBP17.15■□□□□ 0.34
HMBOX1-213ENST00000560269 SETDB2Q96T68 719 aa17.15■□□□□ 0.34
HMBOX1-213ENST00000560269 HDAC5Q9UQL6 1122 aa17.15■□□□□ 0.34
HMBOX1-213ENST00000560269 CASZ1Q86V15 1759 aa17.15■□□□□ 0.34
HMBOX1-213ENST00000560269 NTSR2O95665 410 aa17.14■□□□□ 0.33
HMBOX1-213ENST00000560269 GNAI2P04899 355 aa17.14■□□□□ 0.33
HMBOX1-213ENST00000560269 PPP1R42Q7Z4L9 355 aa17.14■□□□□ 0.33
HMBOX1-213ENST00000560269 UTP14AQ9BVJ6 771 aaKnown RBP17.14■□□□□ 0.33
HMBOX1-213ENST00000560269 CDHR2Q9BYE9 1310 aa17.14■□□□□ 0.33
HMBOX1-213ENST00000560269 CARMIL3Q8ND23 1372 aa17.14■□□□□ 0.33
HMBOX1-213ENST00000560269 LAMB2P55268 1798 aa17.13■□□□□ 0.33
HMBOX1-213ENST00000560269 BICDL1Q6ZP65 573 aa17.13■□□□□ 0.33
HMBOX1-213ENST00000560269 UBE3BQ7Z3V4 1068 aa17.13■□□□□ 0.33
HMBOX1-213ENST00000560269 SLC16A10Q8TF71 515 aa17.13■□□□□ 0.33
HMBOX1-213ENST00000560269 TRMT112Q9UI30 125 aaKnown RBP17.13■□□□□ 0.33
HMBOX1-213ENST00000560269 GTF3C3Q9Y5Q9 886 aa17.13■□□□□ 0.33
HMBOX1-213ENST00000560269 FAM89AQ96GI7 184 aa17.12■□□□□ 0.33
HMBOX1-213ENST00000560269 SUCLG2Q96I99 432 aa17.12■□□□□ 0.33
HMBOX1-213ENST00000560269 NYXQ9GZU5 481 aa17.12■□□□□ 0.33
HMBOX1-213ENST00000560269 LRRFIP2Q9Y608 721 aaKnown RBP17.12■□□□□ 0.33
HMBOX1-213ENST00000560269 NRXN2Q9P2S2 1712 aa17.12■□□□□ 0.33
HMBOX1-213ENST00000560269 DDX60Q8IY21 1712 aaKnown RBP17.11■□□□□ 0.33
HMBOX1-213ENST00000560269 JARID2Q92833 1246 aaPredicted RBP17.11■□□□□ 0.33
HMBOX1-213ENST00000560269 KAZALD1Q96I82 304 aa17.11■□□□□ 0.33
HMBOX1-213ENST00000560269 PDGFDQ9GZP0 370 aaPredicted RBP17.11■□□□□ 0.33
HMBOX1-213ENST00000560269 C1orf115Q9H7X2 142 aa17.11■□□□□ 0.33
HMBOX1-213ENST00000560269 PCDHB15Q9Y5E8 787 aa17.11■□□□□ 0.33
HMBOX1-213ENST00000560269 SH3TC1Q8TE82 1336 aa17.11■□□□□ 0.33
HMBOX1-213ENST00000560269 FAM177BA6PVY3 158 aa17.1■□□□□ 0.33
HMBOX1-213ENST00000560269 POLRMTO00411 1230 aaKnown RBP17.1■□□□□ 0.33
HMBOX1-213ENST00000560269 DDR1Q08345 913 aa17.1■□□□□ 0.33
HMBOX1-213ENST00000560269 R3HDM1Q15032 1099 aaKnown RBP17.1■□□□□ 0.33
HMBOX1-213ENST00000560269 RPAP2Q8IXW5 612 aaPredicted RBP17.1■□□□□ 0.33
HMBOX1-213ENST00000560269 PLA2G12BQ9BX93 195 aa17.1■□□□□ 0.33
HMBOX1-213ENST00000560269 PPP4R2Q9NY27 417 aa17.1■□□□□ 0.33
HMBOX1-213ENST00000560269 RTL5Q5HYW3 569 aaPredicted RBP17.09■□□□□ 0.33
HMBOX1-213ENST00000560269 TPTE2Q6XPS3 522 aa17.09■□□□□ 0.33
HMBOX1-213ENST00000560269 NBPF5PQ86XG9 351 aaPredicted RBP17.09■□□□□ 0.33
HMBOX1-213ENST00000560269 SYNE4Q8N205 404 aa17.09■□□□□ 0.33
HMBOX1-213ENST00000560269 MYH3P11055 1940 aa17.09■□□□□ 0.33
HMBOX1-213ENST00000560269 IRS4O14654 1257 aaPredicted RBP17.08■□□□□ 0.32
HMBOX1-213ENST00000560269 SERPINB2P05120 415 aa17.08■□□□□ 0.32
HMBOX1-213ENST00000560269 HSP90B1P14625 803 aaKnown RBP17.08■□□□□ 0.32
HMBOX1-213ENST00000560269 FOXO4P98177 505 aa17.08■□□□□ 0.32
HMBOX1-213ENST00000560269 MTX1Q13505 466 aa17.08■□□□□ 0.32
HMBOX1-213ENST00000560269 RABL6Q3YEC7 729 aaPredicted RBP17.08■□□□□ 0.32
HMBOX1-213ENST00000560269 EPHA10Q5JZY3 1008 aa17.08■□□□□ 0.32
HMBOX1-213ENST00000560269 SLC10A5Q5PT55 438 aa17.08■□□□□ 0.32
HMBOX1-213ENST00000560269 CEP85Q6P2H3 762 aa17.08■□□□□ 0.32
HMBOX1-213ENST00000560269 ANKRD44Q8N8A2 993 aa17.08■□□□□ 0.32
HMBOX1-213ENST00000560269 RIC1Q4ADV7 1423 aa17.07■□□□□ 0.32
HMBOX1-213ENST00000560269 MMP10P09238 476 aa17.07■□□□□ 0.32
HMBOX1-213ENST00000560269 ATP8B2P98198 1209 aa17.07■□□□□ 0.32
HMBOX1-213ENST00000560269 ERFEQ4G0M1 354 aa17.07■□□□□ 0.32
HMBOX1-213ENST00000560269 MSL1Q68DK7 614 aa17.07■□□□□ 0.32
HMBOX1-213ENST00000560269 NUTM1Q86Y26 1132 aa17.07■□□□□ 0.32
HMBOX1-213ENST00000560269 SIRT2Q8IXJ6 389 aa17.07■□□□□ 0.32
HMBOX1-213ENST00000560269 BICC1Q9H694 974 aaKnown RBP17.07■□□□□ 0.32
HMBOX1-213ENST00000560269 ABCC12Q96J65 1359 aa17.06■□□□□ 0.32
HMBOX1-213ENST00000560269 PDE8AO60658 829 aa17.06■□□□□ 0.32
HMBOX1-213ENST00000560269 PRR5LQ6MZQ0 368 aa17.06■□□□□ 0.32
HMBOX1-213ENST00000560269 CNBD1Q8NA66 436 aa17.06■□□□□ 0.32
HMBOX1-213ENST00000560269 CSF1RP07333 972 aa17.05■□□□□ 0.32
HMBOX1-213ENST00000560269 GTF2E1P29083 439 aaPredicted RBP17.05■□□□□ 0.32
HMBOX1-213ENST00000560269 HDAC1Q13547 482 aaPredicted RBP17.05■□□□□ 0.32
HMBOX1-213ENST00000560269 PARP3Q9Y6F1 533 aa17.05■□□□□ 0.32
HMBOX1-213ENST00000560269 PSDA5PKW4 1024 aaPredicted RBP17.04■□□□□ 0.32
HMBOX1-213ENST00000560269 HCLS1P14317 486 aaPredicted RBP17.04■□□□□ 0.32
HMBOX1-213ENST00000560269 LMBR1LQ6UX01 489 aa17.04■□□□□ 0.32
HMBOX1-213ENST00000560269 MTFR1LQ9H019 292 aa17.04■□□□□ 0.32
HMBOX1-213ENST00000560269 TNRC6CQ9HCJ0 1690 aaKnown RBP17.04■□□□□ 0.32
HMBOX1-213ENST00000560269 PNMA6EA0A0J9YXQ4 647 aa17.03■□□□□ 0.32
HMBOX1-213ENST00000560269 HMMRO75330 724 aa17.03■□□□□ 0.32
HMBOX1-213ENST00000560269 CTSWP56202 376 aa17.03■□□□□ 0.32
HMBOX1-213ENST00000560269 ST5P78524 1137 aa17.03■□□□□ 0.32
HMBOX1-213ENST00000560269 POLA2Q14181 598 aa17.03■□□□□ 0.32
HMBOX1-213ENST00000560269 TTLL11Q8NHH1 800 aa17.03■□□□□ 0.32
HMBOX1-213ENST00000560269 SSH3Q8TE77 659 aa17.03■□□□□ 0.32
HMBOX1-213ENST00000560269 RWDD1Q9H446 243 aaPredicted RBP17.03■□□□□ 0.32
HMBOX1-213ENST00000560269 ANKRD31Q8N7Z5 1873 aa17.02■□□□□ 0.32
HMBOX1-213ENST00000560269 NPHP1O15259 732 aa17.02■□□□□ 0.32
HMBOX1-213ENST00000560269 SF3B3Q15393 1217 aaKnown RBP17.02■□□□□ 0.32
HMBOX1-213ENST00000560269 CCDC136Q96JN2 1154 aa17.02■□□□□ 0.32
HMBOX1-213ENST00000560269 SOCS7O14512 581 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms